RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 HEATR3Q7Z4Q2 680 aa19.74■□□□□ 0.75
SMARCD3-210ENST00000477169 GPKOWQ92917 476 aaPredicted RBP eCLIP19.74■□□□□ 0.75
SMARCD3-210ENST00000477169 SH2B1Q9NRF2 756 aaPredicted RBP19.74■□□□□ 0.75
SMARCD3-210ENST00000477169 MSRAQ9UJ68 235 aa19.74■□□□□ 0.75
SMARCD3-210ENST00000477169 FRMPD4Q14CM0 1322 aa19.74■□□□□ 0.75
SMARCD3-210ENST00000477169 CDH23Q9H251 3354 aa19.74■□□□□ 0.75
SMARCD3-210ENST00000477169 PIK3CDO00329 1044 aa19.73■□□□□ 0.75
SMARCD3-210ENST00000477169 DTNBO60941 627 aa19.73■□□□□ 0.75
SMARCD3-210ENST00000477169 CDKL5O76039 1030 aa19.73■□□□□ 0.75
SMARCD3-210ENST00000477169 GGPS1O95749 300 aa19.73■□□□□ 0.75
SMARCD3-210ENST00000477169 SCG2P13521 617 aa19.73■□□□□ 0.75
SMARCD3-210ENST00000477169 MCM2P49736 904 aa19.73■□□□□ 0.75
SMARCD3-210ENST00000477169 PSEN2P49810 448 aa19.73■□□□□ 0.75
SMARCD3-210ENST00000477169 AKAP17AQ02040 695 aaKnown RBP19.73■□□□□ 0.75
SMARCD3-210ENST00000477169 SP2Q02086 613 aa19.73■□□□□ 0.75
SMARCD3-210ENST00000477169 GRIN2CQ14957 1233 aa19.73■□□□□ 0.75
SMARCD3-210ENST00000477169 HSDL1Q3SXM5 330 aa19.73■□□□□ 0.75
SMARCD3-210ENST00000477169 GNPTABQ3T906 1256 aa19.73■□□□□ 0.75
SMARCD3-210ENST00000477169 GDF6Q6KF10 455 aaPredicted RBP19.73■□□□□ 0.75
SMARCD3-210ENST00000477169 TRIM22Q8IYM9 498 aa19.73■□□□□ 0.75
SMARCD3-210ENST00000477169 CCDC155Q8N6L0 562 aa19.73■□□□□ 0.75
SMARCD3-210ENST00000477169 C7orf31Q8N865 590 aa19.73■□□□□ 0.75
SMARCD3-210ENST00000477169 SMARCC2Q8TAQ2 1214 aa19.73■□□□□ 0.75
SMARCD3-210ENST00000477169 CAGE1Q8TC20 777 aa19.73■□□□□ 0.75
SMARCD3-210ENST00000477169 CUL5Q93034 780 aa19.73■□□□□ 0.75
SMARCD3-210ENST00000477169 SPATA33Q96N06 139 aa19.73■□□□□ 0.75
SMARCD3-210ENST00000477169 GTF2IRD1Q9UHL9 959 aa19.73■□□□□ 0.75
SMARCD3-210ENST00000477169 SLC4A7Q9Y6M7 1214 aa19.73■□□□□ 0.75
SMARCD3-210ENST00000477169 HAS3O00219 553 aa19.72■□□□□ 0.75
SMARCD3-210ENST00000477169 MEIS2O14770 477 aa19.72■□□□□ 0.75
SMARCD3-210ENST00000477169 F2P00734 622 aa19.72■□□□□ 0.75
SMARCD3-210ENST00000477169 FOSL2P15408 326 aa19.72■□□□□ 0.75
SMARCD3-210ENST00000477169 UBA1P22314 1058 aaKnown RBP19.72■□□□□ 0.75
SMARCD3-210ENST00000477169 ICAM3P32942 547 aa19.72■□□□□ 0.75
SMARCD3-210ENST00000477169 MRPS9P82933 396 aaKnown RBP19.72■□□□□ 0.75
SMARCD3-210ENST00000477169 MFSD10Q14728 455 aa19.72■□□□□ 0.75
SMARCD3-210ENST00000477169 TYW1BQ6NUM6 668 aa19.72■□□□□ 0.75
SMARCD3-210ENST00000477169 DEFB128Q7Z7B8 93 aa19.72■□□□□ 0.75
SMARCD3-210ENST00000477169 CCDC83Q8IWF9 413 aa19.72■□□□□ 0.75
SMARCD3-210ENST00000477169 NSUN7Q8NE18 718 aaKnown RBP19.72■□□□□ 0.75
SMARCD3-210ENST00000477169 ZFP91Q96JP5 570 aaPredicted RBP19.72■□□□□ 0.75
SMARCD3-210ENST00000477169 INPP4AQ96PE3 977 aaPredicted RBP19.72■□□□□ 0.75
SMARCD3-210ENST00000477169 CTAGE1Q96RT6 745 aa19.72■□□□□ 0.75
SMARCD3-210ENST00000477169 ALG1Q9BT22 464 aa19.72■□□□□ 0.75
SMARCD3-210ENST00000477169 MLXIPQ9HAP2 919 aa19.72■□□□□ 0.75
SMARCD3-210ENST00000477169 BARHL2Q9NY43 387 aa19.72■□□□□ 0.75
SMARCD3-210ENST00000477169 HDAC6Q9UBN7 1215 aa19.72■□□□□ 0.75
SMARCD3-210ENST00000477169 ZBBXA8MT70 800 aa19.71■□□□□ 0.75
SMARCD3-210ENST00000477169 hCG_1984214I3L0E3 225 aa19.71■□□□□ 0.75
SMARCD3-210ENST00000477169 STXBP3O00186 592 aa19.71■□□□□ 0.75
SMARCD3-210ENST00000477169 ACTN1P12814 892 aa19.71■□□□□ 0.75
SMARCD3-210ENST00000477169 KIAA0753Q2KHM9 967 aa19.71■□□□□ 0.75
SMARCD3-210ENST00000477169 XRRA1Q6P2D8 792 aa19.71■□□□□ 0.75
SMARCD3-210ENST00000477169 USP17L6PQ6QN14 398 aa19.71■□□□□ 0.75
SMARCD3-210ENST00000477169 ZNF713Q8N859 430 aaPredicted RBP19.71■□□□□ 0.75
SMARCD3-210ENST00000477169 MAFAQ8NHW3 353 aaPredicted RBP19.71■□□□□ 0.75
SMARCD3-210ENST00000477169 AFAP1L1Q8TED9 768 aa19.71■□□□□ 0.75
SMARCD3-210ENST00000477169 TMX3Q96JJ7 454 aa19.71■□□□□ 0.75
SMARCD3-210ENST00000477169 SCN5AQ14524 2016 aa19.7■□□□□ 0.74
SMARCD3-210ENST00000477169 SPATA31C2B4DYI2 1134 aa19.7■□□□□ 0.74
SMARCD3-210ENST00000477169 DEXIO95424 95 aa19.7■□□□□ 0.74
SMARCD3-210ENST00000477169 ZNF286BP0CG31 522 aa19.7■□□□□ 0.74
SMARCD3-210ENST00000477169 NAPAP54920 295 aa19.7■□□□□ 0.74
SMARCD3-210ENST00000477169 NEDD9Q14511 834 aa19.7■□□□□ 0.74
SMARCD3-210ENST00000477169 PSTPIP2Q9H939 334 aa19.7■□□□□ 0.74
SMARCD3-210ENST00000477169 RTEL1Q9NZ71 1219 aa19.7■□□□□ 0.74
SMARCD3-210ENST00000477169 STK36Q9NRP7 1315 aa19.7■□□□□ 0.74
SMARCD3-210ENST00000477169 TRIP12Q14669 1992 aaPredicted RBP19.7■□□□□ 0.74
SMARCD3-210ENST00000477169 EYSQ5T1H1 3165 aa19.69■□□□□ 0.74
SMARCD3-210ENST00000477169 DLL1O00548 723 aa19.69■□□□□ 0.74
SMARCD3-210ENST00000477169 FIBPO43427 364 aa19.69■□□□□ 0.74
SMARCD3-210ENST00000477169 SORBS3O60504 671 aa19.69■□□□□ 0.74
SMARCD3-210ENST00000477169 JAK2O60674 1132 aa19.69■□□□□ 0.74
SMARCD3-210ENST00000477169 PARNO95453 639 aaKnown RBP19.69■□□□□ 0.74
SMARCD3-210ENST00000477169 RBL2Q08999 1139 aa19.69■□□□□ 0.74
SMARCD3-210ENST00000477169 PCNX4Q63HM2 1172 aa19.69■□□□□ 0.74
SMARCD3-210ENST00000477169 PPP1R18Q6NYC8 613 aa19.69■□□□□ 0.74
SMARCD3-210ENST00000477169 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.69■□□□□ 0.74
SMARCD3-210ENST00000477169 C16orf70Q9BSU1 422 aa19.69■□□□□ 0.74
SMARCD3-210ENST00000477169 FTOQ9C0B1 505 aaKnown RBP eCLIP19.69■□□□□ 0.74
SMARCD3-210ENST00000477169 SLC28A3Q9HAS3 691 aa19.69■□□□□ 0.74
SMARCD3-210ENST00000477169 ORC3Q9UBD5 711 aaPredicted RBP19.69■□□□□ 0.74
SMARCD3-210ENST00000477169 UNC80Q8N2C7 3258 aa19.69■□□□□ 0.74
SMARCD3-210ENST00000477169 FDPSP14324 419 aaKnown RBP19.68■□□□□ 0.74
SMARCD3-210ENST00000477169 SELPP16109 830 aa19.68■□□□□ 0.74
SMARCD3-210ENST00000477169 ATP2A2P16615 1042 aaKnown RBP19.68■□□□□ 0.74
SMARCD3-210ENST00000477169 PTK7Q13308 1070 aa19.68■□□□□ 0.74
SMARCD3-210ENST00000477169 DHX38Q92620 1227 aaKnown RBP19.68■□□□□ 0.74
SMARCD3-210ENST00000477169 AIFM3Q96NN9 605 aa19.68■□□□□ 0.74
SMARCD3-210ENST00000477169 LLPHQ9BRT6 129 aaKnown RBP19.68■□□□□ 0.74
SMARCD3-210ENST00000477169 NKX2-4Q9H2Z4 354 aa19.68■□□□□ 0.74
SMARCD3-210ENST00000477169 BCAS3Q9H6U6 928 aa19.68■□□□□ 0.74
SMARCD3-210ENST00000477169 PCDHA11Q9Y5I1 949 aa19.68■□□□□ 0.74
SMARCD3-210ENST00000477169 TANC1Q9C0D5 1861 aa19.67■□□□□ 0.74
SMARCD3-210ENST00000477169 SEMA3FQ13275 785 aa19.67■□□□□ 0.74
SMARCD3-210ENST00000477169 METTL7BQ6UX53 244 aa19.67■□□□□ 0.74
SMARCD3-210ENST00000477169 NLRX1Q86UT6 975 aa19.67■□□□□ 0.74
SMARCD3-210ENST00000477169 PHOSPHO2Q8TCD6 241 aa19.67■□□□□ 0.74
SMARCD3-210ENST00000477169 SENP7Q9BQF6 1050 aa19.67■□□□□ 0.74
SMARCD3-210ENST00000477169 RIC8AQ9NPQ8 531 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms