RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 LRRC55Q6ZSA7 311 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 B4GALNT4Q76KP1 1039 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 MAEAQ7L5Y9 396 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 KCNK18Q7Z418 384 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 CCDC24Q8N4L8 307 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 MS4A14Q96JA4 679 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 CNOT6LQ96LI5 555 aaKnown RBP9.24□□□□□ -0.93
VAPB-205ENST00000476395 MTMR9Q96QG7 549 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 FGFBP2Q9BYJ0 223 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 TMX4Q9H1E5 349 aaPredicted RBP9.24□□□□□ -0.93
VAPB-205ENST00000476395 SUDS3Q9H7L9 328 aaPredicted RBP9.24□□□□□ -0.93
VAPB-205ENST00000476395 MLXIPQ9HAP2 919 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 LRRC4CQ9HCJ2 640 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 TCP11L1Q9NUJ3 509 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 RBBP6Q7Z6E9 1792 aaKnown RBP9.24□□□□□ -0.93
VAPB-205ENST00000476395 CARSP49589 748 aaKnown RBP9.24□□□□□ -0.93
VAPB-205ENST00000476395 MRPL12P52815 198 aaKnown RBP9.24□□□□□ -0.93
VAPB-205ENST00000476395 CENPPQ6IPU0 288 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 CLEC4GQ6UXB4 293 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 CCDC155Q8N6L0 562 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 P2RX5Q93086 422 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 TMEM47Q9BQJ4 181 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 EPN3Q9H201 632 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 EXOC1Q9NV70 894 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 RMND1Q9NWS8 449 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 LUC7L2Q9Y383 392 aaKnown RBP9.24□□□□□ -0.93
VAPB-205ENST00000476395 QSER1Q2KHR3 1735 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 SPATA31A6Q5VVP1 1343 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 PEX14O75381 377 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 NOL4O94818 638 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 ZBTB48P10074 688 aaPredicted RBP9.23□□□□□ -0.93
VAPB-205ENST00000476395 GBP2P32456 591 aaPredicted RBP9.23□□□□□ -0.93
VAPB-205ENST00000476395 RNASE9P60153 205 aaKnown RBP9.23□□□□□ -0.93
VAPB-205ENST00000476395 SKOR1P84550 965 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 KCNMA1Q12791 1236 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 MYO1EQ12965 1108 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 NME8Q8N427 588 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 ITFG2Q969R8 447 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 NLRP3Q96P20 1036 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 LRWD1Q9UFC0 647 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 NFU1Q9UMS0 254 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 TLR2O60603 784 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 PPP1R37O75864 691 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 KIF4AO95239 1232 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 CCNE1P24864 410 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 DNM2P50570 870 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 SETDB1Q15047 1291 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 ANKRD13CQ8N6S4 541 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 IFT81Q8WYA0 676 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 DHTKD1Q96HY7 919 aaPredicted RBP9.23□□□□□ -0.93
VAPB-205ENST00000476395 RUFY1Q96T51 708 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 SH2D4AQ9H788 454 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 PLAGL2Q9UPG8 496 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 MYMKA6NI61 221 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 GOLGA8KD6RF30 607 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 SLC37A4O43826 429 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 CDR1P51861 262 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 ZBED6P86452 979 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 GRIK3Q13003 919 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 CRYMQ14894 314 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 DIXDC1Q155Q3 683 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 THEMIS2Q5TEJ8 643 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 DTHD1Q6ZMT9 781 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 KIAA1328Q86T90 577 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 CYFIP2Q96F07 1278 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 SNX12Q9UMY4 172 aa9.23□□□□□ -0.93
VAPB-205ENST00000476395 MYH4Q9Y623 1939 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 LRRC37AA6NMS7 1700 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 TSPY2A6NKD2 308 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 MYL1P05976 194 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 GLI1P08151 1106 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 NR1D1P20393 614 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 RBM5P52756 815 aaKnown RBP eCLIP9.22□□□□□ -0.93
VAPB-205ENST00000476395 ZCWPW2Q504Y3 356 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 HAUS3Q68CZ6 603 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 BARGINQ6ZT62 677 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 RASSF8Q8NHQ8 419 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 BORCS6Q96GS4 357 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 RTFDC1Q9BY42 306 aaPredicted RBP9.22□□□□□ -0.93
VAPB-205ENST00000476395 TMEM260Q9NX78 707 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 MCM9Q9NXL9 1143 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 SRP68Q9UHB9 627 aaKnown RBP9.22□□□□□ -0.93
VAPB-205ENST00000476395 BAIAP2L1Q9UHR4 511 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 DCDC2CA8MYV0 355 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 VAV2P52735 878 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 TUBB4BP68371 445 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 BYSLQ13895 437 aaKnown RBP9.22□□□□□ -0.93
VAPB-205ENST00000476395 FAM98CQ17RN3 349 aaKnown RBP9.22□□□□□ -0.93
VAPB-205ENST00000476395 CAVIN4Q5BKX8 364 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 MEX3CQ5U5Q3 659 aaKnown RBP9.22□□□□□ -0.93
VAPB-205ENST00000476395 C6orf89Q6UWU4 347 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 MMGT1Q8N4V1 131 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 CSGALNACT2Q8N6G5 542 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 SPATA4Q8NEY3 305 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 NSMCE1Q8WV22 266 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 MTMR8Q96EF0 704 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 ZCWPW1Q9H0M4 648 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 RBM12Q9NTZ6 932 aaKnown RBP9.22□□□□□ -0.93
VAPB-205ENST00000476395 ANO9A1A5B4 782 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 HSF2BPO75031 334 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms