RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 ALADP13716 330 aa23.75■■□□□ 1.39
VPS36-203ENST00000475375 FCHSD1Q86WN1 690 aa23.75■■□□□ 1.39
VPS36-203ENST00000475375 HOMER1Q86YM7 354 aa23.75■■□□□ 1.39
VPS36-203ENST00000475375 BANK1Q8NDB2 785 aa23.75■■□□□ 1.39
VPS36-203ENST00000475375 TUT1Q9H6E5 874 aaKnown RBP23.75■■□□□ 1.39
VPS36-203ENST00000475375 CNNM2Q9H8M5 875 aa23.75■■□□□ 1.39
VPS36-203ENST00000475375 TREHO43280 583 aa23.74■■□□□ 1.39
VPS36-203ENST00000475375 PPP1R11O60927 126 aaPredicted RBP23.74■■□□□ 1.39
VPS36-203ENST00000475375 GHRHRQ02643 423 aa23.74■■□□□ 1.39
VPS36-203ENST00000475375 MKRN4PQ13434 485 aaPredicted RBP23.74■■□□□ 1.39
VPS36-203ENST00000475375 B4GALNT3Q6L9W6 998 aa23.74■■□□□ 1.39
VPS36-203ENST00000475375 TMEM192Q8IY95 271 aa23.74■■□□□ 1.39
VPS36-203ENST00000475375 GPKOWQ92917 476 aaPredicted RBP eCLIP23.74■■□□□ 1.39
VPS36-203ENST00000475375 LAMA4Q16363 1823 aa23.74■■□□□ 1.39
VPS36-203ENST00000475375 PIEZO1Q92508 2521 aa23.74■■□□□ 1.39
VPS36-203ENST00000475375 MICAL3Q7RTP6 2002 aa23.73■■□□□ 1.39
VPS36-203ENST00000475375 H3BNC9 293 aa23.73■■□□□ 1.39
VPS36-203ENST00000475375 GCOM1H8Y6P7 765 aaPredicted RBP23.73■■□□□ 1.39
VPS36-203ENST00000475375 LGALS2P05162 132 aa23.73■■□□□ 1.39
VPS36-203ENST00000475375 POLR2MP0CAP2 368 aa23.73■■□□□ 1.39
VPS36-203ENST00000475375 TCEAL5Q5H9L2 206 aa23.73■■□□□ 1.39
VPS36-203ENST00000475375 NEK9Q8TD19 979 aa23.73■■□□□ 1.39
VPS36-203ENST00000475375 IFIH1Q9BYX4 1025 aaKnown RBP23.73■■□□□ 1.39
VPS36-203ENST00000475375 FAM50BQ9Y247 325 aa23.73■■□□□ 1.39
VPS36-203ENST00000475375 SAMD3Q8N6K7 520 aa23.72■■□□□ 1.39
VPS36-203ENST00000475375 TOP1MTQ969P6 601 aa23.72■■□□□ 1.39
VPS36-203ENST00000475375 DSCC1Q9BVC3 393 aa23.72■■□□□ 1.39
VPS36-203ENST00000475375 RNPEPQ9H4A4 650 aa23.72■■□□□ 1.39
VPS36-203ENST00000475375 GNAT1P11488 350 aa23.71■■□□□ 1.39
VPS36-203ENST00000475375 TRAF1Q13077 416 aa23.71■■□□□ 1.39
VPS36-203ENST00000475375 GNPTABQ3T906 1256 aa23.71■■□□□ 1.39
VPS36-203ENST00000475375 ALYREFQ86V81 257 aaKnown RBP23.71■■□□□ 1.39
VPS36-203ENST00000475375 PABPC5Q96DU9 382 aaKnown RBP23.71■■□□□ 1.39
VPS36-203ENST00000475375 MTMR8Q96EF0 704 aa23.71■■□□□ 1.39
VPS36-203ENST00000475375 NSUN3Q9H649 340 aaKnown RBP23.71■■□□□ 1.39
VPS36-203ENST00000475375 BCAS3Q9H6U6 928 aa23.71■■□□□ 1.39
VPS36-203ENST00000475375 SETD4Q9NVD3 440 aa23.71■■□□□ 1.39
VPS36-203ENST00000475375 MAD2L2Q9UI95 211 aa23.71■■□□□ 1.39
VPS36-203ENST00000475375 HIP1O00291 1037 aa23.7■■□□□ 1.38
VPS36-203ENST00000475375 DCXO43602 365 aa23.7■■□□□ 1.38
VPS36-203ENST00000475375 CAND2O75155 1236 aa23.7■■□□□ 1.38
VPS36-203ENST00000475375 USP26Q9BXU7 913 aa23.7■■□□□ 1.38
VPS36-203ENST00000475375 OSBPL7Q9BZF2 842 aa23.7■■□□□ 1.38
VPS36-203ENST00000475375 CLDND1Q9NY35 253 aa23.7■■□□□ 1.38
VPS36-203ENST00000475375 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.69■■□□□ 1.38
VPS36-203ENST00000475375 HOXC8P31273 242 aa23.69■■□□□ 1.38
VPS36-203ENST00000475375 CTNNB1P35222 781 aa23.69■■□□□ 1.38
VPS36-203ENST00000475375 CYFIP1Q7L576 1253 aa23.69■■□□□ 1.38
VPS36-203ENST00000475375 PIGSQ96S52 555 aa23.69■■□□□ 1.38
VPS36-203ENST00000475375 UTP14CQ5TAP6 766 aaKnown RBP23.68■■□□□ 1.38
VPS36-203ENST00000475375 PLEKHM2Q8IWE5 1019 aa23.68■■□□□ 1.38
VPS36-203ENST00000475375 FIBCD1Q8N539 461 aa23.68■■□□□ 1.38
VPS36-203ENST00000475375 APBB2Q92870 758 aa23.68■■□□□ 1.38
VPS36-203ENST00000475375 IL17RAQ96F46 866 aa23.68■■□□□ 1.38
VPS36-203ENST00000475375 ZNF215Q9UL58 517 aaPredicted RBP23.68■■□□□ 1.38
VPS36-203ENST00000475375 PALM3A6NDB9 673 aaPredicted RBP23.67■■□□□ 1.38
VPS36-203ENST00000475375 ARHGAP4P98171 946 aa23.67■■□□□ 1.38
VPS36-203ENST00000475375 SP4Q02446 784 aa23.67■■□□□ 1.38
VPS36-203ENST00000475375 NEDD9Q14511 834 aa23.67■■□□□ 1.38
VPS36-203ENST00000475375 SEC23AQ15436 765 aa23.67■■□□□ 1.38
VPS36-203ENST00000475375 CYB5R4Q7L1T6 521 aa23.67■■□□□ 1.38
VPS36-203ENST00000475375 CHD1LQ86WJ1 897 aa23.67■■□□□ 1.38
VPS36-203ENST00000475375 TRIM50Q86XT4 487 aa23.67■■□□□ 1.38
VPS36-203ENST00000475375 ZP2Q05996 745 aa23.66■■□□□ 1.38
VPS36-203ENST00000475375 METTL7BQ6UX53 244 aa23.66■■□□□ 1.38
VPS36-203ENST00000475375 RPAINQ86UA6 219 aa23.66■■□□□ 1.38
VPS36-203ENST00000475375 GPR20Q99678 358 aa23.66■■□□□ 1.38
VPS36-203ENST00000475375 RWDD1Q9H446 243 aaPredicted RBP23.66■■□□□ 1.38
VPS36-203ENST00000475375 RTEL1Q9NZ71 1219 aa23.66■■□□□ 1.38
VPS36-203ENST00000475375 PRKAG3Q9UGI9 489 aa23.66■■□□□ 1.38
VPS36-203ENST00000475375 CSPG5O95196 566 aa23.65■■□□□ 1.38
VPS36-203ENST00000475375 MRPS9P82933 396 aaKnown RBP23.65■■□□□ 1.38
VPS36-203ENST00000475375 TRDNQ13061 729 aa23.65■■□□□ 1.38
VPS36-203ENST00000475375 CLUL1Q15846 466 aa23.65■■□□□ 1.38
VPS36-203ENST00000475375 PIBF1Q8WXW3 757 aa23.65■■□□□ 1.38
VPS36-203ENST00000475375 C11orf84Q9BUA3 381 aaPredicted RBP23.65■■□□□ 1.38
VPS36-203ENST00000475375 OSBPL3Q9H4L5 887 aa23.65■■□□□ 1.38
VPS36-203ENST00000475375 PNMA6FA0A0J9YX94 578 aa23.64■■□□□ 1.37
VPS36-203ENST00000475375 SPATA31C2B4DYI2 1134 aa23.64■■□□□ 1.37
VPS36-203ENST00000475375 FIBPO43427 364 aa23.64■■□□□ 1.37
VPS36-203ENST00000475375 NCK2O43639 380 aa23.64■■□□□ 1.37
VPS36-203ENST00000475375 STAM2O75886 525 aa23.64■■□□□ 1.37
VPS36-203ENST00000475375 ICAM3P32942 547 aa23.64■■□□□ 1.37
VPS36-203ENST00000475375 GRM4Q14833 912 aa23.64■■□□□ 1.37
VPS36-203ENST00000475375 SLC35G1Q2M3R5 365 aa23.64■■□□□ 1.37
VPS36-203ENST00000475375 ADHFE1Q8IWW8 467 aa23.64■■□□□ 1.37
VPS36-203ENST00000475375 LMBR1Q8WVP7 490 aa23.64■■□□□ 1.37
VPS36-203ENST00000475375 INPP4AQ96PE3 977 aaPredicted RBP23.64■■□□□ 1.37
VPS36-203ENST00000475375 RIOX1Q9H6W3 641 aa23.64■■□□□ 1.37
VPS36-203ENST00000475375 ERICH2A1L162 156 aa23.63■■□□□ 1.37
VPS36-203ENST00000475375 IFIT3O14879 490 aaKnown RBP23.63■■□□□ 1.37
VPS36-203ENST00000475375 GHRP10912 638 aa23.63■■□□□ 1.37
VPS36-203ENST00000475375 COL19A1Q14993 1142 aa23.63■■□□□ 1.37
VPS36-203ENST00000475375 FAM26DQ5JW98 314 aa23.63■■□□□ 1.37
VPS36-203ENST00000475375 SMC5Q8IY18 1101 aa23.63■■□□□ 1.37
VPS36-203ENST00000475375 UPF3BQ9BZI7 483 aaKnown RBP23.63■■□□□ 1.37
VPS36-203ENST00000475375 COL4A6Q14031 1691 aa23.63■■□□□ 1.37
VPS36-203ENST00000475375 MYO7AQ13402 2215 aa23.63■■□□□ 1.37
VPS36-203ENST00000475375 NLRC5Q86WI3 1866 aa23.62■■□□□ 1.37
VPS36-203ENST00000475375 POTEB3A0JP26 581 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms