RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 PRKAB1Q9Y478 270 aa6.6□□□□□ -1.35
SMNDC1-205ENST00000477763 PCDHB4Q9Y5E5 795 aa6.6□□□□□ -1.35
SMNDC1-205ENST00000477763 PCDHA8Q9Y5H6 950 aa6.6□□□□□ -1.35
SMNDC1-205ENST00000477763 TCRBV5S2A0A599 114 aa6.59□□□□□ -1.35
SMNDC1-205ENST00000477763 GSTA4O15217 222 aa6.59□□□□□ -1.35
SMNDC1-205ENST00000477763 CRTAMO95727 393 aa6.59□□□□□ -1.35
SMNDC1-205ENST00000477763 GNAT1P11488 350 aa6.59□□□□□ -1.35
SMNDC1-205ENST00000477763 PABPC4Q13310 644 aaKnown RBP eCLIP6.59□□□□□ -1.35
SMNDC1-205ENST00000477763 CIAPIN1Q6FI81 312 aa6.59□□□□□ -1.35
SMNDC1-205ENST00000477763 FAM129CQ86XR2 697 aa6.59□□□□□ -1.35
SMNDC1-205ENST00000477763 TMEM151BQ8IW70 566 aa6.59□□□□□ -1.35
SMNDC1-205ENST00000477763 TRIM48Q8IWZ4 208 aa6.59□□□□□ -1.35
SMNDC1-205ENST00000477763 TTLL11Q8NHH1 800 aa6.59□□□□□ -1.35
SMNDC1-205ENST00000477763 UHMK1Q8TAS1 419 aaKnown RBP6.59□□□□□ -1.35
SMNDC1-205ENST00000477763 PIP4K2CQ8TBX8 421 aa6.59□□□□□ -1.35
SMNDC1-205ENST00000477763 PANK1Q8TE04 598 aa6.59□□□□□ -1.35
SMNDC1-205ENST00000477763 NINJ1Q92982 152 aa6.59□□□□□ -1.35
SMNDC1-205ENST00000477763 FBXW5Q969U6 566 aa6.59□□□□□ -1.35
SMNDC1-205ENST00000477763 MAGEB10Q96LZ2 347 aaPredicted RBP6.59□□□□□ -1.35
SMNDC1-205ENST00000477763 KRTAP4-2Q9BYR5 136 aa6.59□□□□□ -1.35
SMNDC1-205ENST00000477763 BCAS3Q9H6U6 928 aa6.59□□□□□ -1.35
SMNDC1-205ENST00000477763 EPB41L4AQ9HCS5 686 aaPredicted RBP6.59□□□□□ -1.35
SMNDC1-205ENST00000477763 ASH2LQ9UBL3 628 aa6.59□□□□□ -1.35
SMNDC1-205ENST00000477763 FAN1Q9Y2M0 1017 aa6.59□□□□□ -1.35
SMNDC1-205ENST00000477763 PCDHA9Q9Y5H5 950 aa6.59□□□□□ -1.35
SMNDC1-205ENST00000477763 KRTAP9-7A8MTY7 169 aa6.58□□□□□ -1.36
SMNDC1-205ENST00000477763 PI3P19957 117 aa6.58□□□□□ -1.36
SMNDC1-205ENST00000477763 FOXO4P98177 505 aa6.58□□□□□ -1.36
SMNDC1-205ENST00000477763 C21orf62-AS1Q17RA5 79 aa6.58□□□□□ -1.36
SMNDC1-205ENST00000477763 KRTAP19-4Q3LI73 84 aa6.58□□□□□ -1.36
SMNDC1-205ENST00000477763 DALRD3Q5D0E6 543 aaKnown RBP6.58□□□□□ -1.36
SMNDC1-205ENST00000477763 CNKSR3Q6P9H4 555 aa6.58□□□□□ -1.36
SMNDC1-205ENST00000477763 C16orf59Q7L2K0 433 aa6.58□□□□□ -1.36
SMNDC1-205ENST00000477763 ZC3H18Q86VM9 953 aaKnown RBP6.58□□□□□ -1.36
SMNDC1-205ENST00000477763 NIM1KQ8IY84 436 aa6.58□□□□□ -1.36
SMNDC1-205ENST00000477763 ZSCAN18Q8TBC5 510 aaPredicted RBP6.58□□□□□ -1.36
SMNDC1-205ENST00000477763 KCNJ15Q99712 375 aa6.58□□□□□ -1.36
SMNDC1-205ENST00000477763 TRIM39Q9HCM9 518 aa6.58□□□□□ -1.36
SMNDC1-205ENST00000477763 HSPBP1Q9NZL4 362 aa6.58□□□□□ -1.36
SMNDC1-205ENST00000477763 NPTXRO95502 500 aa6.57□□□□□ -1.36
SMNDC1-205ENST00000477763 CYP2C8P10632 490 aa6.57□□□□□ -1.36
SMNDC1-205ENST00000477763 CFPP27918 469 aa6.57□□□□□ -1.36
SMNDC1-205ENST00000477763 MC3RP41968 323 aa6.57□□□□□ -1.36
SMNDC1-205ENST00000477763 FAM47CQ5HY64 1035 aa6.57□□□□□ -1.36
SMNDC1-205ENST00000477763 BRAPQ7Z569 592 aa6.57□□□□□ -1.36
SMNDC1-205ENST00000477763 C1QL4Q86Z23 238 aa6.57□□□□□ -1.36
SMNDC1-205ENST00000477763 LRRC56Q8IYG6 542 aaPredicted RBP6.57□□□□□ -1.36
SMNDC1-205ENST00000477763 DACT3Q96B18 629 aaPredicted RBP6.57□□□□□ -1.36
SMNDC1-205ENST00000477763 SCLYQ96I15 445 aa6.57□□□□□ -1.36
SMNDC1-205ENST00000477763 SPC25Q9HBM1 224 aa6.57□□□□□ -1.36
SMNDC1-205ENST00000477763 DTLQ9NZJ0 730 aa6.57□□□□□ -1.36
SMNDC1-205ENST00000477763 DSEQ9UL01 958 aa6.57□□□□□ -1.36
SMNDC1-205ENST00000477763 NKRFO15226 690 aaKnown RBP eCLIP6.56□□□□□ -1.36
SMNDC1-205ENST00000477763 NUAK1O60285 661 aa6.56□□□□□ -1.36
SMNDC1-205ENST00000477763 DNAJC6O75061 913 aa6.56□□□□□ -1.36
SMNDC1-205ENST00000477763 C8BP07358 591 aa6.56□□□□□ -1.36
SMNDC1-205ENST00000477763 COL6A2P12110 1019 aa6.56□□□□□ -1.36
SMNDC1-205ENST00000477763 EPHA5P54756 1037 aa6.56□□□□□ -1.36
SMNDC1-205ENST00000477763 HTRA3P83110 453 aa6.56□□□□□ -1.36
SMNDC1-205ENST00000477763 GPR19Q15760 415 aa6.56□□□□□ -1.36
SMNDC1-205ENST00000477763 ZC3H7AQ8IWR0 971 aaKnown RBP6.56□□□□□ -1.36
SMNDC1-205ENST00000477763 DHX37Q8IY37 1157 aaKnown RBP6.56□□□□□ -1.36
SMNDC1-205ENST00000477763 ARRDC4Q8NCT1 418 aa6.56□□□□□ -1.36
SMNDC1-205ENST00000477763 SMARCC2Q8TAQ2 1214 aa6.56□□□□□ -1.36
SMNDC1-205ENST00000477763 MFSD3Q96ES6 412 aa6.56□□□□□ -1.36
SMNDC1-205ENST00000477763 TOE1Q96GM8 510 aaKnown RBP6.56□□□□□ -1.36
SMNDC1-205ENST00000477763 CLUHP3Q96NS8 147 aa6.56□□□□□ -1.36
SMNDC1-205ENST00000477763 YIPF4Q9BSR8 244 aa6.56□□□□□ -1.36
SMNDC1-205ENST00000477763 INTS7Q9NVH2 962 aaKnown RBP6.56□□□□□ -1.36
SMNDC1-205ENST00000477763 MAGEC2Q9UBF1 373 aaPredicted RBP6.56□□□□□ -1.36
SMNDC1-205ENST00000477763 TCRBV16S1A1N1A0A5B0 115 aa6.55□□□□□ -1.36
SMNDC1-205ENST00000477763 RASGRP1O95267 797 aa6.55□□□□□ -1.36
SMNDC1-205ENST00000477763 LIMS1P48059 325 aa6.55□□□□□ -1.36
SMNDC1-205ENST00000477763 NKX3-2P78367 333 aa6.55□□□□□ -1.36
SMNDC1-205ENST00000477763 ST5P78524 1137 aa6.55□□□□□ -1.36
SMNDC1-205ENST00000477763 CR1LQ2VPA4 569 aa6.55□□□□□ -1.36
SMNDC1-205ENST00000477763 FILIP1Q7Z7B0 1213 aa6.55□□□□□ -1.36
SMNDC1-205ENST00000477763 SIAH1Q8IUQ4 282 aa6.55□□□□□ -1.36
SMNDC1-205ENST00000477763 NLGN4XQ8N0W4 816 aa6.55□□□□□ -1.36
SMNDC1-205ENST00000477763 LINC00482Q8N8I6 264 aa6.55□□□□□ -1.36
SMNDC1-205ENST00000477763 DDX11Q96FC9 970 aa6.55□□□□□ -1.36
SMNDC1-205ENST00000477763 PWWP2AQ96N64 755 aa6.55□□□□□ -1.36
SMNDC1-205ENST00000477763 CELF4Q9BZC1 486 aaKnown RBP6.55□□□□□ -1.36
SMNDC1-205ENST00000477763 PMF1-BGLAPU3KQ54 211 aa6.55□□□□□ -1.36
SMNDC1-205ENST00000477763 CCDC66A2RUB6 948 aa6.54□□□□□ -1.36
SMNDC1-205ENST00000477763 B4E1Z4 1266 aa6.54□□□□□ -1.36
SMNDC1-205ENST00000477763 SLC27A2O14975 620 aa6.54□□□□□ -1.36
SMNDC1-205ENST00000477763 CKMP06732 381 aa6.54□□□□□ -1.36
SMNDC1-205ENST00000477763 SRGAP2CP0DJJ0 459 aa6.54□□□□□ -1.36
SMNDC1-205ENST00000477763 PYGMP11217 842 aa6.54□□□□□ -1.36
SMNDC1-205ENST00000477763 IBSPP21815 317 aaPredicted RBP6.54□□□□□ -1.36
SMNDC1-205ENST00000477763 MASP1P48740 699 aa6.54□□□□□ -1.36
SMNDC1-205ENST00000477763 AFF3P51826 1226 aaKnown RBP6.54□□□□□ -1.36
SMNDC1-205ENST00000477763 LACTBP83111 547 aaPredicted RBP6.54□□□□□ -1.36
SMNDC1-205ENST00000477763 TUSC3Q13454 348 aa6.54□□□□□ -1.36
SMNDC1-205ENST00000477763 CRY1Q16526 586 aa6.54□□□□□ -1.36
SMNDC1-205ENST00000477763 TM4SF20Q53R12 229 aa6.54□□□□□ -1.36
SMNDC1-205ENST00000477763 TCERG1LQ5VWI1 586 aa6.54□□□□□ -1.36
SMNDC1-205ENST00000477763 CD300LDQ6UXZ3 194 aa6.54□□□□□ -1.36
SMNDC1-205ENST00000477763 KCTD1Q719H9 257 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms