RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 KCTD10Q9H3F6 313 aa23.29■■□□□ 1.32
LIMS2-214ENST00000476932 VIPAS39Q9H9C1 493 aa23.29■■□□□ 1.32
LIMS2-214ENST00000476932 PCDHA1Q9Y5I3 950 aa23.29■■□□□ 1.32
LIMS2-214ENST00000476932 TLR2O60603 784 aa23.28■■□□□ 1.32
LIMS2-214ENST00000476932 MYBL2P10244 700 aa23.28■■□□□ 1.32
LIMS2-214ENST00000476932 MCM3P25205 808 aa23.28■■□□□ 1.32
LIMS2-214ENST00000476932 STAT3P40763 770 aa23.28■■□□□ 1.32
LIMS2-214ENST00000476932 USP11P51784 963 aa23.28■■□□□ 1.32
LIMS2-214ENST00000476932 CACNB3P54284 484 aa23.28■■□□□ 1.32
LIMS2-214ENST00000476932 MARSP56192 900 aaKnown RBP23.28■■□□□ 1.32
LIMS2-214ENST00000476932 CACNB1Q02641 598 aaPredicted RBP23.28■■□□□ 1.32
LIMS2-214ENST00000476932 GFPT1Q06210 699 aaPredicted RBP23.28■■□□□ 1.32
LIMS2-214ENST00000476932 CDC37Q16543 378 aaPredicted RBP23.28■■□□□ 1.32
LIMS2-214ENST00000476932 ARHGAP27Q6ZUM4 889 aa23.28■■□□□ 1.32
LIMS2-214ENST00000476932 GPBP1Q86WP2 473 aa23.28■■□□□ 1.32
LIMS2-214ENST00000476932 TRIM59Q8IWR1 403 aa23.28■■□□□ 1.32
LIMS2-214ENST00000476932 ZC3H3Q8IXZ2 948 aaKnown RBP23.28■■□□□ 1.32
LIMS2-214ENST00000476932 SCFD1Q8WVM8 642 aa23.28■■□□□ 1.32
LIMS2-214ENST00000476932 TANGO6Q9C0B7 1094 aa23.28■■□□□ 1.32
LIMS2-214ENST00000476932 SSU72P8A0A1W2PR75 194 aa23.28■■□□□ 1.32
LIMS2-214ENST00000476932 FRMD3A2A2Y4 597 aa23.28■■□□□ 1.32
LIMS2-214ENST00000476932 MEIS2O14770 477 aa23.28■■□□□ 1.32
LIMS2-214ENST00000476932 MED24O75448 989 aa23.28■■□□□ 1.32
LIMS2-214ENST00000476932 ZMYND10O75800 440 aa23.28■■□□□ 1.32
LIMS2-214ENST00000476932 PRLRP16471 622 aa23.28■■□□□ 1.32
LIMS2-214ENST00000476932 SPIRE1Q08AE8 756 aa23.28■■□□□ 1.32
LIMS2-214ENST00000476932 CCDC40Q4G0X9 1142 aa23.28■■□□□ 1.32
LIMS2-214ENST00000476932 SIAH1Q8IUQ4 282 aa23.28■■□□□ 1.32
LIMS2-214ENST00000476932 DCAF4Q8WV16 495 aa23.28■■□□□ 1.32
LIMS2-214ENST00000476932 ZDHHC15Q96MV8 337 aa23.28■■□□□ 1.32
LIMS2-214ENST00000476932 KCNQ5Q9NR82 932 aa23.28■■□□□ 1.32
LIMS2-214ENST00000476932 CALCOCO1Q9P1Z2 691 aa23.28■■□□□ 1.32
LIMS2-214ENST00000476932 CEP72Q9P209 647 aa23.28■■□□□ 1.32
LIMS2-214ENST00000476932 RBAK-RBAKDNI3L0D1 243 aa23.27■■□□□ 1.32
LIMS2-214ENST00000476932 NPR1P16066 1061 aa23.27■■□□□ 1.32
LIMS2-214ENST00000476932 HSPA1LP34931 641 aa23.27■■□□□ 1.32
LIMS2-214ENST00000476932 AARSP49588 968 aaKnown RBP eCLIP23.27■■□□□ 1.32
LIMS2-214ENST00000476932 ARSHQ5FYA8 562 aa23.27■■□□□ 1.32
LIMS2-214ENST00000476932 CACNA2D4Q7Z3S7 1137 aa23.27■■□□□ 1.32
LIMS2-214ENST00000476932 NELFCDQ8IXH7 590 aa23.27■■□□□ 1.32
LIMS2-214ENST00000476932 CCDC65Q8IXS2 484 aa23.27■■□□□ 1.32
LIMS2-214ENST00000476932 FAM71BQ8TC56 605 aa23.27■■□□□ 1.32
LIMS2-214ENST00000476932 DRC1Q96MC2 740 aa23.27■■□□□ 1.32
LIMS2-214ENST00000476932 GLT8D2Q9H1C3 349 aa23.27■■□□□ 1.32
LIMS2-214ENST00000476932 TRPC5Q9UL62 973 aaPredicted RBP23.27■■□□□ 1.32
LIMS2-214ENST00000476932 DDTLA6NHG4 134 aaPredicted RBP23.26■■□□□ 1.31
LIMS2-214ENST00000476932 SLC26A4O43511 780 aa23.26■■□□□ 1.31
LIMS2-214ENST00000476932 SLC1A4P43007 532 aa23.26■■□□□ 1.31
LIMS2-214ENST00000476932 MAGEA1P43355 309 aa23.26■■□□□ 1.31
LIMS2-214ENST00000476932 SLC12A3P55017 1021 aa23.26■■□□□ 1.31
LIMS2-214ENST00000476932 NLRC4Q9NPP4 1024 aa23.26■■□□□ 1.31
LIMS2-214ENST00000476932 BMP2KQ9NSY1 1161 aaPredicted RBP23.26■■□□□ 1.31
LIMS2-214ENST00000476932 NYAP2Q9P242 653 aa23.26■■□□□ 1.31
LIMS2-214ENST00000476932 ITIH3Q06033 890 aa23.26■■□□□ 1.31
LIMS2-214ENST00000476932 SH3BP5LQ7L8J4 393 aa23.26■■□□□ 1.31
LIMS2-214ENST00000476932 GSPT2Q8IYD1 628 aaKnown RBP23.26■■□□□ 1.31
LIMS2-214ENST00000476932 MMGT1Q8N4V1 131 aa23.26■■□□□ 1.31
LIMS2-214ENST00000476932 ETNPPLQ8TBG4 499 aa23.26■■□□□ 1.31
LIMS2-214ENST00000476932 OSBPL9Q96SU4 736 aa23.26■■□□□ 1.31
LIMS2-214ENST00000476932 HPCAL4Q9UM19 191 aa23.26■■□□□ 1.31
LIMS2-214ENST00000476932 POTEFA5A3E0 1075 aa23.25■■□□□ 1.31
LIMS2-214ENST00000476932 POTEIP0CG38 1075 aa23.25■■□□□ 1.31
LIMS2-214ENST00000476932 APBA1Q02410 837 aa23.25■■□□□ 1.31
LIMS2-214ENST00000476932 MAP9Q49MG5 647 aa23.25■■□□□ 1.31
LIMS2-214ENST00000476932 FAM83BQ5T0W9 1011 aa23.25■■□□□ 1.31
LIMS2-214ENST00000476932 SLFN13Q68D06 897 aa23.25■■□□□ 1.31
LIMS2-214ENST00000476932 NFRKBQ6P4R8 1299 aa23.25■■□□□ 1.31
LIMS2-214ENST00000476932 POTEGQ6S5H5 508 aa23.25■■□□□ 1.31
LIMS2-214ENST00000476932 POTEEQ6S8J3 1075 aa23.25■■□□□ 1.31
LIMS2-214ENST00000476932 MOXD1Q6UVY6 613 aa23.25■■□□□ 1.31
LIMS2-214ENST00000476932 SYN2Q92777 582 aaPredicted RBP23.25■■□□□ 1.31
LIMS2-214ENST00000476932 LSM14BQ9BX40 385 aaKnown RBP23.25■■□□□ 1.31
LIMS2-214ENST00000476932 FAM198AQ9UFP1 575 aa23.25■■□□□ 1.31
LIMS2-214ENST00000476932 LMAN1P49257 510 aa23.25■■□□□ 1.31
LIMS2-214ENST00000476932 TCP10Q12799 353 aa23.25■■□□□ 1.31
LIMS2-214ENST00000476932 CCDC102AQ96A19 550 aa23.25■■□□□ 1.31
LIMS2-214ENST00000476932 KANSL2Q9H9L4 492 aa23.25■■□□□ 1.31
LIMS2-214ENST00000476932 MED4Q9NPJ6 270 aa23.25■■□□□ 1.31
LIMS2-214ENST00000476932 SYF2O95926 243 aaKnown RBP23.24■■□□□ 1.31
LIMS2-214ENST00000476932 RAD51AP2Q09MP3 1159 aa23.24■■□□□ 1.31
LIMS2-214ENST00000476932 HERC4Q5GLZ8 1057 aaPredicted RBP23.24■■□□□ 1.31
LIMS2-214ENST00000476932 IQCEQ6IPM2 695 aa23.24■■□□□ 1.31
LIMS2-214ENST00000476932 CCNI2Q6ZMN8 369 aaPredicted RBP23.24■■□□□ 1.31
LIMS2-214ENST00000476932 ANKRD13CQ8N6S4 541 aa23.24■■□□□ 1.31
LIMS2-214ENST00000476932 LENG9Q96B70 501 aa23.24■■□□□ 1.31
LIMS2-214ENST00000476932 DHX36Q9H2U1 1008 aaKnown RBP23.24■■□□□ 1.31
LIMS2-214ENST00000476932 HYOU1Q9Y4L1 999 aa23.24■■□□□ 1.31
LIMS2-214ENST00000476932 SMCHD1A6NHR9 2005 aa23.24■■□□□ 1.31
LIMS2-214ENST00000476932 SLX4Q8IY92 1834 aa23.24■■□□□ 1.31
LIMS2-214ENST00000476932 RAD21O60216 631 aa23.24■■□□□ 1.31
LIMS2-214ENST00000476932 TRIM37O94972 964 aa23.24■■□□□ 1.31
LIMS2-214ENST00000476932 GNA14O95837 355 aa23.24■■□□□ 1.31
LIMS2-214ENST00000476932 ARHGAP4P98171 946 aa23.24■■□□□ 1.31
LIMS2-214ENST00000476932 AP3B2Q13367 1082 aa23.24■■□□□ 1.31
LIMS2-214ENST00000476932 EZH2Q15910 746 aaKnown RBP23.24■■□□□ 1.31
LIMS2-214ENST00000476932 MUM1L1Q5H9M0 696 aa23.24■■□□□ 1.31
LIMS2-214ENST00000476932 ALS2CR12Q96Q35 445 aa23.24■■□□□ 1.31
LIMS2-214ENST00000476932 DBNDD1Q9H9R9 158 aa23.24■■□□□ 1.31
LIMS2-214ENST00000476932 PITPNM2Q9BZ72 1349 aa23.23■■□□□ 1.31
LIMS2-214ENST00000476932 NCK2O43639 380 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms