RNA–Protein interactions for RNA: ENST00000478082.5

PLOD3-212, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 1,585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-212ENST00000478082 SENP7Q9BQF6 1050 aa21.27■■□□□ 1
PLOD3-212ENST00000478082 AGO4Q9HCK5 861 aaKnown RBP21.27■■□□□ 1
PLOD3-212ENST00000478082 SCN10AQ9Y5Y9 1956 aa21.27■■□□□ 1
PLOD3-212ENST00000478082 CABYRO75952 493 aa21.27■□□□□ 0.99
PLOD3-212ENST00000478082 HOXD8P13378 290 aaPredicted RBP21.27■□□□□ 0.99
PLOD3-212ENST00000478082 DGKDQ16760 1214 aa21.27■□□□□ 0.99
PLOD3-212ENST00000478082 INF2Q27J81 1249 aa21.27■□□□□ 0.99
PLOD3-212ENST00000478082 BRDTQ58F21 947 aaPredicted RBP21.27■□□□□ 0.99
PLOD3-212ENST00000478082 MCTP2Q6DN12 878 aa21.27■□□□□ 0.99
PLOD3-212ENST00000478082 GALNT17Q6IS24 598 aa21.27■□□□□ 0.99
PLOD3-212ENST00000478082 PLA2G4DQ86XP0 818 aa21.27■□□□□ 0.99
PLOD3-212ENST00000478082 FAM177A1Q8N128 213 aaPredicted RBP21.27■□□□□ 0.99
PLOD3-212ENST00000478082 TNFRSF25Q93038 417 aa21.27■□□□□ 0.99
PLOD3-212ENST00000478082 LENG9Q96B70 501 aa21.27■□□□□ 0.99
PLOD3-212ENST00000478082 CDHR1Q96JP9 859 aa21.27■□□□□ 0.99
PLOD3-212ENST00000478082 PDLIM7Q9NR12 457 aa21.27■□□□□ 0.99
PLOD3-212ENST00000478082 TDP2O95551 362 aa21.26■□□□□ 0.99
PLOD3-212ENST00000478082 MMP1P03956 469 aa21.26■□□□□ 0.99
PLOD3-212ENST00000478082 FAAP100Q0VG06 881 aa21.26■□□□□ 0.99
PLOD3-212ENST00000478082 NBPF20Q3BBV1 942 aa21.26■□□□□ 0.99
PLOD3-212ENST00000478082 PRR16Q569H4 304 aa21.26■□□□□ 0.99
PLOD3-212ENST00000478082 PIK3AP1Q6ZUJ8 805 aa21.26■□□□□ 0.99
PLOD3-212ENST00000478082 FAM126BQ8IXS8 530 aa21.26■□□□□ 0.99
PLOD3-212ENST00000478082 GJA10Q969M2 543 aa21.26■□□□□ 0.99
PLOD3-212ENST00000478082 PRDM5Q9NQX1 630 aaPredicted RBP21.26■□□□□ 0.99
PLOD3-212ENST00000478082 NR2E3Q9Y5X4 410 aa21.26■□□□□ 0.99
PLOD3-212ENST00000478082 TRIM43BA6NCK2 446 aa21.25■□□□□ 0.99
PLOD3-212ENST00000478082 BTBD18B2RXH4 712 aa21.25■□□□□ 0.99
PLOD3-212ENST00000478082 ITGB8P26012 769 aa21.25■□□□□ 0.99
PLOD3-212ENST00000478082 CIITAP33076 1130 aa21.25■□□□□ 0.99
PLOD3-212ENST00000478082 KRT2P35908 639 aa21.25■□□□□ 0.99
PLOD3-212ENST00000478082 ANKRD33Q7Z3H0 272 aa21.25■□□□□ 0.99
PLOD3-212ENST00000478082 TRIM50Q86XT4 487 aa21.25■□□□□ 0.99
PLOD3-212ENST00000478082 TRIM43Q96BQ3 446 aaPredicted RBP21.25■□□□□ 0.99
PLOD3-212ENST00000478082 C16orf70Q9BSU1 422 aa21.25■□□□□ 0.99
PLOD3-212ENST00000478082 RBAK-RBAKDNI3L0D1 243 aa21.24■□□□□ 0.99
PLOD3-212ENST00000478082 DDX39AO00148 427 aaKnown RBP21.24■□□□□ 0.99
PLOD3-212ENST00000478082 NOP56O00567 594 aaKnown RBP21.24■□□□□ 0.99
PLOD3-212ENST00000478082 NONOQ15233 471 aaKnown RBP eCLIP21.24■□□□□ 0.99
PLOD3-212ENST00000478082 NIPA1Q7RTP0 329 aa21.24■□□□□ 0.99
PLOD3-212ENST00000478082 KRT25Q7Z3Z0 450 aa21.24■□□□□ 0.99
PLOD3-212ENST00000478082 DIS3L2Q8IYB7 885 aaKnown RBP21.24■□□□□ 0.99
PLOD3-212ENST00000478082 TRPV6Q9H1D0 765 aa21.24■□□□□ 0.99
PLOD3-212ENST00000478082 GSTTP1A0A1W2PQM5 241 aa21.23■□□□□ 0.99
PLOD3-212ENST00000478082 MAFGO15525 162 aa21.23■□□□□ 0.99
PLOD3-212ENST00000478082 B4GALT4O60513 344 aa21.23■□□□□ 0.99
PLOD3-212ENST00000478082 KPNA6O60684 536 aa21.23■□□□□ 0.99
PLOD3-212ENST00000478082 F2P00734 622 aa21.23■□□□□ 0.99
PLOD3-212ENST00000478082 LGALS2P05162 132 aa21.23■□□□□ 0.99
PLOD3-212ENST00000478082 MCM2P49736 904 aa21.23■□□□□ 0.99
PLOD3-212ENST00000478082 HMGN5P82970 282 aaKnown RBP21.23■□□□□ 0.99
PLOD3-212ENST00000478082 UTP14CQ5TAP6 766 aaKnown RBP21.23■□□□□ 0.99
PLOD3-212ENST00000478082 PRPF38BQ5VTL8 546 aaKnown RBP21.23■□□□□ 0.99
PLOD3-212ENST00000478082 C8orf76Q96K31 380 aa21.23■□□□□ 0.99
PLOD3-212ENST00000478082 TRMT13Q9NUP7 481 aaKnown RBP21.23■□□□□ 0.99
PLOD3-212ENST00000478082 CCDC194A0A1B0GVG4 234 aa21.23■□□□□ 0.99
PLOD3-212ENST00000478082 WNT7AO00755 349 aa21.23■□□□□ 0.99
PLOD3-212ENST00000478082 DHX15O43143 795 aaKnown RBP21.23■□□□□ 0.99
PLOD3-212ENST00000478082 PPFIA4O75335 1185 aa21.23■□□□□ 0.99
PLOD3-212ENST00000478082 CD4P01730 458 aa21.23■□□□□ 0.99
PLOD3-212ENST00000478082 CLTBP09497 229 aa21.23■□□□□ 0.99
PLOD3-212ENST00000478082 PSEN2P49810 448 aa21.23■□□□□ 0.99
PLOD3-212ENST00000478082 USP11P51784 963 aa21.23■□□□□ 0.99
PLOD3-212ENST00000478082 FAM47CQ5HY64 1035 aa21.23■□□□□ 0.99
PLOD3-212ENST00000478082 FAM184AQ8NB25 1140 aa21.23■□□□□ 0.99
PLOD3-212ENST00000478082 JPH1Q9HDC5 661 aaPredicted RBP21.23■□□□□ 0.99
PLOD3-212ENST00000478082 CEP290O15078 2479 aa21.22■□□□□ 0.99
PLOD3-212ENST00000478082 RANBP2P49792 3224 aaKnown RBP21.22■□□□□ 0.99
PLOD3-212ENST00000478082 HAS3O00219 553 aa21.22■□□□□ 0.99
PLOD3-212ENST00000478082 CCNE2O96020 404 aa21.22■□□□□ 0.99
PLOD3-212ENST00000478082 TCF7P36402 384 aaPredicted RBP21.22■□□□□ 0.99
PLOD3-212ENST00000478082 TRIM29Q14134 588 aa21.22■□□□□ 0.99
PLOD3-212ENST00000478082 HIC1Q14526 733 aa21.22■□□□□ 0.99
PLOD3-212ENST00000478082 MFSD10Q14728 455 aa21.22■□□□□ 0.99
PLOD3-212ENST00000478082 KIAA0753Q2KHM9 967 aa21.22■□□□□ 0.99
PLOD3-212ENST00000478082 LETM2Q2VYF4 491 aa21.22■□□□□ 0.99
PLOD3-212ENST00000478082 GIMAP8Q8ND71 665 aaPredicted RBP21.22■□□□□ 0.99
PLOD3-212ENST00000478082 TOX2Q96NM4 488 aa21.22■□□□□ 0.99
PLOD3-212ENST00000478082 ZNF577Q9BSK1 485 aa21.22■□□□□ 0.99
PLOD3-212ENST00000478082 SLC9A2Q9UBY0 812 aa21.22■□□□□ 0.99
PLOD3-212ENST00000478082 NFASCO94856 1347 aa21.21■□□□□ 0.99
PLOD3-212ENST00000478082 DCDC2CA8MYV0 355 aa21.21■□□□□ 0.99
PLOD3-212ENST00000478082 IPO5O00410 1097 aaKnown RBP21.21■□□□□ 0.99
PLOD3-212ENST00000478082 MSH4O15457 936 aa21.21■□□□□ 0.99
PLOD3-212ENST00000478082 SLC37A4O43826 429 aa21.21■□□□□ 0.99
PLOD3-212ENST00000478082 MDM2Q00987 491 aaPredicted RBP21.21■□□□□ 0.99
PLOD3-212ENST00000478082 IL27Q8NEV9 243 aa21.21■□□□□ 0.99
PLOD3-212ENST00000478082 PCYT2Q99447 389 aa21.21■□□□□ 0.99
PLOD3-212ENST00000478082 LTBP2Q14767 1821 aa21.2■□□□□ 0.98
PLOD3-212ENST00000478082 GJB2P29033 226 aa21.2■□□□□ 0.98
PLOD3-212ENST00000478082 SETQ01105 290 aaPredicted RBP21.2■□□□□ 0.98
PLOD3-212ENST00000478082 FBXO18Q8NFZ0 1043 aa21.2■□□□□ 0.98
PLOD3-212ENST00000478082 SDF4Q9BRK5 362 aa21.2■□□□□ 0.98
PLOD3-212ENST00000478082 TMEM39AQ9NV64 488 aa21.2■□□□□ 0.98
PLOD3-212ENST00000478082 HDAC6Q9UBN7 1215 aa21.2■□□□□ 0.98
PLOD3-212ENST00000478082 TBX21Q9UL17 535 aa21.2■□□□□ 0.98
PLOD3-212ENST00000478082 MROH7Q68CQ1 1323 aa21.2■□□□□ 0.98
PLOD3-212ENST00000478082 CYP3A7-CYP3A51PA0A087WV96 503 aa21.19■□□□□ 0.98
PLOD3-212ENST00000478082 KIF28PB7ZC32 967 aa21.19■□□□□ 0.98
PLOD3-212ENST00000478082 CYP3A7P24462 503 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms