RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 CCSER2Q9H7U1 834 aa5.37□□□□□ -1.55
VLDLR-204ENST00000478776 CD248Q9HCU0 757 aa5.37□□□□□ -1.55
VLDLR-204ENST00000478776 MYOTQ9UBF9 498 aa5.37□□□□□ -1.55
VLDLR-204ENST00000478776 INPP5FQ9Y2H2 1132 aa5.37□□□□□ -1.55
VLDLR-204ENST00000478776 OVOL3O00110 214 aa5.36□□□□□ -1.55
VLDLR-204ENST00000478776 ZNF623O75123 536 aa5.36□□□□□ -1.55
VLDLR-204ENST00000478776 TADA3O75528 432 aa5.36□□□□□ -1.55
VLDLR-204ENST00000478776 LRG1P02750 347 aa5.36□□□□□ -1.55
VLDLR-204ENST00000478776 CYP4F3Q08477 520 aa5.36□□□□□ -1.55
VLDLR-204ENST00000478776 EMC4Q5J8M3 183 aa5.36□□□□□ -1.55
VLDLR-204ENST00000478776 ACBD5Q5T8D3 534 aaPredicted RBP5.36□□□□□ -1.55
VLDLR-204ENST00000478776 LARP1BQ659C4 914 aaKnown RBP5.36□□□□□ -1.55
VLDLR-204ENST00000478776 TRIM48Q8IWZ4 208 aa5.36□□□□□ -1.55
VLDLR-204ENST00000478776 Q8N1X5 172 aa5.36□□□□□ -1.55
VLDLR-204ENST00000478776 SMOC1Q9H4F8 434 aa5.36□□□□□ -1.55
VLDLR-204ENST00000478776 SLITRK6Q9H5Y7 841 aa5.36□□□□□ -1.55
VLDLR-204ENST00000478776 HS3ST3A1Q9Y663 406 aa5.36□□□□□ -1.55
VLDLR-204ENST00000478776 FBXO21O94952 628 aa5.35□□□□□ -1.55
VLDLR-204ENST00000478776 SLPIP03973 132 aa5.35□□□□□ -1.55
VLDLR-204ENST00000478776 SCG5P05408 212 aa5.35□□□□□ -1.55
VLDLR-204ENST00000478776 PRSS53Q2L4Q9 553 aa5.35□□□□□ -1.55
VLDLR-204ENST00000478776 VASNQ6EMK4 673 aa5.35□□□□□ -1.55
VLDLR-204ENST00000478776 C6orf15Q6UXA7 325 aaPredicted RBP5.35□□□□□ -1.55
VLDLR-204ENST00000478776 ZNF227Q86WZ6 799 aa5.35□□□□□ -1.55
VLDLR-204ENST00000478776 DNERQ8NFT8 737 aa5.35□□□□□ -1.55
VLDLR-204ENST00000478776 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.35□□□□□ -1.55
VLDLR-204ENST00000478776 ZCCHC14Q8WYQ9 949 aaKnown RBP5.35□□□□□ -1.55
VLDLR-204ENST00000478776 MENTQ9BUN1 341 aa5.35□□□□□ -1.55
VLDLR-204ENST00000478776 ZNF341Q9BYN7 854 aa5.35□□□□□ -1.55
VLDLR-204ENST00000478776 CAPN10Q9HC96 672 aa5.35□□□□□ -1.55
VLDLR-204ENST00000478776 FBXL7Q9UJT9 491 aa5.35□□□□□ -1.55
VLDLR-204ENST00000478776 TBX1O43435 398 aa5.34□□□□□ -1.55
VLDLR-204ENST00000478776 DDAH1O94760 285 aa5.34□□□□□ -1.55
VLDLR-204ENST00000478776 RALYLQ86SE5 291 aaKnown RBP5.34□□□□□ -1.55
VLDLR-204ENST00000478776 FAM178BQ8IXR5 827 aa5.34□□□□□ -1.55
VLDLR-204ENST00000478776 KREMEN2Q8NCW0 462 aa5.34□□□□□ -1.55
VLDLR-204ENST00000478776 PTPN18Q99952 460 aa5.34□□□□□ -1.55
VLDLR-204ENST00000478776 ACTR10Q9NZ32 417 aa5.34□□□□□ -1.55
VLDLR-204ENST00000478776 PATE3B3GLJ2 98 aa5.33□□□□□ -1.56
VLDLR-204ENST00000478776 AGRPO00253 132 aa5.33□□□□□ -1.56
VLDLR-204ENST00000478776 ARNTLO00327 626 aa5.33□□□□□ -1.56
VLDLR-204ENST00000478776 LCP1P13796 627 aa5.33□□□□□ -1.56
VLDLR-204ENST00000478776 SF1Q15637 639 aaKnown RBP5.33□□□□□ -1.56
VLDLR-204ENST00000478776 TNNI3KQ59H18 835 aa5.33□□□□□ -1.56
VLDLR-204ENST00000478776 SPDYAQ5MJ70 313 aa5.33□□□□□ -1.56
VLDLR-204ENST00000478776 IFNL2Q8IZJ0 200 aa5.33□□□□□ -1.56
VLDLR-204ENST00000478776 GIMAP8Q8ND71 665 aaPredicted RBP5.33□□□□□ -1.56
VLDLR-204ENST00000478776 DLL4Q9NR61 685 aa5.33□□□□□ -1.56
VLDLR-204ENST00000478776 ADAM29Q9UKF5 820 aa5.33□□□□□ -1.56
VLDLR-204ENST00000478776 TESMINQ9Y4I5 508 aa5.33□□□□□ -1.56
VLDLR-204ENST00000478776 NUB1Q9Y5A7 615 aa5.33□□□□□ -1.56
VLDLR-204ENST00000478776 SMAD7O15105 426 aaKnown RBP5.32□□□□□ -1.56
VLDLR-204ENST00000478776 SUSD5O60279 629 aa5.32□□□□□ -1.56
VLDLR-204ENST00000478776 SSBP05455 408 aaKnown RBP eCLIP5.32□□□□□ -1.56
VLDLR-204ENST00000478776 GFRA1P56159 465 aa5.32□□□□□ -1.56
VLDLR-204ENST00000478776 GRIN1Q05586 938 aa5.32□□□□□ -1.56
VLDLR-204ENST00000478776 TESK1Q15569 626 aa5.32□□□□□ -1.56
VLDLR-204ENST00000478776 SMAD2Q15796 467 aaKnown RBP5.32□□□□□ -1.56
VLDLR-204ENST00000478776 ZNF568Q3ZCX4 644 aa5.32□□□□□ -1.56
VLDLR-204ENST00000478776 CYP4F22Q6NT55 531 aa5.32□□□□□ -1.56
VLDLR-204ENST00000478776 VPS37DQ86XT2 251 aa5.32□□□□□ -1.56
VLDLR-204ENST00000478776 TMEM145Q8NBT3 493 aa5.32□□□□□ -1.56
VLDLR-204ENST00000478776 NUDT10Q8NFP7 164 aa5.32□□□□□ -1.56
VLDLR-204ENST00000478776 Q8TCH9 128 aa5.32□□□□□ -1.56
VLDLR-204ENST00000478776 NUDT11Q96G61 164 aa5.32□□□□□ -1.56
VLDLR-204ENST00000478776 TINF2Q9BSI4 451 aa5.32□□□□□ -1.56
VLDLR-204ENST00000478776 SEC61A2Q9H9S3 476 aa5.32□□□□□ -1.56
VLDLR-204ENST00000478776 ASH2LQ9UBL3 628 aa5.32□□□□□ -1.56
VLDLR-204ENST00000478776 MRVI1Q9Y6F6 885 aa5.32□□□□□ -1.56
VLDLR-204ENST00000478776 CHGBP05060 677 aa5.31□□□□□ -1.56
VLDLR-204ENST00000478776 PRKD1Q15139 912 aaPredicted RBP5.31□□□□□ -1.56
VLDLR-204ENST00000478776 FXNQ16595 210 aa5.31□□□□□ -1.56
VLDLR-204ENST00000478776 PHF19Q5T6S3 580 aa5.31□□□□□ -1.56
VLDLR-204ENST00000478776 Q6ZUG5 572 aa5.31□□□□□ -1.56
VLDLR-204ENST00000478776 KCTD13Q8WZ19 329 aa5.31□□□□□ -1.56
VLDLR-204ENST00000478776 WWC2-AS2Q96NR7 200 aa5.31□□□□□ -1.56
VLDLR-204ENST00000478776 LMF1Q96S06 567 aa5.31□□□□□ -1.56
VLDLR-204ENST00000478776 JAM3Q9BX67 310 aa5.31□□□□□ -1.56
VLDLR-204ENST00000478776 PCED1AQ9H1Q7 454 aa5.31□□□□□ -1.56
VLDLR-204ENST00000478776 SLC6A20Q9NP91 592 aa5.31□□□□□ -1.56
VLDLR-204ENST00000478776 HSPBP1Q9NZL4 362 aa5.31□□□□□ -1.56
VLDLR-204ENST00000478776 RBPJLQ9UBG7 517 aa5.31□□□□□ -1.56
VLDLR-204ENST00000478776 SLC27A2O14975 620 aa5.3□□□□□ -1.56
VLDLR-204ENST00000478776 ATF4P18848 351 aaPredicted RBP5.3□□□□□ -1.56
VLDLR-204ENST00000478776 TTLL11Q8NHH1 800 aa5.3□□□□□ -1.56
VLDLR-204ENST00000478776 PIP4K2CQ8TBX8 421 aa5.3□□□□□ -1.56
VLDLR-204ENST00000478776 GNRHR2Q96P88 292 aa5.3□□□□□ -1.56
VLDLR-204ENST00000478776 LRRC37BQ96QE4 947 aa5.3□□□□□ -1.56
VLDLR-204ENST00000478776 MEGF9Q9H1U4 602 aa5.3□□□□□ -1.56
VLDLR-204ENST00000478776 WASF3Q9UPY6 502 aa5.3□□□□□ -1.56
VLDLR-204ENST00000478776 B2RBV5 119 aa5.29□□□□□ -1.56
VLDLR-204ENST00000478776 CKMP06732 381 aa5.29□□□□□ -1.56
VLDLR-204ENST00000478776 ENO2P09104 434 aaPredicted RBP5.29□□□□□ -1.56
VLDLR-204ENST00000478776 GLRBP48167 497 aa5.29□□□□□ -1.56
VLDLR-204ENST00000478776 TGFB2P61812 414 aa5.29□□□□□ -1.56
VLDLR-204ENST00000478776 R3HDM1Q15032 1099 aaKnown RBP5.29□□□□□ -1.56
VLDLR-204ENST00000478776 NAALADL2Q58DX5 795 aa5.29□□□□□ -1.56
VLDLR-204ENST00000478776 CRB2Q5IJ48 1285 aa5.29□□□□□ -1.56
VLDLR-204ENST00000478776 DENND5AQ6IQ26 1287 aa5.29□□□□□ -1.56
VLDLR-204ENST00000478776 EEPD1Q7L9B9 569 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms