RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 RTN1Q16799 776 aa12.4□□□□□ -0.42
SEC13-214ENST00000476597 WWC2Q6AWC2 1192 aa12.4□□□□□ -0.42
SEC13-214ENST00000476597 TRAF7Q6Q0C0 670 aa12.4□□□□□ -0.42
SEC13-214ENST00000476597 LRRC8DQ7L1W4 858 aa12.4□□□□□ -0.42
SEC13-214ENST00000476597 HEATR3Q7Z4Q2 680 aa12.4□□□□□ -0.42
SEC13-214ENST00000476597 TEX2Q8IWB9 1127 aa12.4□□□□□ -0.42
SEC13-214ENST00000476597 GIMAP8Q8ND71 665 aaPredicted RBP12.4□□□□□ -0.42
SEC13-214ENST00000476597 GPRASP2Q96D09 838 aa12.4□□□□□ -0.42
SEC13-214ENST00000476597 NKX2-4Q9H2Z4 354 aa12.4□□□□□ -0.42
SEC13-214ENST00000476597 SLC28A3Q9HAS3 691 aa12.4□□□□□ -0.42
SEC13-214ENST00000476597 PCDHA6Q9UN73 950 aa12.4□□□□□ -0.42
SEC13-214ENST00000476597 TELO2Q9Y4R8 837 aa12.4□□□□□ -0.42
SEC13-214ENST00000476597 PCDHA8Q9Y5H6 950 aa12.4□□□□□ -0.42
SEC13-214ENST00000476597 SNX14Q9Y5W7 946 aa12.4□□□□□ -0.42
SEC13-214ENST00000476597 UBIAD1Q9Y5Z9 338 aa12.4□□□□□ -0.42
SEC13-214ENST00000476597 CNTNAP5Q8WYK1 1306 aa12.39□□□□□ -0.43
SEC13-214ENST00000476597 KLF18A0A0U1RQI7 1052 aa12.39□□□□□ -0.43
SEC13-214ENST00000476597 C17orf102A2RUQ5 167 aa12.39□□□□□ -0.43
SEC13-214ENST00000476597 SPDYE3A6NKU9 549 aa12.39□□□□□ -0.43
SEC13-214ENST00000476597 DLL1O00548 723 aa12.39□□□□□ -0.43
SEC13-214ENST00000476597 MAFGO15525 162 aa12.39□□□□□ -0.43
SEC13-214ENST00000476597 NBNO60934 754 aa12.39□□□□□ -0.43
SEC13-214ENST00000476597 BAIAP3O94812 1187 aa12.39□□□□□ -0.43
SEC13-214ENST00000476597 CPA1P15085 419 aa12.39□□□□□ -0.43
SEC13-214ENST00000476597 CDC27P30260 824 aa12.39□□□□□ -0.43
SEC13-214ENST00000476597 HOXC8P31273 242 aa12.39□□□□□ -0.43
SEC13-214ENST00000476597 ZNF618Q5T7W0 954 aa12.39□□□□□ -0.43
SEC13-214ENST00000476597 TYW1BQ6NUM6 668 aa12.39□□□□□ -0.43
SEC13-214ENST00000476597 Q6ZUG5 572 aa12.39□□□□□ -0.43
SEC13-214ENST00000476597 SERINC5Q86VE9 423 aa12.39□□□□□ -0.43
SEC13-214ENST00000476597 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.39□□□□□ -0.43
SEC13-214ENST00000476597 FBXL16Q8N461 479 aa12.39□□□□□ -0.43
SEC13-214ENST00000476597 WNT8BQ93098 351 aa12.39□□□□□ -0.43
SEC13-214ENST00000476597 CDHR1Q96JP9 859 aa12.39□□□□□ -0.43
SEC13-214ENST00000476597 SLC9A7Q96T83 725 aa12.39□□□□□ -0.43
SEC13-214ENST00000476597 RNPEPQ9H4A4 650 aa12.39□□□□□ -0.43
SEC13-214ENST00000476597 PRDM12Q9H4Q4 367 aa12.39□□□□□ -0.43
SEC13-214ENST00000476597 RIC8AQ9NPQ8 531 aa12.39□□□□□ -0.43
SEC13-214ENST00000476597 GOLGA8AA7E2F4 631 aa12.38□□□□□ -0.43
SEC13-214ENST00000476597 GOLGA8BA8MQT2 603 aa12.38□□□□□ -0.43
SEC13-214ENST00000476597 SMIM10L2AP0DMW4 78 aa12.38□□□□□ -0.43
SEC13-214ENST00000476597 SMIM10L2BP0DMW5 78 aa12.38□□□□□ -0.43
SEC13-214ENST00000476597 MYOGP15173 224 aa12.38□□□□□ -0.43
SEC13-214ENST00000476597 KCNA2P16389 499 aa12.38□□□□□ -0.43
SEC13-214ENST00000476597 ADD1P35611 737 aaKnown RBP12.38□□□□□ -0.43
SEC13-214ENST00000476597 NAPAP54920 295 aa12.38□□□□□ -0.43
SEC13-214ENST00000476597 PPP1R18Q6NYC8 613 aa12.38□□□□□ -0.43
SEC13-214ENST00000476597 ATP6V0A1Q93050 837 aa12.38□□□□□ -0.43
SEC13-214ENST00000476597 JAKMIP1Q96N16 626 aaKnown RBP12.38□□□□□ -0.43
SEC13-214ENST00000476597 JADE2Q9NQC1 790 aa12.38□□□□□ -0.43
SEC13-214ENST00000476597 BARHL2Q9NY43 387 aa12.38□□□□□ -0.43
SEC13-214ENST00000476597 TRANK1O15050 2925 aa12.38□□□□□ -0.43
SEC13-214ENST00000476597 GSTTP1A0A1W2PQM5 241 aa12.37□□□□□ -0.43
SEC13-214ENST00000476597 SMCO2A6NFE2 343 aa12.37□□□□□ -0.43
SEC13-214ENST00000476597 hCG_1984214I3L0E3 225 aa12.37□□□□□ -0.43
SEC13-214ENST00000476597 TREHO43280 583 aa12.37□□□□□ -0.43
SEC13-214ENST00000476597 FOSP01100 380 aaPredicted RBP12.37□□□□□ -0.43
SEC13-214ENST00000476597 ADAM17P78536 824 aa12.37□□□□□ -0.43
SEC13-214ENST00000476597 FGD1P98174 961 aa12.37□□□□□ -0.43
SEC13-214ENST00000476597 APOBRQ0VD83 1088 aa12.37□□□□□ -0.43
SEC13-214ENST00000476597 ADGRE1Q14246 886 aa12.37□□□□□ -0.43
SEC13-214ENST00000476597 MBTPS1Q14703 1052 aa12.37□□□□□ -0.43
SEC13-214ENST00000476597 UTP14CQ5TAP6 766 aaKnown RBP12.37□□□□□ -0.43
SEC13-214ENST00000476597 CNKSR3Q6P9H4 555 aa12.37□□□□□ -0.43
SEC13-214ENST00000476597 BLOC1S2Q6QNY1 142 aa12.37□□□□□ -0.43
SEC13-214ENST00000476597 HERC6Q8IVU3 1022 aa12.37□□□□□ -0.43
SEC13-214ENST00000476597 ZNF713Q8N859 430 aaPredicted RBP12.37□□□□□ -0.43
SEC13-214ENST00000476597 SEPT1Q8WYJ6 367 aa12.37□□□□□ -0.43
SEC13-214ENST00000476597 BRF1Q92994 677 aa12.37□□□□□ -0.43
SEC13-214ENST00000476597 GAS2L1Q99501 681 aaPredicted RBP12.37□□□□□ -0.43
SEC13-214ENST00000476597 MXRA8Q9BRK3 442 aa12.37□□□□□ -0.43
SEC13-214ENST00000476597 AGXT2Q9BYV1 514 aa12.37□□□□□ -0.43
SEC13-214ENST00000476597 GLT8D2Q9H1C3 349 aa12.37□□□□□ -0.43
SEC13-214ENST00000476597 EHMT1Q9H9B1 1298 aa12.37□□□□□ -0.43
SEC13-214ENST00000476597 SETD4Q9NVD3 440 aa12.37□□□□□ -0.43
SEC13-214ENST00000476597 MYH6P13533 1939 aa12.37□□□□□ -0.43
SEC13-214ENST00000476597 KIAA1217Q5T5P2 1943 aa12.37□□□□□ -0.43
SEC13-214ENST00000476597 CCDC196A0A1B0GTZ2 297 aa12.36□□□□□ -0.43
SEC13-214ENST00000476597 RSPH10B2B2RC85 870 aa12.36□□□□□ -0.43
SEC13-214ENST00000476597 KIF28PB7ZC32 967 aa12.36□□□□□ -0.43
SEC13-214ENST00000476597 STXBP3O00186 592 aa12.36□□□□□ -0.43
SEC13-214ENST00000476597 EPB41L2O43491 1005 aaKnown RBP12.36□□□□□ -0.43
SEC13-214ENST00000476597 REC8O95072 547 aa12.36□□□□□ -0.43
SEC13-214ENST00000476597 RSPH10BP0C881 870 aa12.36□□□□□ -0.43
SEC13-214ENST00000476597 GNAT1P11488 350 aa12.36□□□□□ -0.43
SEC13-214ENST00000476597 RPS6KB1P23443 525 aa12.36□□□□□ -0.43
SEC13-214ENST00000476597 PSMA5P28066 241 aa12.36□□□□□ -0.43
SEC13-214ENST00000476597 TCF7P36402 384 aaPredicted RBP12.36□□□□□ -0.43
SEC13-214ENST00000476597 THPOP40225 353 aa12.36□□□□□ -0.43
SEC13-214ENST00000476597 METAP2P50579 478 aaKnown RBP eCLIP12.36□□□□□ -0.435e-9■■■□□ 14.6
SEC13-214ENST00000476597 WDR5P61964 334 aaKnown RBP12.36□□□□□ -0.43
SEC13-214ENST00000476597 SP4Q02446 784 aa12.36□□□□□ -0.43
SEC13-214ENST00000476597 MTMR1Q13613 665 aa12.36□□□□□ -0.43
SEC13-214ENST00000476597 TCTN1Q2MV58 587 aa12.36□□□□□ -0.43
SEC13-214ENST00000476597 PPP2R2DQ66LE6 453 aa12.36□□□□□ -0.43
SEC13-214ENST00000476597 TRIM50Q86XT4 487 aa12.36□□□□□ -0.43
SEC13-214ENST00000476597 CYP2W1Q8TAV3 490 aa12.36□□□□□ -0.43
SEC13-214ENST00000476597 KCNH7Q9NS40 1196 aa12.36□□□□□ -0.43
SEC13-214ENST00000476597 ZNF215Q9UL58 517 aaPredicted RBP12.36□□□□□ -0.43
SEC13-214ENST00000476597 NAP1L2Q9ULW6 460 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms