RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 KCNB1Q14721 858 aa15.56■□□□□ 0.08
CCDC78-210ENST00000478979 PPP2R5AQ15172 486 aa15.56■□□□□ 0.08
CCDC78-210ENST00000478979 ECM1Q16610 540 aa15.56■□□□□ 0.08
CCDC78-210ENST00000478979 FKBP15Q5T1M5 1219 aa15.56■□□□□ 0.08
CCDC78-210ENST00000478979 THAP9Q9H5L6 903 aa15.56■□□□□ 0.08
CCDC78-210ENST00000478979 VEZTQ9HBM0 779 aa15.56■□□□□ 0.08
CCDC78-210ENST00000478979 BLOC1S4Q9NUP1 217 aa15.56■□□□□ 0.08
CCDC78-210ENST00000478979 ODF2LQ9ULJ1 636 aa15.56■□□□□ 0.08
CCDC78-210ENST00000478979 RASSF10A6NK89 507 aa15.55■□□□□ 0.08
CCDC78-210ENST00000478979 DNM2P50570 870 aa15.55■□□□□ 0.08
CCDC78-210ENST00000478979 SLC7A5Q01650 507 aa15.55■□□□□ 0.08
CCDC78-210ENST00000478979 IKQ13123 557 aaPredicted RBP15.55■□□□□ 0.08
CCDC78-210ENST00000478979 IQCEQ6IPM2 695 aa15.55■□□□□ 0.08
CCDC78-210ENST00000478979 MICALCLQ6ZW33 695 aa15.55■□□□□ 0.08
CCDC78-210ENST00000478979 LARP4BQ92615 738 aaKnown RBP15.55■□□□□ 0.08
CCDC78-210ENST00000478979 PNMA5Q96PV4 448 aa15.55■□□□□ 0.08
CCDC78-210ENST00000478979 VCPKMTQ9H867 229 aa15.55■□□□□ 0.08
CCDC78-210ENST00000478979 NHEJ1Q9H9Q4 299 aaPredicted RBP15.55■□□□□ 0.08
CCDC78-210ENST00000478979 JMJD4Q9H9V9 463 aa15.55■□□□□ 0.08
CCDC78-210ENST00000478979 SERPINB13Q9UIV8 391 aa15.55■□□□□ 0.08
CCDC78-210ENST00000478979 AFF2P51816 1311 aa15.55■□□□□ 0.08
CCDC78-210ENST00000478979 COL24A1Q17RW2 1714 aa15.55■□□□□ 0.08
CCDC78-210ENST00000478979 KRT86O43790 486 aa15.55■□□□□ 0.08
CCDC78-210ENST00000478979 HSF2BPO75031 334 aa15.55■□□□□ 0.08
CCDC78-210ENST00000478979 APBA1Q02410 837 aa15.55■□□□□ 0.08
CCDC78-210ENST00000478979 CCDC40Q4G0X9 1142 aa15.55■□□□□ 0.08
CCDC78-210ENST00000478979 C2CD5Q86YS7 1000 aa15.55■□□□□ 0.08
CCDC78-210ENST00000478979 EHBP1Q8NDI1 1231 aa15.55■□□□□ 0.08
CCDC78-210ENST00000478979 ZNHIT6Q9NWK9 470 aaKnown RBP15.55■□□□□ 0.08
CCDC78-210ENST00000478979 KCNG1Q9UIX4 513 aa15.55■□□□□ 0.08
CCDC78-210ENST00000478979 A6NNZ2 444 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 TULP1O00294 542 aaPredicted RBP15.54■□□□□ 0.08
CCDC78-210ENST00000478979 LAD1O00515 517 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 IPO7O95373 1038 aaKnown RBP15.54■□□□□ 0.08
CCDC78-210ENST00000478979 LSP1P33241 339 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 PRPHP41219 470 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 GUCY1A3Q02108 690 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 TMEM266Q2M3C6 531 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 TUBB8Q3ZCM7 444 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 CRY2Q49AN0 593 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 CCDC13Q8IYE1 715 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 CDK5RAP2Q96SN8 1893 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 STAT3P40763 770 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 MATR3P43243 847 aaKnown RBP eCLIP15.54■□□□□ 0.08
CCDC78-210ENST00000478979 SMTNP53814 917 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 USH1GQ495M9 461 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 CEP85LQ5SZL2 805 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 KRT79Q5XKE5 535 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 YTHDF3Q7Z739 585 aaKnown RBP15.54■□□□□ 0.08
CCDC78-210ENST00000478979 SLF2Q8IX21 1173 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 ZNF473Q8WTR7 871 aaKnown RBP15.54■□□□□ 0.08
CCDC78-210ENST00000478979 DDX12PQ92771 950 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 RNPC3Q96LT9 517 aaKnown RBP15.54■□□□□ 0.08
CCDC78-210ENST00000478979 NLRC4Q9NPP4 1024 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 CAPN11Q9UMQ6 739 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 EDIL3O43854 480 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 RASSF9O75901 435 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 BBOX1O75936 387 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 KRT14P02533 472 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 SRGNP10124 158 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 BRD2P25440 801 aaKnown RBP15.54■□□□□ 0.08
CCDC78-210ENST00000478979 AMPD3Q01432 767 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 ARID5AQ03989 594 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 NNTQ13423 1086 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 SF3B2Q13435 895 aaKnown RBP15.54■□□□□ 0.08
CCDC78-210ENST00000478979 DHTKD1Q96HY7 919 aaPredicted RBP15.54■□□□□ 0.08
CCDC78-210ENST00000478979 AK8Q96MA6 479 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 ZIM3Q96PE6 472 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 FGFBP2Q9BYJ0 223 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 EPN3Q9H201 632 aa15.54■□□□□ 0.08
CCDC78-210ENST00000478979 DDX25Q9UHL0 483 aaKnown RBP15.54■□□□□ 0.08
CCDC78-210ENST00000478979 BICDL2A1A5D9 508 aa15.53■□□□□ 0.08
CCDC78-210ENST00000478979 E9PMD0 336 aa15.53■□□□□ 0.08
CCDC78-210ENST00000478979 ECM2O94769 699 aaPredicted RBP15.53■□□□□ 0.08
CCDC78-210ENST00000478979 EPHB4P54760 987 aa15.53■□□□□ 0.08
CCDC78-210ENST00000478979 MIIPQ5JXC2 388 aa15.53■□□□□ 0.08
CCDC78-210ENST00000478979 ALS2CLQ60I27 953 aa15.53■□□□□ 0.08
CCDC78-210ENST00000478979 CNNM4Q6P4Q7 775 aa15.53■□□□□ 0.08
CCDC78-210ENST00000478979 SLC30A10Q6XR72 485 aa15.53■□□□□ 0.08
CCDC78-210ENST00000478979 MMGT1Q8N4V1 131 aa15.53■□□□□ 0.08
CCDC78-210ENST00000478979 ANO9A1A5B4 782 aa15.53■□□□□ 0.08
CCDC78-210ENST00000478979 GDF11O95390 407 aa15.53■□□□□ 0.08
CCDC78-210ENST00000478979 TTLL1O95922 423 aa15.53■□□□□ 0.08
CCDC78-210ENST00000478979 KRT83P78385 493 aa15.53■□□□□ 0.08
CCDC78-210ENST00000478979 TBC1D22AQ8WUA7 517 aa15.53■□□□□ 0.08
CCDC78-210ENST00000478979 RIOX1Q9H6W3 641 aa15.53■□□□□ 0.08
CCDC78-210ENST00000478979 SLC40A1Q9NP59 571 aa15.53■□□□□ 0.08
CCDC78-210ENST00000478979 POLRMTO00411 1230 aaKnown RBP15.52■□□□□ 0.08
CCDC78-210ENST00000478979 IFT88Q13099 833 aa15.52■□□□□ 0.08
CCDC78-210ENST00000478979 WLSQ5T9L3 541 aa15.52■□□□□ 0.08
CCDC78-210ENST00000478979 CDC42EP5Q6NZY7 148 aa15.52■□□□□ 0.08
CCDC78-210ENST00000478979 RRAGAQ7L523 313 aa15.52■□□□□ 0.08
CCDC78-210ENST00000478979 CEP57Q86XR8 500 aa15.52■□□□□ 0.08
CCDC78-210ENST00000478979 CREG2Q8IUH2 290 aa15.52■□□□□ 0.08
CCDC78-210ENST00000478979 DNAJC7Q99615 494 aa15.52■□□□□ 0.08
CCDC78-210ENST00000478979 C7orf25Q9BPX7 421 aa15.52■□□□□ 0.08
CCDC78-210ENST00000478979 PAGR1Q9BTK6 254 aa15.52■□□□□ 0.08
CCDC78-210ENST00000478979 MYH10P35580 1976 aa15.52■□□□□ 0.08
CCDC78-210ENST00000478979 GCFC2P16383 781 aaKnown RBP15.52■□□□□ 0.08
CCDC78-210ENST00000478979 CXCR5P32302 372 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms