RNA–Protein interactions for RNA: ENST00000478015.5

LCLAT1-209, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-209ENST00000478015 METAP2P50579 478 aaKnown RBP eCLIP11.75□□□□□ -0.53
LCLAT1-209ENST00000478015 SMAD3P84022 425 aaKnown RBP11.75□□□□□ -0.53
LCLAT1-209ENST00000478015 PPIGQ13427 754 aaKnown RBP eCLIP11.75□□□□□ -0.53
LCLAT1-209ENST00000478015 MFSD10Q14728 455 aa11.75□□□□□ -0.53
LCLAT1-209ENST00000478015 TRIM71Q2Q1W2 868 aaKnown RBP11.75□□□□□ -0.53
LCLAT1-209ENST00000478015 RUFY3Q7L099 469 aa11.75□□□□□ -0.53
LCLAT1-209ENST00000478015 SESTD1Q86VW0 696 aa11.75□□□□□ -0.53
LCLAT1-209ENST00000478015 PBX4Q9BYU1 374 aa11.75□□□□□ -0.53
LCLAT1-209ENST00000478015 RBM28Q9NW13 759 aaKnown RBP11.75□□□□□ -0.53
LCLAT1-209ENST00000478015 BARHL2Q9NY43 387 aa11.75□□□□□ -0.53
LCLAT1-209ENST00000478015 UBIAD1Q9Y5Z9 338 aa11.75□□□□□ -0.53
LCLAT1-209ENST00000478015 NID2Q14112 1375 aa11.75□□□□□ -0.53
LCLAT1-209ENST00000478015 LGALS2P05162 132 aa11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 RABGGTBP53611 331 aa11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 NAPAP54920 295 aa11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 TRAF1Q13077 416 aa11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 BRDTQ58F21 947 aaPredicted RBP11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 SYNE3Q6ZMZ3 975 aa11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 TMCO2Q7Z6W1 182 aaPredicted RBP11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 CRYGNQ8WXF5 182 aa11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 HERVK_113Q902F9 699 aa11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 ZBTB10Q96DT7 871 aa11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 RNPEPQ9H4A4 650 aa11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 MLXIPQ9HAP2 919 aa11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 RIC8AQ9NPQ8 531 aa11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 GSTTP1A0A1W2PQM5 241 aa11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 SMCO2A6NFE2 343 aa11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 H3BRB1 525 aa11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 FIBPO43427 364 aa11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 NBNO60934 754 aa11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 ARHGEF15O94989 841 aa11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 ARP10275 920 aa11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 DNAJB2P25686 324 aa11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 HOXC8P31273 242 aa11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 GRIN2CQ14957 1233 aa11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 PFKFB3Q16875 520 aaPredicted RBP11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 METTL7BQ6UX53 244 aa11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 SPRED2Q7Z698 418 aa11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 RASGRP4Q8TDF6 673 aa11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 CUL5Q93034 780 aa11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 CDX2Q99626 313 aaPredicted RBP11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 TUT1Q9H6E5 874 aaKnown RBP11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 YBX2Q9Y2T7 364 aaKnown RBP11.74□□□□□ -0.53
LCLAT1-209ENST00000478015 KAT6AQ92794 2004 aa11.73□□□□□ -0.53
LCLAT1-209ENST00000478015 FAM86B1E9PN63 330 aa11.73□□□□□ -0.53
LCLAT1-209ENST00000478015 TREHO43280 583 aa11.73□□□□□ -0.53
LCLAT1-209ENST00000478015 FGBP02675 491 aa11.73□□□□□ -0.53
LCLAT1-209ENST00000478015 FAM86B2P0C5J1 330 aa11.73□□□□□ -0.53
LCLAT1-209ENST00000478015 SUPT20HL2P0C7V6 817 aa11.73□□□□□ -0.53
LCLAT1-209ENST00000478015 RCAN1P53805 252 aa11.73□□□□□ -0.53
LCLAT1-209ENST00000478015 FGD1P98174 961 aa11.73□□□□□ -0.53
LCLAT1-209ENST00000478015 ITGB3BPQ13352 177 aaPredicted RBP11.73□□□□□ -0.53
LCLAT1-209ENST00000478015 KCNV1Q6PIU1 500 aa11.73□□□□□ -0.53
LCLAT1-209ENST00000478015 AIFM3Q96NN9 605 aa11.73□□□□□ -0.53
LCLAT1-209ENST00000478015 PCYT2Q99447 389 aa11.73□□□□□ -0.53
LCLAT1-209ENST00000478015 SEZ6LQ9BYH1 1024 aa11.73□□□□□ -0.53
LCLAT1-209ENST00000478015 KCNH7Q9NS40 1196 aa11.73□□□□□ -0.53
LCLAT1-209ENST00000478015 C5orf42Q9H799 3197 aa11.73□□□□□ -0.53
LCLAT1-209ENST00000478015 PRRC2BQ5JSZ5 2229 aaKnown RBP11.73□□□□□ -0.53
LCLAT1-209ENST00000478015 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 PITPNM1O00562 1244 aa11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 CKBP12277 381 aa11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 SCG2P13521 617 aa11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 ADAM17P78536 824 aa11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 PTPN11Q06124 597 aaPredicted RBP11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 ZNF618Q5T7W0 954 aa11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 JAKMIP3Q5VZ66 844 aa11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 C7orf31Q8N865 590 aa11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 SENP7Q9BQF6 1050 aa11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 ANO3Q9BYT9 981 aa11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 SETD4Q9NVD3 440 aa11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 SPDYE3A6NKU9 549 aa11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 STAM2O75886 525 aa11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 SMIM10L2AP0DMW4 78 aa11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 SMIM10L2BP0DMW5 78 aa11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 MTMR1Q13613 665 aa11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 GNPTABQ3T906 1256 aa11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 UTP14CQ5TAP6 766 aaKnown RBP11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 PSRC1Q6PGN9 363 aaPredicted RBP11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 MYLIPQ8WY64 445 aa11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 GPRASP2Q96D09 838 aa11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 ZMYND12Q9H0C1 365 aa11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 JADE2Q9NQC1 790 aa11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 GJB4Q9NTQ9 266 aa11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 VPS54Q9P1Q0 977 aa11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 SIP14410 1827 aa11.72□□□□□ -0.53
LCLAT1-209ENST00000478015 IGLV3-22A0A075B6J6 115 aa11.71□□□□□ -0.53
LCLAT1-209ENST00000478015 PRPF3O43395 683 aaKnown RBP11.71□□□□□ -0.53
LCLAT1-209ENST00000478015 TCF7P36402 384 aaPredicted RBP11.71□□□□□ -0.53
LCLAT1-209ENST00000478015 ADCY7P51828 1080 aa11.71□□□□□ -0.53
LCLAT1-209ENST00000478015 STK3Q13188 491 aa11.71□□□□□ -0.53
LCLAT1-209ENST00000478015 NEDD9Q14511 834 aa11.71□□□□□ -0.53
LCLAT1-209ENST00000478015 NPY5RQ15761 445 aa11.71□□□□□ -0.53
LCLAT1-209ENST00000478015 ZNF697Q5TEC3 545 aa11.71□□□□□ -0.53
LCLAT1-209ENST00000478015 XRRA1Q6P2D8 792 aa11.71□□□□□ -0.53
LCLAT1-209ENST00000478015 SERINC5Q86VE9 423 aa11.71□□□□□ -0.53
LCLAT1-209ENST00000478015 MXRA8Q9BRK3 442 aa11.71□□□□□ -0.53
LCLAT1-209ENST00000478015 NOD1Q9Y239 953 aa11.71□□□□□ -0.53
LCLAT1-209ENST00000478015 STXBP5LQ9Y2K9 1186 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms