RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 DEFB128Q7Z7B8 93 aa15.82■□□□□ 0.12
HDAC7-222ENST00000477937 CAGE1Q8TC20 777 aa15.82■□□□□ 0.12
HDAC7-222ENST00000477937 TUT1Q9H6E5 874 aaKnown RBP15.82■□□□□ 0.12
HDAC7-222ENST00000477937 BARHL2Q9NY43 387 aa15.82■□□□□ 0.12
HDAC7-222ENST00000477937 MAFGO15525 162 aa15.81■□□□□ 0.12
HDAC7-222ENST00000477937 LGALS2P05162 132 aa15.81■□□□□ 0.12
HDAC7-222ENST00000477937 DNAJB2P25686 324 aa15.81■□□□□ 0.12
HDAC7-222ENST00000477937 TYW1BQ6NUM6 668 aa15.81■□□□□ 0.12
HDAC7-222ENST00000477937 AFAP1L1Q8TED9 768 aa15.81■□□□□ 0.12
HDAC7-222ENST00000477937 GUCD1Q96NT3 240 aa15.81■□□□□ 0.12
HDAC7-222ENST00000477937 CTAGE1Q96RT6 745 aa15.81■□□□□ 0.12
HDAC7-222ENST00000477937 ZSWIM6Q9HCJ5 1215 aa15.81■□□□□ 0.12
HDAC7-222ENST00000477937 CXXC1Q9P0U4 656 aaPredicted RBP15.81■□□□□ 0.12
HDAC7-222ENST00000477937 UBIAD1Q9Y5Z9 338 aa15.81■□□□□ 0.12
HDAC7-222ENST00000477937 CYP46A1Q9Y6A2 500 aa15.81■□□□□ 0.12
HDAC7-222ENST00000477937 TET1Q8NFU7 2136 aa15.8■□□□□ 0.12
HDAC7-222ENST00000477937 NID2Q14112 1375 aa15.8■□□□□ 0.12
HDAC7-222ENST00000477937 ACTN1P12814 892 aa15.8■□□□□ 0.12
HDAC7-222ENST00000477937 SCG2P13521 617 aa15.8■□□□□ 0.12
HDAC7-222ENST00000477937 ITGB5P18084 799 aa15.8■□□□□ 0.12
HDAC7-222ENST00000477937 AKAP17AQ02040 695 aaKnown RBP15.8■□□□□ 0.12
HDAC7-222ENST00000477937 PTK7Q13308 1070 aa15.8■□□□□ 0.12
HDAC7-222ENST00000477937 MTMR1Q13613 665 aa15.8■□□□□ 0.12
HDAC7-222ENST00000477937 PFKFB3Q16875 520 aaPredicted RBP15.8■□□□□ 0.12
HDAC7-222ENST00000477937 VWCEQ96DN2 955 aa15.8■□□□□ 0.12
HDAC7-222ENST00000477937 GPR20Q99678 358 aa15.8■□□□□ 0.12
HDAC7-222ENST00000477937 TM6SF1Q9BZW5 370 aa15.8■□□□□ 0.12
HDAC7-222ENST00000477937 TTYH1Q9H313 450 aaPredicted RBP15.8■□□□□ 0.12
HDAC7-222ENST00000477937 JADE2Q9NQC1 790 aa15.8■□□□□ 0.12
HDAC7-222ENST00000477937 SLC4A7Q9Y6M7 1214 aa15.8■□□□□ 0.12
HDAC7-222ENST00000477937 ZBBXA8MT70 800 aa15.79■□□□□ 0.12
HDAC7-222ENST00000477937 GRXCR1A8MXD5 290 aa15.79■□□□□ 0.12
HDAC7-222ENST00000477937 PRPF3O43395 683 aaKnown RBP15.79■□□□□ 0.12
HDAC7-222ENST00000477937 ATP9AO75110 1047 aa15.79■□□□□ 0.12
HDAC7-222ENST00000477937 PARNO95453 639 aaKnown RBP15.79■□□□□ 0.12
HDAC7-222ENST00000477937 SELPP16109 830 aa15.79■□□□□ 0.12
HDAC7-222ENST00000477937 EVCP57679 992 aa15.79■□□□□ 0.12
HDAC7-222ENST00000477937 SP4Q02446 784 aa15.79■□□□□ 0.12
HDAC7-222ENST00000477937 RBL2Q08999 1139 aa15.79■□□□□ 0.12
HDAC7-222ENST00000477937 CCDC12Q8WUD4 166 aaPredicted RBP15.79■□□□□ 0.12
HDAC7-222ENST00000477937 TIFAQ96CG3 184 aa15.79■□□□□ 0.12
HDAC7-222ENST00000477937 FTOQ9C0B1 505 aaKnown RBP eCLIP15.79■□□□□ 0.12
HDAC7-222ENST00000477937 MSRAQ9UJ68 235 aa15.79■□□□□ 0.12
HDAC7-222ENST00000477937 ZNF215Q9UL58 517 aaPredicted RBP15.79■□□□□ 0.12
HDAC7-222ENST00000477937 C17orf102A2RUQ5 167 aa15.78■□□□□ 0.12
HDAC7-222ENST00000477937 CKBP12277 381 aa15.78■□□□□ 0.12
HDAC7-222ENST00000477937 KCNA2P16389 499 aa15.78■□□□□ 0.12
HDAC7-222ENST00000477937 PDIA3P30101 505 aaKnown RBP15.78■□□□□ 0.12
HDAC7-222ENST00000477937 CLK2P49760 499 aaKnown RBP15.78■□□□□ 0.12
HDAC7-222ENST00000477937 CCT2P78371 535 aaKnown RBP15.78■□□□□ 0.12
HDAC7-222ENST00000477937 ZNF200P98182 395 aaPredicted RBP15.78■□□□□ 0.12
HDAC7-222ENST00000477937 AP3B2Q13367 1082 aa15.78■□□□□ 0.12
HDAC7-222ENST00000477937 TOB2Q14106 344 aaPredicted RBP15.78■□□□□ 0.12
HDAC7-222ENST00000477937 UTP14CQ5TAP6 766 aaKnown RBP15.78■□□□□ 0.12
HDAC7-222ENST00000477937 DHX38Q92620 1227 aaKnown RBP15.78■□□□□ 0.12
HDAC7-222ENST00000477937 CDX2Q99626 313 aaPredicted RBP15.78■□□□□ 0.12
HDAC7-222ENST00000477937 MXRA8Q9BRK3 442 aa15.78■□□□□ 0.12
HDAC7-222ENST00000477937 ANO3Q9BYT9 981 aa15.78■□□□□ 0.12
HDAC7-222ENST00000477937 PBX4Q9BYU1 374 aa15.78■□□□□ 0.12
HDAC7-222ENST00000477937 RNPEPQ9H4A4 650 aa15.78■□□□□ 0.12
HDAC7-222ENST00000477937 ESYT2A0FGR8 921 aa15.77■□□□□ 0.12
HDAC7-222ENST00000477937 SMIM10L2AP0DMW4 78 aa15.77■□□□□ 0.12
HDAC7-222ENST00000477937 SMIM10L2BP0DMW5 78 aa15.77■□□□□ 0.12
HDAC7-222ENST00000477937 GNAT1P11488 350 aa15.77■□□□□ 0.12
HDAC7-222ENST00000477937 IFNAR1P17181 557 aa15.77■□□□□ 0.12
HDAC7-222ENST00000477937 PBX2P40425 430 aa15.77■□□□□ 0.12
HDAC7-222ENST00000477937 HIC1Q14526 733 aa15.77■□□□□ 0.12
HDAC7-222ENST00000477937 RAB30Q15771 203 aa15.77■□□□□ 0.12
HDAC7-222ENST00000477937 MCTP2Q6DN12 878 aa15.77■□□□□ 0.12
HDAC7-222ENST00000477937 LRRC8DQ7L1W4 858 aa15.77■□□□□ 0.12
HDAC7-222ENST00000477937 SEPT1Q8WYJ6 367 aa15.77■□□□□ 0.12
HDAC7-222ENST00000477937 ATP6V0A1Q93050 837 aa15.77■□□□□ 0.12
HDAC7-222ENST00000477937 PHKBQ93100 1093 aa15.77■□□□□ 0.12
HDAC7-222ENST00000477937 PGBD1Q96JS3 809 aa15.77■□□□□ 0.12
HDAC7-222ENST00000477937 RNF26Q9BY78 433 aaPredicted RBP15.77■□□□□ 0.12
HDAC7-222ENST00000477937 ZMYND12Q9H0C1 365 aa15.77■□□□□ 0.12
HDAC7-222ENST00000477937 ZNF576Q9H609 170 aa15.77■□□□□ 0.12
HDAC7-222ENST00000477937 C6orf50Q9HD87 102 aa15.77■□□□□ 0.12
HDAC7-222ENST00000477937 TMEM260Q9NX78 707 aa15.77■□□□□ 0.12
HDAC7-222ENST00000477937 PKD2L1Q9P0L9 805 aa15.77■□□□□ 0.12
HDAC7-222ENST00000477937 MYO9BQ13459 2157 aa15.77■□□□□ 0.11
HDAC7-222ENST00000477937 ATP2A2P16615 1042 aaKnown RBP15.76■□□□□ 0.11
HDAC7-222ENST00000477937 GNA11P29992 359 aa15.76■□□□□ 0.11
HDAC7-222ENST00000477937 TCF7P36402 384 aaPredicted RBP15.76■□□□□ 0.11
HDAC7-222ENST00000477937 ZNF76P36508 570 aa15.76■□□□□ 0.11
HDAC7-222ENST00000477937 SREBF1P36956 1147 aa15.76■□□□□ 0.11
HDAC7-222ENST00000477937 NTRK3Q16288 839 aa15.76■□□□□ 0.11
HDAC7-222ENST00000477937 PKN1Q16512 942 aa15.76■□□□□ 0.11
HDAC7-222ENST00000477937 CEP55Q53EZ4 464 aa15.76■□□□□ 0.11
HDAC7-222ENST00000477937 SERINC5Q86VE9 423 aa15.76■□□□□ 0.11
HDAC7-222ENST00000477937 TRIM50Q86XT4 487 aa15.76■□□□□ 0.11
HDAC7-222ENST00000477937 ZNF274Q96GC6 653 aaPredicted RBP15.76■□□□□ 0.11
HDAC7-222ENST00000477937 SLC26A6Q9BXS9 759 aa15.76■□□□□ 0.11
HDAC7-222ENST00000477937 UPF3BQ9BZI7 483 aaKnown RBP15.76■□□□□ 0.11
HDAC7-222ENST00000477937 KCNH7Q9NS40 1196 aa15.76■□□□□ 0.11
HDAC7-222ENST00000477937 TELO2Q9Y4R8 837 aa15.76■□□□□ 0.11
HDAC7-222ENST00000477937 GSTTP1A0A1W2PQM5 241 aa15.75■□□□□ 0.11
HDAC7-222ENST00000477937 HOXC8P31273 242 aa15.75■□□□□ 0.11
HDAC7-222ENST00000477937 ARHGAP4P98171 946 aa15.75■□□□□ 0.11
HDAC7-222ENST00000477937 TRIM71Q2Q1W2 868 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms