RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 PPP1R3GB7ZBB8 358 aa16.2■□□□□ 0.18
COL4A6-206ENST00000477085 CHMP2AO43633 222 aa16.2■□□□□ 0.18
COL4A6-206ENST00000477085 SLITRK3O94933 977 aa16.2■□□□□ 0.18
COL4A6-206ENST00000477085 ZBTB48P10074 688 aaPredicted RBP16.2■□□□□ 0.18
COL4A6-206ENST00000477085 CCND2P30279 289 aa16.2■□□□□ 0.18
COL4A6-206ENST00000477085 KMT5BQ4FZB7 885 aa16.2■□□□□ 0.18
COL4A6-206ENST00000477085 XRRA1Q6P2D8 792 aa16.2■□□□□ 0.18
COL4A6-206ENST00000477085 SV2BQ7L1I2 683 aa16.2■□□□□ 0.18
COL4A6-206ENST00000477085 ANKRD23Q86SG2 305 aa16.2■□□□□ 0.18
COL4A6-206ENST00000477085 MLKLQ8NB16 471 aa16.2■□□□□ 0.18
COL4A6-206ENST00000477085 PDLIM2Q96JY6 352 aa16.2■□□□□ 0.18
COL4A6-206ENST00000477085 PPP1R9BQ96SB3 815 aa16.2■□□□□ 0.18
COL4A6-206ENST00000477085 RIT2Q99578 217 aa16.2■□□□□ 0.18
COL4A6-206ENST00000477085 FBXO40Q9UH90 709 aa16.2■□□□□ 0.18
COL4A6-206ENST00000477085 SLC45A1Q9Y2W3 748 aa16.2■□□□□ 0.18
COL4A6-206ENST00000477085 SLC26A4O43511 780 aa16.19■□□□□ 0.18
COL4A6-206ENST00000477085 SLC25A27O95847 323 aa16.19■□□□□ 0.18
COL4A6-206ENST00000477085 MYL1P05976 194 aa16.19■□□□□ 0.18
COL4A6-206ENST00000477085 ERVK-9P63128 1117 aa16.19■□□□□ 0.18
COL4A6-206ENST00000477085 ERVK-24P63145 666 aa16.19■□□□□ 0.18
COL4A6-206ENST00000477085 CYP4A11Q02928 519 aa16.19■□□□□ 0.18
COL4A6-206ENST00000477085 INPP4AQ96PE3 977 aaPredicted RBP16.19■□□□□ 0.18
COL4A6-206ENST00000477085 POLR3CQ9BUI4 534 aaPredicted RBP16.19■□□□□ 0.18
COL4A6-206ENST00000477085 PORCNQ9H237 461 aa16.19■□□□□ 0.18
COL4A6-206ENST00000477085 BCAS3Q9H6U6 928 aa16.19■□□□□ 0.18
COL4A6-206ENST00000477085 WRAP73Q9P2S5 460 aaPredicted RBP16.19■□□□□ 0.18
COL4A6-206ENST00000477085 KDM3AQ9Y4C1 1321 aa16.19■□□□□ 0.18
COL4A6-206ENST00000477085 TESPA1A2RU30 521 aaPredicted RBP16.18■□□□□ 0.18
COL4A6-206ENST00000477085 DDX39AO00148 427 aaKnown RBP16.18■□□□□ 0.18
COL4A6-206ENST00000477085 CTTNQ14247 550 aaKnown RBP16.18■□□□□ 0.18
COL4A6-206ENST00000477085 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.18■□□□□ 0.18
COL4A6-206ENST00000477085 SAPCD2Q86UD0 394 aa16.18■□□□□ 0.18
COL4A6-206ENST00000477085 RASAL3Q86YV0 1011 aa16.18■□□□□ 0.18
COL4A6-206ENST00000477085 FAM133AQ8N9E0 248 aa16.18■□□□□ 0.18
COL4A6-206ENST00000477085 DYDC2Q96IM9 177 aa16.18■□□□□ 0.18
COL4A6-206ENST00000477085 FGD4Q96M96 766 aa16.18■□□□□ 0.18
COL4A6-206ENST00000477085 NT5C3AQ9H0P0 336 aa16.18■□□□□ 0.18
COL4A6-206ENST00000477085 PFASO15067 1338 aa16.18■□□□□ 0.18
COL4A6-206ENST00000477085 KIF3CO14782 793 aa16.18■□□□□ 0.18
COL4A6-206ENST00000477085 ADCY5O95622 1261 aa16.18■□□□□ 0.18
COL4A6-206ENST00000477085 PGK2P07205 417 aa16.18■□□□□ 0.18
COL4A6-206ENST00000477085 PLA2G4BP0C869 781 aa16.18■□□□□ 0.18
COL4A6-206ENST00000477085 SLC12A3P55017 1021 aa16.18■□□□□ 0.18
COL4A6-206ENST00000477085 KCNB1Q14721 858 aa16.18■□□□□ 0.18
COL4A6-206ENST00000477085 HAUS3Q68CZ6 603 aa16.18■□□□□ 0.18
COL4A6-206ENST00000477085 DNERQ8NFT8 737 aa16.18■□□□□ 0.18
COL4A6-206ENST00000477085 ERMNQ8TAM6 284 aa16.18■□□□□ 0.18
COL4A6-206ENST00000477085 TEKT3Q9BXF9 490 aa16.18■□□□□ 0.18
COL4A6-206ENST00000477085 EFCC1Q9HA90 598 aa16.18■□□□□ 0.18
COL4A6-206ENST00000477085 PNMA3Q9UL41 463 aa16.18■□□□□ 0.18
COL4A6-206ENST00000477085 GDAQ9Y2T3 454 aa16.18■□□□□ 0.18
COL4A6-206ENST00000477085 TELO2Q9Y4R8 837 aa16.18■□□□□ 0.18
COL4A6-206ENST00000477085 DNAJC25-GNG10A0A024R161 153 aa16.17■□□□□ 0.18
COL4A6-206ENST00000477085 BECN2A8MW95 431 aa16.17■□□□□ 0.18
COL4A6-206ENST00000477085 IKBKBO14920 756 aa16.17■□□□□ 0.18
COL4A6-206ENST00000477085 ZBTB39O15060 712 aa16.17■□□□□ 0.18
COL4A6-206ENST00000477085 RHOBTB3O94955 611 aa16.17■□□□□ 0.18
COL4A6-206ENST00000477085 ALDH5A1P51649 535 aaPredicted RBP16.17■□□□□ 0.18
COL4A6-206ENST00000477085 ARSHQ5FYA8 562 aa16.17■□□□□ 0.18
COL4A6-206ENST00000477085 ZNF658Q5TYW1 1059 aaPredicted RBP16.17■□□□□ 0.18
COL4A6-206ENST00000477085 CNNM4Q6P4Q7 775 aa16.17■□□□□ 0.18
COL4A6-206ENST00000477085 ANKRD13CQ8N6S4 541 aa16.17■□□□□ 0.18
COL4A6-206ENST00000477085 DDX12PQ92771 950 aa16.17■□□□□ 0.18
COL4A6-206ENST00000477085 HPS3Q969F9 1004 aa16.17■□□□□ 0.18
COL4A6-206ENST00000477085 DNAJC19Q96DA6 116 aa16.17■□□□□ 0.18
COL4A6-206ENST00000477085 IWS1Q96ST2 819 aa16.17■□□□□ 0.18
COL4A6-206ENST00000477085 NPHP3-ACAD11A0A0J9YXS1 232 aa16.16■□□□□ 0.18
COL4A6-206ENST00000477085 POTEB2H3BUK9 544 aa16.16■□□□□ 0.18
COL4A6-206ENST00000477085 CCNE2O96020 404 aa16.16■□□□□ 0.18
COL4A6-206ENST00000477085 EDNRBP24530 442 aa16.16■□□□□ 0.18
COL4A6-206ENST00000477085 ZNF157P51786 506 aaPredicted RBP16.16■□□□□ 0.18
COL4A6-206ENST00000477085 PLCB2Q00722 1185 aa16.16■□□□□ 0.18
COL4A6-206ENST00000477085 AMPD3Q01432 767 aa16.16■□□□□ 0.18
COL4A6-206ENST00000477085 EPHA7Q15375 998 aa16.16■□□□□ 0.18
COL4A6-206ENST00000477085 DYMQ7RTS9 669 aa16.16■□□□□ 0.18
COL4A6-206ENST00000477085 TRMT44Q8IYL2 757 aaKnown RBP16.16■□□□□ 0.18
COL4A6-206ENST00000477085 GPRC5AQ8NFJ5 357 aa16.16■□□□□ 0.18
COL4A6-206ENST00000477085 GPRASP2Q96D09 838 aa16.16■□□□□ 0.18
COL4A6-206ENST00000477085 TRPM7Q96QT4 1865 aa16.16■□□□□ 0.18
COL4A6-206ENST00000477085 SPATA31C2B4DYI2 1134 aa16.15■□□□□ 0.18
COL4A6-206ENST00000477085 GOLGA6L19H0YKK7 550 aa16.15■□□□□ 0.18
COL4A6-206ENST00000477085 COBLO75128 1261 aa16.15■□□□□ 0.18
COL4A6-206ENST00000477085 KCNA2P16389 499 aa16.15■□□□□ 0.18
COL4A6-206ENST00000477085 CYP11B2P19099 503 aa16.15■□□□□ 0.18
COL4A6-206ENST00000477085 PRCPP42785 496 aa16.15■□□□□ 0.18
COL4A6-206ENST00000477085 ASIC1P78348 528 aa16.15■□□□□ 0.18
COL4A6-206ENST00000477085 SP2Q02086 613 aa16.15■□□□□ 0.18
COL4A6-206ENST00000477085 CCDC173Q0VFZ6 552 aa16.15■□□□□ 0.18
COL4A6-206ENST00000477085 TPH2Q8IWU9 490 aa16.15■□□□□ 0.18
COL4A6-206ENST00000477085 GIMAP8Q8ND71 665 aaPredicted RBP16.15■□□□□ 0.18
COL4A6-206ENST00000477085 SMCR8Q8TEV9 937 aaPredicted RBP16.15■□□□□ 0.18
COL4A6-206ENST00000477085 MROH8Q9H579 483 aa16.15■□□□□ 0.18
COL4A6-206ENST00000477085 TUFT1Q9NNX1 390 aa16.15■□□□□ 0.18
COL4A6-206ENST00000477085 RMND1Q9NWS8 449 aa16.15■□□□□ 0.18
COL4A6-206ENST00000477085 MAPK8IP1Q9UQF2 711 aa16.15■□□□□ 0.18
COL4A6-206ENST00000477085 STK24Q9Y6E0 443 aa16.15■□□□□ 0.18
COL4A6-206ENST00000477085 SSBP05455 408 aaKnown RBP eCLIP16.15■□□□□ 0.18
COL4A6-206ENST00000477085 FCER1AP12319 257 aa16.15■□□□□ 0.18
COL4A6-206ENST00000477085 MYL5Q02045 173 aa16.15■□□□□ 0.18
COL4A6-206ENST00000477085 EHHADHQ08426 723 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms