RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 CIITAP33076 1130 aa17.27■□□□□ 0.36
COL16A1-211ENST00000479100 CPT1AP50416 773 aa17.27■□□□□ 0.36
COL16A1-211ENST00000479100 SP4Q02446 784 aa17.27■□□□□ 0.36
COL16A1-211ENST00000479100 LAMC2Q13753 1193 aa17.27■□□□□ 0.36
COL16A1-211ENST00000479100 NEDD9Q14511 834 aa17.27■□□□□ 0.36
COL16A1-211ENST00000479100 CELF3Q5SZQ8 465 aaKnown RBP17.27■□□□□ 0.36
COL16A1-211ENST00000479100 NIPA1Q7RTP0 329 aa17.27■□□□□ 0.36
COL16A1-211ENST00000479100 NEK8Q86SG6 692 aa17.27■□□□□ 0.36
COL16A1-211ENST00000479100 KLHDC9Q8NEP7 349 aa17.27■□□□□ 0.36
COL16A1-211ENST00000479100 AFG1LQ8WV93 481 aa17.27■□□□□ 0.36
COL16A1-211ENST00000479100 LRCH3Q96II8 777 aa17.27■□□□□ 0.36
COL16A1-211ENST00000479100 SPATA33Q96N06 139 aa17.27■□□□□ 0.36
COL16A1-211ENST00000479100 FOXP1Q9H334 677 aaPredicted RBP17.27■□□□□ 0.36
COL16A1-211ENST00000479100 BCAS3Q9H6U6 928 aa17.27■□□□□ 0.36
COL16A1-211ENST00000479100 MYH7BA7E2Y1 1941 aa17.26■□□□□ 0.35
COL16A1-211ENST00000479100 IGLV3-22A0A075B6J6 115 aa17.26■□□□□ 0.35
COL16A1-211ENST00000479100 CTAGE5O15320 804 aa17.26■□□□□ 0.35
COL16A1-211ENST00000479100 MAFGO15525 162 aa17.26■□□□□ 0.35
COL16A1-211ENST00000479100 EDIL3O43854 480 aa17.26■□□□□ 0.35
COL16A1-211ENST00000479100 CCNT1O60563 726 aaKnown RBP17.26■□□□□ 0.35
COL16A1-211ENST00000479100 MYL3P08590 195 aa17.26■□□□□ 0.35
COL16A1-211ENST00000479100 SETQ01105 290 aaPredicted RBP17.26■□□□□ 0.35
COL16A1-211ENST00000479100 MYSM1Q5VVJ2 828 aa17.26■□□□□ 0.35
COL16A1-211ENST00000479100 PCSK9Q8NBP7 692 aaKnown RBP17.26■□□□□ 0.35
COL16A1-211ENST00000479100 GIMAP8Q8ND71 665 aaPredicted RBP17.26■□□□□ 0.35
COL16A1-211ENST00000479100 VTI1AQ96AJ9 217 aa17.26■□□□□ 0.35
COL16A1-211ENST00000479100 SENP7Q9BQF6 1050 aa17.26■□□□□ 0.35
COL16A1-211ENST00000479100 AGO4Q9HCK5 861 aaKnown RBP17.26■□□□□ 0.35
COL16A1-211ENST00000479100 FRMPD3Q5JV73 1810 aa17.26■□□□□ 0.35
COL16A1-211ENST00000479100 KIF28PB7ZC32 967 aa17.25■□□□□ 0.35
COL16A1-211ENST00000479100 NOP56O00567 594 aaKnown RBP17.25■□□□□ 0.35
COL16A1-211ENST00000479100 ASGR1P07306 291 aa17.25■□□□□ 0.35
COL16A1-211ENST00000479100 KCNA2P16389 499 aa17.25■□□□□ 0.35
COL16A1-211ENST00000479100 CST5P28325 142 aaPredicted RBP17.25■□□□□ 0.35
COL16A1-211ENST00000479100 ACLYP53396 1101 aa17.25■□□□□ 0.35
COL16A1-211ENST00000479100 LRIT3Q3SXY7 679 aa17.25■□□□□ 0.35
COL16A1-211ENST00000479100 NOSTRINQ8IVI9 506 aa17.25■□□□□ 0.35
COL16A1-211ENST00000479100 SDF4Q9BRK5 362 aa17.25■□□□□ 0.35
COL16A1-211ENST00000479100 ZNF577Q9BSK1 485 aa17.25■□□□□ 0.35
COL16A1-211ENST00000479100 TSEN34Q9BSV6 310 aaKnown RBP17.25■□□□□ 0.35
COL16A1-211ENST00000479100 DDX25Q9UHL0 483 aaKnown RBP17.25■□□□□ 0.35
COL16A1-211ENST00000479100 DDX39AO00148 427 aaKnown RBP17.24■□□□□ 0.35
COL16A1-211ENST00000479100 MARCH6O60337 910 aa17.24■□□□□ 0.35
COL16A1-211ENST00000479100 ATN1P54259 1190 aaPredicted RBP17.24■□□□□ 0.35
COL16A1-211ENST00000479100 CHMP4BP1P59074 171 aa17.24■□□□□ 0.35
COL16A1-211ENST00000479100 SNX17Q15036 470 aa17.24■□□□□ 0.35
COL16A1-211ENST00000479100 METTL7BQ6UX53 244 aa17.24■□□□□ 0.35
COL16A1-211ENST00000479100 CXCL17Q6UXB2 119 aa17.24■□□□□ 0.35
COL16A1-211ENST00000479100 TDHQ8IZJ6 230 aa17.24■□□□□ 0.35
COL16A1-211ENST00000479100 EMID1Q96A84 441 aaPredicted RBP17.24■□□□□ 0.35
COL16A1-211ENST00000479100 NAP1L4Q99733 375 aaKnown RBP17.24■□□□□ 0.35
COL16A1-211ENST00000479100 POLR3EQ9NVU0 708 aa17.24■□□□□ 0.35
COL16A1-211ENST00000479100 NOL7Q9UMY1 257 aaKnown RBP17.24■□□□□ 0.35
COL16A1-211ENST00000479100 PHF24Q9UPV7 400 aa17.24■□□□□ 0.35
COL16A1-211ENST00000479100 CYP3A7-CYP3A51PA0A087WV96 503 aa17.23■□□□□ 0.35
COL16A1-211ENST00000479100 A0A1W2PQ45 241 aaPredicted RBP17.23■□□□□ 0.35
COL16A1-211ENST00000479100 A0A1W2PQY0 241 aa17.23■□□□□ 0.35
COL16A1-211ENST00000479100 MOXD2PA6NHM9 499 aa17.23■□□□□ 0.35
COL16A1-211ENST00000479100 A6NJR5 290 aa17.23■□□□□ 0.35
COL16A1-211ENST00000479100 IPO5O00410 1097 aaKnown RBP17.23■□□□□ 0.35
COL16A1-211ENST00000479100 MSH4O15457 936 aa17.23■□□□□ 0.35
COL16A1-211ENST00000479100 MMP3P08254 477 aa17.23■□□□□ 0.35
COL16A1-211ENST00000479100 GCFC2P16383 781 aaKnown RBP17.23■□□□□ 0.35
COL16A1-211ENST00000479100 SYT1P21579 422 aa17.23■□□□□ 0.35
COL16A1-211ENST00000479100 CYP3A7P24462 503 aa17.23■□□□□ 0.35
COL16A1-211ENST00000479100 U2AF2P26368 475 aaKnown RBP eCLIP17.23■□□□□ 0.35
COL16A1-211ENST00000479100 NKX3-2P78367 333 aa17.23■□□□□ 0.35
COL16A1-211ENST00000479100 ITGB3BPQ13352 177 aaPredicted RBP17.23■□□□□ 0.35
COL16A1-211ENST00000479100 HSDL1Q3SXM5 330 aa17.23■□□□□ 0.35
COL16A1-211ENST00000479100 Q4G0T1 1027 aa17.23■□□□□ 0.35
COL16A1-211ENST00000479100 CCSAPQ6IQ19 270 aaPredicted RBP17.23■□□□□ 0.35
COL16A1-211ENST00000479100 MOXD1Q6UVY6 613 aa17.23■□□□□ 0.35
COL16A1-211ENST00000479100 PPTC7Q8NI37 304 aa17.23■□□□□ 0.35
COL16A1-211ENST00000479100 LENG9Q96B70 501 aa17.23■□□□□ 0.35
COL16A1-211ENST00000479100 TCEAL9Q9UHQ7 104 aa17.23■□□□□ 0.35
COL16A1-211ENST00000479100 COL6A3P12111 3177 aa17.23■□□□□ 0.35
COL16A1-211ENST00000479100 SLC37A4O43826 429 aa17.22■□□□□ 0.35
COL16A1-211ENST00000479100 RTP1P59025 263 aa17.22■□□□□ 0.35
COL16A1-211ENST00000479100 DGKDQ16760 1214 aa17.22■□□□□ 0.35
COL16A1-211ENST00000479100 C1orf53Q5VUE5 145 aa17.22■□□□□ 0.35
COL16A1-211ENST00000479100 PPP4R3AQ6IN85 833 aa17.22■□□□□ 0.35
COL16A1-211ENST00000479100 GPR153Q6NV75 609 aa17.22■□□□□ 0.35
COL16A1-211ENST00000479100 SLC39A5Q6ZMH5 540 aa17.22■□□□□ 0.35
COL16A1-211ENST00000479100 FERMT3Q86UX7 667 aa17.22■□□□□ 0.35
COL16A1-211ENST00000479100 GJA10Q969M2 543 aa17.22■□□□□ 0.35
COL16A1-211ENST00000479100 GLT1D1Q96MS3 346 aa17.22■□□□□ 0.35
COL16A1-211ENST00000479100 MBOAT7Q96N66 472 aa17.22■□□□□ 0.35
COL16A1-211ENST00000479100 UBE2OQ9C0C9 1292 aaKnown RBP17.22■□□□□ 0.35
COL16A1-211ENST00000479100 JPH1Q9HDC5 661 aaPredicted RBP17.22■□□□□ 0.35
COL16A1-211ENST00000479100 SLC9A2Q9UBY0 812 aa17.22■□□□□ 0.35
COL16A1-211ENST00000479100 TELO2Q9Y4R8 837 aa17.22■□□□□ 0.35
COL16A1-211ENST00000479100 NFASCO94856 1347 aa17.21■□□□□ 0.35
COL16A1-211ENST00000479100 KPNA6O60684 536 aa17.21■□□□□ 0.35
COL16A1-211ENST00000479100 MCM7P33993 719 aa17.21■□□□□ 0.35
COL16A1-211ENST00000479100 MDM2Q00987 491 aaPredicted RBP17.21■□□□□ 0.35
COL16A1-211ENST00000479100 ZNF174Q15697 407 aa17.21■□□□□ 0.35
COL16A1-211ENST00000479100 UTP14CQ5TAP6 766 aaKnown RBP17.21■□□□□ 0.35
COL16A1-211ENST00000479100 POTEDQ86YR6 584 aa17.21■□□□□ 0.35
COL16A1-211ENST00000479100 GPR20Q99678 358 aa17.21■□□□□ 0.35
COL16A1-211ENST00000479100 MTG1Q9BT17 334 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms