RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 SMIM10L2BP0DMW5 78 aa13.59□□□□□ -0.23
CPSF7-211ENST00000477890 CHMLP26374 656 aa13.59□□□□□ -0.23
CPSF7-211ENST00000477890 ERVK-21P61565 698 aa13.59□□□□□ -0.23
CPSF7-211ENST00000477890 TROAPQ12815 778 aa13.59□□□□□ -0.23
CPSF7-211ENST00000477890 GNPTABQ3T906 1256 aa13.59□□□□□ -0.23
CPSF7-211ENST00000477890 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.59□□□□□ -0.23
CPSF7-211ENST00000477890 CATIPQ7Z7H3 387 aa13.59□□□□□ -0.23
CPSF7-211ENST00000477890 MYOCDQ8IZQ8 938 aa13.59□□□□□ -0.23
CPSF7-211ENST00000477890 DBF4BQ8NFT6 615 aa13.59□□□□□ -0.23
CPSF7-211ENST00000477890 RTEL1Q9NZ71 1219 aa13.59□□□□□ -0.23
CPSF7-211ENST00000477890 LMCD1Q9NZU5 365 aa13.59□□□□□ -0.23
CPSF7-211ENST00000477890 TAF6LQ9Y6J9 622 aa13.59□□□□□ -0.23
CPSF7-211ENST00000477890 BDP1A6H8Y1 2624 aa13.58□□□□□ -0.24
CPSF7-211ENST00000477890 AMHP03971 560 aa13.58□□□□□ -0.24
CPSF7-211ENST00000477890 MRPS9P82933 396 aaKnown RBP13.58□□□□□ -0.24
CPSF7-211ENST00000477890 CYFIP1Q7L576 1253 aa13.58□□□□□ -0.24
CPSF7-211ENST00000477890 RNPEPQ9H4A4 650 aa13.58□□□□□ -0.24
CPSF7-211ENST00000477890 INSL6Q9Y581 213 aa13.58□□□□□ -0.24
CPSF7-211ENST00000477890 FRMPD4Q14CM0 1322 aa13.58□□□□□ -0.24
CPSF7-211ENST00000477890 XIRP2A4UGR9 3374 aa13.57□□□□□ -0.24
CPSF7-211ENST00000477890 TREHO43280 583 aa13.57□□□□□ -0.24
CPSF7-211ENST00000477890 STAM2O75886 525 aa13.57□□□□□ -0.24
CPSF7-211ENST00000477890 CTSHP09668 335 aa13.57□□□□□ -0.24
CPSF7-211ENST00000477890 HOXC8P31273 242 aa13.57□□□□□ -0.24
CPSF7-211ENST00000477890 ICAM3P32942 547 aa13.57□□□□□ -0.24
CPSF7-211ENST00000477890 ANTXR2P58335 489 aa13.57□□□□□ -0.24
CPSF7-211ENST00000477890 NEDD9Q14511 834 aa13.57□□□□□ -0.24
CPSF7-211ENST00000477890 PLEKHG4Q58EX7 1191 aa13.57□□□□□ -0.24
CPSF7-211ENST00000477890 METTL7BQ6UX53 244 aa13.57□□□□□ -0.24
CPSF7-211ENST00000477890 INPP4AQ96PE3 977 aaPredicted RBP13.57□□□□□ -0.24
CPSF7-211ENST00000477890 C1QTNF1Q9BXJ1 281 aa13.57□□□□□ -0.24
CPSF7-211ENST00000477890 USP26Q9BXU7 913 aa13.57□□□□□ -0.24
CPSF7-211ENST00000477890 BRWD1Q9NSI6 2320 aa13.57□□□□□ -0.24
CPSF7-211ENST00000477890 KAT6AQ92794 2004 aa13.56□□□□□ -0.24
CPSF7-211ENST00000477890 SPATA31C2B4DYI2 1134 aa13.56□□□□□ -0.24
CPSF7-211ENST00000477890 SGSM2O43147 1006 aa13.56□□□□□ -0.24
CPSF7-211ENST00000477890 FIBPO43427 364 aa13.56□□□□□ -0.24
CPSF7-211ENST00000477890 SEMA3FQ13275 785 aa13.56□□□□□ -0.24
CPSF7-211ENST00000477890 MKRN4PQ13434 485 aaPredicted RBP13.56□□□□□ -0.24
CPSF7-211ENST00000477890 TRIM50Q86XT4 487 aa13.56□□□□□ -0.24
CPSF7-211ENST00000477890 MB21D2Q8IYB1 491 aaPredicted RBP13.56□□□□□ -0.24
CPSF7-211ENST00000477890 FBXO22Q8NEZ5 403 aa13.56□□□□□ -0.24
CPSF7-211ENST00000477890 CTCFLQ8NI51 663 aaPredicted RBP13.56□□□□□ -0.24
CPSF7-211ENST00000477890 SMARCC2Q8TAQ2 1214 aa13.56□□□□□ -0.24
CPSF7-211ENST00000477890 IGDCC4Q8TDY8 1250 aa13.56□□□□□ -0.24
CPSF7-211ENST00000477890 SEPT8Q92599 483 aa13.56□□□□□ -0.24
CPSF7-211ENST00000477890 CUL5Q93034 780 aa13.56□□□□□ -0.24
CPSF7-211ENST00000477890 GPR20Q99678 358 aa13.56□□□□□ -0.24
CPSF7-211ENST00000477890 C17orf80Q9BSJ5 609 aa13.56□□□□□ -0.24
CPSF7-211ENST00000477890 MYL10Q9BUA6 226 aa13.56□□□□□ -0.24
CPSF7-211ENST00000477890 SETD4Q9NVD3 440 aa13.56□□□□□ -0.24
CPSF7-211ENST00000477890 CAND2O75155 1236 aa13.55□□□□□ -0.24
CPSF7-211ENST00000477890 GNAT1P11488 350 aa13.55□□□□□ -0.24
CPSF7-211ENST00000477890 HTRA4P83105 476 aaPredicted RBP13.55□□□□□ -0.24
CPSF7-211ENST00000477890 SP4Q02446 784 aa13.55□□□□□ -0.24
CPSF7-211ENST00000477890 UTP14CQ5TAP6 766 aaKnown RBP13.55□□□□□ -0.24
CPSF7-211ENST00000477890 USP17L6PQ6QN14 398 aa13.55□□□□□ -0.24
CPSF7-211ENST00000477890 ZNF654Q8IZM8 581 aa13.55□□□□□ -0.24
CPSF7-211ENST00000477890 RRP36Q96EU6 259 aaKnown RBP13.55□□□□□ -0.24
CPSF7-211ENST00000477890 SPZ1Q9BXG8 430 aa13.55□□□□□ -0.24
CPSF7-211ENST00000477890 SEC63Q9UGP8 760 aaKnown RBP13.55□□□□□ -0.24
CPSF7-211ENST00000477890 ZNF215Q9UL58 517 aaPredicted RBP13.55□□□□□ -0.24
CPSF7-211ENST00000477890 TELO2Q9Y4R8 837 aa13.55□□□□□ -0.24
CPSF7-211ENST00000477890 MEIS2O14770 477 aa13.54□□□□□ -0.24
CPSF7-211ENST00000477890 DDAH1O94760 285 aa13.54□□□□□ -0.24
CPSF7-211ENST00000477890 UPP2O95045 317 aa13.54□□□□□ -0.24
CPSF7-211ENST00000477890 KIF5BP33176 963 aa13.54□□□□□ -0.24
CPSF7-211ENST00000477890 ARHGAP4P98171 946 aa13.54□□□□□ -0.24
CPSF7-211ENST00000477890 PCNX4Q63HM2 1172 aa13.54□□□□□ -0.24
CPSF7-211ENST00000477890 CASC1Q6TDU7 716 aa13.54□□□□□ -0.24
CPSF7-211ENST00000477890 NLRX1Q86UT6 975 aa13.54□□□□□ -0.24
CPSF7-211ENST00000477890 SP7Q8TDD2 431 aaPredicted RBP13.54□□□□□ -0.24
CPSF7-211ENST00000477890 MAP4K1Q92918 833 aa13.54□□□□□ -0.24
CPSF7-211ENST00000477890 YME1L1Q96TA2 773 aa13.54□□□□□ -0.24
CPSF7-211ENST00000477890 MAP3K14Q99558 947 aa13.54□□□□□ -0.24
CPSF7-211ENST00000477890 OSBPL7Q9BZF2 842 aa13.54□□□□□ -0.24
CPSF7-211ENST00000477890 EPHX3Q9H6B9 360 aa13.54□□□□□ -0.24
CPSF7-211ENST00000477890 UBE2ZQ9H832 354 aaPredicted RBP13.54□□□□□ -0.24
CPSF7-211ENST00000477890 LY9Q9HBG7 655 aa13.54□□□□□ -0.24
CPSF7-211ENST00000477890 SUPT16HQ9Y5B9 1047 aaKnown RBP13.54□□□□□ -0.24
CPSF7-211ENST00000477890 RBM8AQ9Y5S9 174 aaKnown RBP13.54□□□□□ -0.24
CPSF7-211ENST00000477890 NLRC5Q86WI3 1866 aa13.54□□□□□ -0.24
CPSF7-211ENST00000477890 PIK3CDO00329 1044 aa13.53□□□□□ -0.24
CPSF7-211ENST00000477890 EPC2Q52LR7 807 aa13.53□□□□□ -0.24
CPSF7-211ENST00000477890 XRRA1Q6P2D8 792 aa13.53□□□□□ -0.24
CPSF7-211ENST00000477890 NFXL1Q6ZNB6 911 aa13.53□□□□□ -0.24
CPSF7-211ENST00000477890 LMBR1Q8WVP7 490 aa13.53□□□□□ -0.24
CPSF7-211ENST00000477890 TOP1MTQ969P6 601 aa13.53□□□□□ -0.24
CPSF7-211ENST00000477890 SENP7Q9BQF6 1050 aa13.53□□□□□ -0.24
CPSF7-211ENST00000477890 LZTS2Q9BRK4 669 aa13.53□□□□□ -0.24
CPSF7-211ENST00000477890 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.52□□□□□ -0.25
CPSF7-211ENST00000477890 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.52□□□□□ -0.25
CPSF7-211ENST00000477890 CCDC69A6NI79 296 aa13.52□□□□□ -0.25
CPSF7-211ENST00000477890 PRC1O43663 620 aa13.52□□□□□ -0.25
CPSF7-211ENST00000477890 PLEKHA8P1O95397 391 aa13.52□□□□□ -0.25
CPSF7-211ENST00000477890 KCNA5P22460 613 aa13.52□□□□□ -0.25
CPSF7-211ENST00000477890 SMARCA1P28370 1054 aa13.52□□□□□ -0.25
CPSF7-211ENST00000477890 TCF7P36402 384 aaPredicted RBP13.52□□□□□ -0.25
CPSF7-211ENST00000477890 ADAM17P78536 824 aa13.52□□□□□ -0.25
CPSF7-211ENST00000477890 PTPROQ16827 1216 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms