RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 CNGA1P29973 690 aa15.52■□□□□ 0.07
NPHP4-208ENST00000478423 PPFIA1Q13136 1202 aa15.52■□□□□ 0.07
NPHP4-208ENST00000478423 RASA3Q14644 834 aa15.52■□□□□ 0.07
NPHP4-208ENST00000478423 CCDC14Q49A88 953 aa15.52■□□□□ 0.07
NPHP4-208ENST00000478423 SLC17A8Q8NDX2 589 aa15.52■□□□□ 0.07
NPHP4-208ENST00000478423 MAIP1Q8WWC4 291 aa15.52■□□□□ 0.07
NPHP4-208ENST00000478423 WRNIP1Q96S55 665 aa15.52■□□□□ 0.07
NPHP4-208ENST00000478423 SENP2Q9HC62 589 aa15.52■□□□□ 0.07
NPHP4-208ENST00000478423 SPTLC3Q9NUV7 552 aa15.52■□□□□ 0.07
NPHP4-208ENST00000478423 GCNT4Q9P109 453 aa15.52■□□□□ 0.07
NPHP4-208ENST00000478423 MAP2P11137 1827 aaKnown RBP15.52■□□□□ 0.07
NPHP4-208ENST00000478423 NDUFA10O95299 355 aa15.52■□□□□ 0.07
NPHP4-208ENST00000478423 TDP2O95551 362 aa15.52■□□□□ 0.07
NPHP4-208ENST00000478423 CEP128Q6ZU80 1094 aa15.52■□□□□ 0.07
NPHP4-208ENST00000478423 PROCA1Q8NCQ7 364 aaPredicted RBP15.52■□□□□ 0.07
NPHP4-208ENST00000478423 CERKQ8TCT0 537 aa15.52■□□□□ 0.07
NPHP4-208ENST00000478423 FAM205CA6NFA0 338 aa15.51■□□□□ 0.07
NPHP4-208ENST00000478423 E9PMD0 336 aa15.51■□□□□ 0.07
NPHP4-208ENST00000478423 PRR29P0C7W0 189 aa15.51■□□□□ 0.07
NPHP4-208ENST00000478423 ATP5DP30049 168 aa15.51■□□□□ 0.07
NPHP4-208ENST00000478423 CCND2P30279 289 aa15.51■□□□□ 0.07
NPHP4-208ENST00000478423 EIF4A3P38919 411 aaKnown RBP15.51■□□□□ 0.07
NPHP4-208ENST00000478423 PRCPP42785 496 aa15.51■□□□□ 0.07
NPHP4-208ENST00000478423 MXRA7P84157 204 aa15.51■□□□□ 0.07
NPHP4-208ENST00000478423 C6orf163Q5TEZ5 329 aa15.51■□□□□ 0.07
NPHP4-208ENST00000478423 INTS5Q6P9B9 1019 aaKnown RBP15.51■□□□□ 0.07
NPHP4-208ENST00000478423 SRGAP1Q7Z6B7 1085 aa15.51■□□□□ 0.07
NPHP4-208ENST00000478423 CLEC10AQ8IUN9 316 aa15.51■□□□□ 0.07
NPHP4-208ENST00000478423 PABPN1LA6NDY0 278 aaKnown RBP15.51■□□□□ 0.07
NPHP4-208ENST00000478423 MXI1P50539 228 aa15.51■□□□□ 0.07
NPHP4-208ENST00000478423 MFAP3P55082 362 aa15.51■□□□□ 0.07
NPHP4-208ENST00000478423 SBK1Q52WX2 424 aa15.51■□□□□ 0.07
NPHP4-208ENST00000478423 SSX2IPQ9Y2D8 614 aa15.51■□□□□ 0.07
NPHP4-208ENST00000478423 PIK3CAP42336 1068 aa15.51■□□□□ 0.07
NPHP4-208ENST00000478423 MESDQ14696 234 aa15.51■□□□□ 0.07
NPHP4-208ENST00000478423 MIS18BP1Q6P0N0 1132 aa15.51■□□□□ 0.07
NPHP4-208ENST00000478423 RABGGTAQ92696 567 aa15.51■□□□□ 0.07
NPHP4-208ENST00000478423 FLT1P17948 1338 aa15.51■□□□□ 0.07
NPHP4-208ENST00000478423 POTEB3A0JP26 581 aa15.51■□□□□ 0.07
NPHP4-208ENST00000478423 POTECB2RU33 542 aa15.51■□□□□ 0.07
NPHP4-208ENST00000478423 LMNB1P20700 586 aa15.51■□□□□ 0.07
NPHP4-208ENST00000478423 ATP2C1P98194 919 aaPredicted RBP15.51■□□□□ 0.07
NPHP4-208ENST00000478423 POTEBQ6S5H4 581 aa15.51■□□□□ 0.07
NPHP4-208ENST00000478423 JPH2Q9BR39 696 aaPredicted RBP15.51■□□□□ 0.07
NPHP4-208ENST00000478423 RAVER2Q9HCJ3 691 aaKnown RBP15.51■□□□□ 0.07
NPHP4-208ENST00000478423 MTMR4Q9NYA4 1195 aa15.51■□□□□ 0.07
NPHP4-208ENST00000478423 MYO1FO00160 1098 aa15.5■□□□□ 0.07
NPHP4-208ENST00000478423 GFPT2O94808 682 aa15.5■□□□□ 0.07
NPHP4-208ENST00000478423 MNAT1P51948 309 aa15.5■□□□□ 0.07
NPHP4-208ENST00000478423 BPIFB4P59827 614 aa15.5■□□□□ 0.07
NPHP4-208ENST00000478423 PPP2R5EQ16537 467 aa15.5■□□□□ 0.07
NPHP4-208ENST00000478423 MB21D1Q8N884 522 aa15.5■□□□□ 0.07
NPHP4-208ENST00000478423 FAM20AQ96MK3 541 aa15.5■□□□□ 0.07
NPHP4-208ENST00000478423 PANX2Q96RD6 677 aa15.5■□□□□ 0.07
NPHP4-208ENST00000478423 DPH5Q9H2P9 285 aa15.5■□□□□ 0.07
NPHP4-208ENST00000478423 ADAMTS1Q9UHI8 967 aa15.5■□□□□ 0.07
NPHP4-208ENST00000478423 IREB2P48200 963 aaKnown RBP15.5■□□□□ 0.07
NPHP4-208ENST00000478423 HESX1Q9UBX0 185 aa15.5■□□□□ 0.07
NPHP4-208ENST00000478423 ATF7P17544 494 aaPredicted RBP15.5■□□□□ 0.07
NPHP4-208ENST00000478423 TTBK2Q6IQ55 1244 aa15.5■□□□□ 0.07
NPHP4-208ENST00000478423 CNTNAP4Q9C0A0 1308 aa15.5■□□□□ 0.07
NPHP4-208ENST00000478423 MFAP3LO75121 409 aa15.49■□□□□ 0.07
NPHP4-208ENST00000478423 POLR2BP30876 1174 aaKnown RBP15.49■□□□□ 0.07
NPHP4-208ENST00000478423 TFDP1Q14186 410 aa15.49■□□□□ 0.07
NPHP4-208ENST00000478423 SCYL2Q6P3W7 929 aa15.49■□□□□ 0.07
NPHP4-208ENST00000478423 CCDC170Q8IYT3 715 aa15.49■□□□□ 0.07
NPHP4-208ENST00000478423 MICALL1Q8N3F8 863 aa15.49■□□□□ 0.07
NPHP4-208ENST00000478423 OSBPL5Q9H0X9 879 aaPredicted RBP15.49■□□□□ 0.07
NPHP4-208ENST00000478423 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.49■□□□□ 0.07
NPHP4-208ENST00000478423 COL3A1P02461 1466 aaPredicted RBP15.49■□□□□ 0.07
NPHP4-208ENST00000478423 MROH2AA6NES4 1674 aa15.49■□□□□ 0.07
NPHP4-208ENST00000478423 FDPSP14324 419 aaKnown RBP15.49■□□□□ 0.07
NPHP4-208ENST00000478423 PEX3P56589 373 aa15.49■□□□□ 0.07
NPHP4-208ENST00000478423 MTMR3Q13615 1198 aa15.49■□□□□ 0.07
NPHP4-208ENST00000478423 PPP1R18Q6NYC8 613 aa15.49■□□□□ 0.07
NPHP4-208ENST00000478423 ARMC9Q7Z3E5 817 aa15.49■□□□□ 0.07
NPHP4-208ENST00000478423 CCDC89Q8N998 374 aa15.49■□□□□ 0.07
NPHP4-208ENST00000478423 GIMAP7Q8NHV1 300 aa15.49■□□□□ 0.07
NPHP4-208ENST00000478423 SPZ1Q9BXG8 430 aa15.49■□□□□ 0.07
NPHP4-208ENST00000478423 NHEJ1Q9H9Q4 299 aaPredicted RBP15.49■□□□□ 0.07
NPHP4-208ENST00000478423 HERC5Q9UII4 1024 aaKnown RBP15.49■□□□□ 0.07
NPHP4-208ENST00000478423 OSBPP22059 807 aa15.49■□□□□ 0.07
NPHP4-208ENST00000478423 MTMR1Q13613 665 aa15.49■□□□□ 0.07
NPHP4-208ENST00000478423 CCDC6Q16204 474 aa15.49■□□□□ 0.07
NPHP4-208ENST00000478423 STRIP1Q5VSL9 837 aa15.49■□□□□ 0.07
NPHP4-208ENST00000478423 CROCCP2Q86T23 111 aa15.49■□□□□ 0.07
NPHP4-208ENST00000478423 AKT3Q9Y243 479 aa15.49■□□□□ 0.07
NPHP4-208ENST00000478423 PVALEFA0A1B0GWK0 134 aa15.49■□□□□ 0.07
NPHP4-208ENST00000478423 PPP4R3CPQ6ZMV5 832 aa15.49■□□□□ 0.07
NPHP4-208ENST00000478423 PRPF38AQ8NAV1 312 aaKnown RBP15.49■□□□□ 0.07
NPHP4-208ENST00000478423 SFR1Q86XK3 245 aa15.48■□□□□ 0.07
NPHP4-208ENST00000478423 STK10O94804 968 aaKnown RBP15.48■□□□□ 0.07
NPHP4-208ENST00000478423 PSAPP07602 524 aa15.48■□□□□ 0.07
NPHP4-208ENST00000478423 HOXA7P31268 230 aaPredicted RBP15.48■□□□□ 0.07
NPHP4-208ENST00000478423 CXCR5P32302 372 aa15.48■□□□□ 0.07
NPHP4-208ENST00000478423 CTNNA1P35221 906 aaKnown RBP15.48■□□□□ 0.07
NPHP4-208ENST00000478423 GUCY2DQ02846 1103 aa15.48■□□□□ 0.07
NPHP4-208ENST00000478423 FBXO2Q9UK22 296 aaPredicted RBP15.48■□□□□ 0.07
NPHP4-208ENST00000478423 PCDHB4Q9Y5E5 795 aa15.48■□□□□ 0.07
NPHP4-208ENST00000478423 PPLO60437 1756 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms