RNA–Protein interactions for RNA: ENST00000476807.5

HDLBP-235, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 1,070 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-235ENST00000476807 FIBPO43427 364 aa13.12□□□□□ -0.31
HDLBP-235ENST00000476807 GJB5O95377 273 aa13.12□□□□□ -0.31
HDLBP-235ENST00000476807 KIF5BP33176 963 aa13.12□□□□□ -0.31
HDLBP-235ENST00000476807 GRB10Q13322 594 aa13.12□□□□□ -0.31
HDLBP-235ENST00000476807 IKBKEQ14164 716 aa13.12□□□□□ -0.31
HDLBP-235ENST00000476807 NEDD9Q14511 834 aa13.12□□□□□ -0.31
HDLBP-235ENST00000476807 SKIV2LQ15477 1246 aaKnown RBP13.12□□□□□ -0.31
HDLBP-235ENST00000476807 RRP36Q96EU6 259 aaKnown RBP13.12□□□□□ -0.31
HDLBP-235ENST00000476807 UHRF1Q96T88 793 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-235ENST00000476807 ZBED2Q9BTP6 218 aa13.12□□□□□ -0.31
HDLBP-235ENST00000476807 TUT1Q9H6E5 874 aaKnown RBP13.12□□□□□ -0.31
HDLBP-235ENST00000476807 BCAS3Q9H6U6 928 aa13.12□□□□□ -0.31
HDLBP-235ENST00000476807 EMSYQ7Z589 1322 aa13.12□□□□□ -0.31
HDLBP-235ENST00000476807 SPATA31C2B4DYI2 1134 aa13.11□□□□□ -0.31
HDLBP-235ENST00000476807 RBAK-RBAKDNI3L0D1 243 aa13.11□□□□□ -0.31
HDLBP-235ENST00000476807 PIK3CDO00329 1044 aa13.11□□□□□ -0.31
HDLBP-235ENST00000476807 SH2B2O14492 632 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-235ENST00000476807 MEIS2O14770 477 aa13.11□□□□□ -0.31
HDLBP-235ENST00000476807 PRC1O43663 620 aa13.11□□□□□ -0.31
HDLBP-235ENST00000476807 LPXNO60711 386 aa13.11□□□□□ -0.31
HDLBP-235ENST00000476807 LGR5O75473 907 aa13.11□□□□□ -0.31
HDLBP-235ENST00000476807 SMIM10L2AP0DMW4 78 aa13.11□□□□□ -0.31
HDLBP-235ENST00000476807 SMIM10L2BP0DMW5 78 aa13.11□□□□□ -0.31
HDLBP-235ENST00000476807 SMARCA1P28370 1054 aa13.11□□□□□ -0.31
HDLBP-235ENST00000476807 THPOP40225 353 aa13.11□□□□□ -0.31
HDLBP-235ENST00000476807 TFF2Q03403 129 aa13.11□□□□□ -0.31
HDLBP-235ENST00000476807 AAK1Q2M2I8 961 aa13.11□□□□□ -0.31
HDLBP-235ENST00000476807 PCNX4Q63HM2 1172 aa13.11□□□□□ -0.31
HDLBP-235ENST00000476807 USP17L6PQ6QN14 398 aa13.11□□□□□ -0.31
HDLBP-235ENST00000476807 CASC1Q6TDU7 716 aa13.11□□□□□ -0.31
HDLBP-235ENST00000476807 CYFIP1Q7L576 1253 aa13.11□□□□□ -0.31
HDLBP-235ENST00000476807 SMARCC2Q8TAQ2 1214 aa13.11□□□□□ -0.31
HDLBP-235ENST00000476807 CUL5Q93034 780 aa13.11□□□□□ -0.31
HDLBP-235ENST00000476807 ATP6V0A1Q93050 837 aa13.11□□□□□ -0.31
HDLBP-235ENST00000476807 RAD9AQ99638 391 aa13.11□□□□□ -0.31
HDLBP-235ENST00000476807 GPR20Q99678 358 aa13.11□□□□□ -0.31
HDLBP-235ENST00000476807 LZTS2Q9BRK4 669 aa13.11□□□□□ -0.31
HDLBP-235ENST00000476807 LSG1Q9H089 658 aaKnown RBP13.11□□□□□ -0.31
HDLBP-235ENST00000476807 RTEL1Q9NZ71 1219 aa13.11□□□□□ -0.31
HDLBP-235ENST00000476807 SEC63Q9UGP8 760 aaKnown RBP13.11□□□□□ -0.31
HDLBP-235ENST00000476807 BAZ2BQ9UIF8 2168 aaKnown RBP13.11□□□□□ -0.31
HDLBP-235ENST00000476807 PRRC2BQ5JSZ5 2229 aaKnown RBP13.11□□□□□ -0.31
HDLBP-235ENST00000476807 TRIP12Q14669 1992 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-235ENST00000476807 PTPRSQ13332 1948 aa13.1□□□□□ -0.31
HDLBP-235ENST00000476807 RSPH10B2B2RC85 870 aa13.1□□□□□ -0.31
HDLBP-235ENST00000476807 TREHO43280 583 aa13.1□□□□□ -0.31
HDLBP-235ENST00000476807 PLEKHA8P1O95397 391 aa13.1□□□□□ -0.31
HDLBP-235ENST00000476807 RSPH10BP0C881 870 aa13.1□□□□□ -0.31
HDLBP-235ENST00000476807 BMP1P13497 986 aa13.1□□□□□ -0.31
HDLBP-235ENST00000476807 MCM5P33992 734 aa13.1□□□□□ -0.31
HDLBP-235ENST00000476807 GNAQP50148 359 aa13.1□□□□□ -0.31
HDLBP-235ENST00000476807 MKRN4PQ13434 485 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-235ENST00000476807 XRRA1Q6P2D8 792 aa13.1□□□□□ -0.31
HDLBP-235ENST00000476807 NFXL1Q6ZNB6 911 aa13.1□□□□□ -0.31
HDLBP-235ENST00000476807 TRIM50Q86XT4 487 aa13.1□□□□□ -0.31
HDLBP-235ENST00000476807 TMTC2Q8N394 836 aa13.1□□□□□ -0.31
HDLBP-235ENST00000476807 SRBD1Q8N5C6 995 aaKnown RBP13.1□□□□□ -0.31
HDLBP-235ENST00000476807 DBF4BQ8NFT6 615 aa13.1□□□□□ -0.31
HDLBP-235ENST00000476807 GDPD5Q8WTR4 605 aa13.1□□□□□ -0.31
HDLBP-235ENST00000476807 TMEM87BQ96K49 555 aa13.1□□□□□ -0.31
HDLBP-235ENST00000476807 SENP7Q9BQF6 1050 aa13.1□□□□□ -0.31
HDLBP-235ENST00000476807 USP26Q9BXU7 913 aa13.1□□□□□ -0.31
HDLBP-235ENST00000476807 LINC01553A4QN01 128 aa13.09□□□□□ -0.31
HDLBP-235ENST00000476807 CCDC69A6NI79 296 aa13.09□□□□□ -0.31
HDLBP-235ENST00000476807 SLC27A2O14975 620 aa13.09□□□□□ -0.31
HDLBP-235ENST00000476807 CAND2O75155 1236 aa13.09□□□□□ -0.31
HDLBP-235ENST00000476807 RXRAP19793 462 aa13.09□□□□□ -0.31
HDLBP-235ENST00000476807 ERVK-21P61565 698 aa13.09□□□□□ -0.31
HDLBP-235ENST00000476807 COL9A3Q14050 684 aaPredicted RBP13.09□□□□□ -0.31
HDLBP-235ENST00000476807 PLEKHG4Q58EX7 1191 aa13.09□□□□□ -0.31
HDLBP-235ENST00000476807 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.09□□□□□ -0.31
HDLBP-235ENST00000476807 TGS1Q96RS0 853 aaKnown RBP13.09□□□□□ -0.31
HDLBP-235ENST00000476807 ESYT1Q9BSJ8 1104 aa13.09□□□□□ -0.31
HDLBP-235ENST00000476807 RNPEPQ9H4A4 650 aa13.09□□□□□ -0.31
HDLBP-235ENST00000476807 ZNF215Q9UL58 517 aaPredicted RBP13.09□□□□□ -0.31
HDLBP-235ENST00000476807 COG5Q9UP83 839 aa13.09□□□□□ -0.31
HDLBP-235ENST00000476807 TELO2Q9Y4R8 837 aa13.09□□□□□ -0.31
HDLBP-235ENST00000476807 MYH7BA7E2Y1 1941 aa13.08□□□□□ -0.32
HDLBP-235ENST00000476807 AMHP03971 560 aa13.08□□□□□ -0.32
HDLBP-235ENST00000476807 CALM1P0DP23 149 aa13.08□□□□□ -0.32
HDLBP-235ENST00000476807 CALM2P0DP24 149 aa13.08□□□□□ -0.32
HDLBP-235ENST00000476807 CALM3P0DP25 149 aa13.08□□□□□ -0.32
HDLBP-235ENST00000476807 GNAT1P11488 350 aa13.08□□□□□ -0.32
HDLBP-235ENST00000476807 LIFRP42702 1097 aa13.08□□□□□ -0.32
HDLBP-235ENST00000476807 KCNQ1P51787 676 aa13.08□□□□□ -0.32
HDLBP-235ENST00000476807 ADAM17P78536 824 aa13.08□□□□□ -0.32
HDLBP-235ENST00000476807 SP4Q02446 784 aa13.08□□□□□ -0.32
HDLBP-235ENST00000476807 CREB3L3Q68CJ9 461 aa13.08□□□□□ -0.32
HDLBP-235ENST00000476807 FAM117BQ6P1L5 589 aa13.08□□□□□ -0.32
HDLBP-235ENST00000476807 NLRX1Q86UT6 975 aa13.08□□□□□ -0.32
HDLBP-235ENST00000476807 MYOCDQ8IZQ8 938 aa13.08□□□□□ -0.32
HDLBP-235ENST00000476807 CMTR1Q8N1G2 835 aaKnown RBP13.08□□□□□ -0.32
HDLBP-235ENST00000476807 SUGCTQ9HAC7 445 aa13.08□□□□□ -0.32
HDLBP-235ENST00000476807 SETD4Q9NVD3 440 aa13.08□□□□□ -0.32
HDLBP-235ENST00000476807 LMCD1Q9NZU5 365 aa13.08□□□□□ -0.32
HDLBP-235ENST00000476807 MTUS1Q9ULD2 1270 aa13.08□□□□□ -0.32
HDLBP-235ENST00000476807 COL4A4P53420 1690 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-235ENST00000476807 CTSHP09668 335 aa13.07□□□□□ -0.32
HDLBP-235ENST00000476807 HTRA4P83105 476 aaPredicted RBP13.07□□□□□ -0.32
HDLBP-235ENST00000476807 NECTIN1Q15223 517 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms