RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 SCLYQ96I15 445 aa18.29■□□□□ 0.52
ITGB1-210ENST00000474568 AIFM3Q96NN9 605 aa18.29■□□□□ 0.52
ITGB1-210ENST00000474568 UIMC1Q96RL1 719 aa18.29■□□□□ 0.52
ITGB1-210ENST00000474568 GPR20Q99678 358 aa18.29■□□□□ 0.52
ITGB1-210ENST00000474568 MXRA8Q9BRK3 442 aa18.29■□□□□ 0.52
ITGB1-210ENST00000474568 KATNAL1Q9BW62 490 aa18.29■□□□□ 0.52
ITGB1-210ENST00000474568 ZMYND12Q9H0C1 365 aa18.29■□□□□ 0.52
ITGB1-210ENST00000474568 ESYT2A0FGR8 921 aa18.28■□□□□ 0.52
ITGB1-210ENST00000474568 LGALS2P05162 132 aa18.28■□□□□ 0.52
ITGB1-210ENST00000474568 HOXD8P13378 290 aaPredicted RBP18.28■□□□□ 0.52
ITGB1-210ENST00000474568 KCNA2P16389 499 aa18.28■□□□□ 0.52
ITGB1-210ENST00000474568 ZNF76P36508 570 aa18.28■□□□□ 0.52
ITGB1-210ENST00000474568 NEK4P51957 841 aa18.28■□□□□ 0.52
ITGB1-210ENST00000474568 NLRP5P59047 1200 aa18.28■□□□□ 0.52
ITGB1-210ENST00000474568 ARHGAP4P98171 946 aa18.28■□□□□ 0.52
ITGB1-210ENST00000474568 PPIGQ13427 754 aaKnown RBP eCLIP18.28■□□□□ 0.52
ITGB1-210ENST00000474568 PTGISQ16647 500 aa18.28■□□□□ 0.52
ITGB1-210ENST00000474568 LRIT3Q3SXY7 679 aa18.28■□□□□ 0.52
ITGB1-210ENST00000474568 TRIM50Q86XT4 487 aa18.28■□□□□ 0.52
ITGB1-210ENST00000474568 REXO1Q8N1G1 1221 aaKnown RBP18.28■□□□□ 0.52
ITGB1-210ENST00000474568 NECAB1Q8N987 351 aa18.28■□□□□ 0.52
ITGB1-210ENST00000474568 CCDC148Q8NFR7 591 aa18.28■□□□□ 0.52
ITGB1-210ENST00000474568 CDHR1Q96JP9 859 aa18.28■□□□□ 0.52
ITGB1-210ENST00000474568 WNT8AQ9H1J5 351 aa18.28■□□□□ 0.52
ITGB1-210ENST00000474568 RBAK-RBAKDNI3L0D1 243 aa18.27■□□□□ 0.52
ITGB1-210ENST00000474568 HAS3O00219 553 aa18.27■□□□□ 0.52
ITGB1-210ENST00000474568 SLC34A2O95436 690 aa18.27■□□□□ 0.52
ITGB1-210ENST00000474568 LARGE1O95461 756 aa18.27■□□□□ 0.52
ITGB1-210ENST00000474568 ARP10275 920 aa18.27■□□□□ 0.52
ITGB1-210ENST00000474568 GNA11P29992 359 aa18.27■□□□□ 0.52
ITGB1-210ENST00000474568 SREBF1P36956 1147 aa18.27■□□□□ 0.52
ITGB1-210ENST00000474568 ZNF200P98182 395 aaPredicted RBP18.27■□□□□ 0.52
ITGB1-210ENST00000474568 PTPN11Q06124 597 aaPredicted RBP18.27■□□□□ 0.52
ITGB1-210ENST00000474568 ANKRD1Q15327 319 aa18.27■□□□□ 0.52
ITGB1-210ENST00000474568 RNPC3Q96LT9 517 aaKnown RBP18.27■□□□□ 0.52
ITGB1-210ENST00000474568 SENP7Q9BQF6 1050 aa18.27■□□□□ 0.52
ITGB1-210ENST00000474568 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.27■□□□□ 0.52
ITGB1-210ENST00000474568 C16orf70Q9BSU1 422 aa18.27■□□□□ 0.52
ITGB1-210ENST00000474568 GTF2IRD1Q9UHL9 959 aa18.27■□□□□ 0.52
ITGB1-210ENST00000474568 SCN10AQ9Y5Y9 1956 aa18.26■□□□□ 0.51
ITGB1-210ENST00000474568 PFKFB2O60825 505 aa18.26■□□□□ 0.51
ITGB1-210ENST00000474568 DEXIO95424 95 aa18.26■□□□□ 0.51
ITGB1-210ENST00000474568 CEP55Q53EZ4 464 aa18.26■□□□□ 0.51
ITGB1-210ENST00000474568 C16orf59Q7L2K0 433 aa18.26■□□□□ 0.51
ITGB1-210ENST00000474568 KCNH7Q9NS40 1196 aa18.26■□□□□ 0.51
ITGB1-210ENST00000474568 LAMA3Q16787 3333 aa18.26■□□□□ 0.51
ITGB1-210ENST00000474568 H3BRB1 525 aa18.25■□□□□ 0.51
ITGB1-210ENST00000474568 HIC1Q14526 733 aa18.25■□□□□ 0.51
ITGB1-210ENST00000474568 ME3Q16798 604 aa18.25■□□□□ 0.51
ITGB1-210ENST00000474568 TMEM240Q5SV17 173 aa18.25■□□□□ 0.51
ITGB1-210ENST00000474568 ZNF365Q70YC5 407 aa18.25■□□□□ 0.51
ITGB1-210ENST00000474568 SESTD1Q86VW0 696 aa18.25■□□□□ 0.51
ITGB1-210ENST00000474568 GIMAP8Q8ND71 665 aaPredicted RBP18.25■□□□□ 0.51
ITGB1-210ENST00000474568 IL17RAQ96F46 866 aa18.25■□□□□ 0.51
ITGB1-210ENST00000474568 CTAGE1Q96RT6 745 aa18.25■□□□□ 0.51
ITGB1-210ENST00000474568 TUT1Q9H6E5 874 aaKnown RBP18.25■□□□□ 0.51
ITGB1-210ENST00000474568 DDX39AO00148 427 aaKnown RBP18.24■□□□□ 0.51
ITGB1-210ENST00000474568 CDKL5O76039 1030 aa18.24■□□□□ 0.51
ITGB1-210ENST00000474568 TCF7P36402 384 aaPredicted RBP18.24■□□□□ 0.51
ITGB1-210ENST00000474568 DEFB128Q7Z7B8 93 aa18.24■□□□□ 0.51
ITGB1-210ENST00000474568 PLA2G4DQ86XP0 818 aa18.24■□□□□ 0.51
ITGB1-210ENST00000474568 TEX2Q8IWB9 1127 aa18.24■□□□□ 0.51
ITGB1-210ENST00000474568 RETREG2Q8NC44 543 aa18.24■□□□□ 0.51
ITGB1-210ENST00000474568 BICD2Q8TD16 824 aa18.24■□□□□ 0.51
ITGB1-210ENST00000474568 DHX38Q92620 1227 aaKnown RBP18.24■□□□□ 0.51
ITGB1-210ENST00000474568 AGO4Q9HCK5 861 aaKnown RBP18.24■□□□□ 0.51
ITGB1-210ENST00000474568 IL23AQ9NPF7 189 aa18.24■□□□□ 0.51
ITGB1-210ENST00000474568 KCNJ14Q9UNX9 436 aa18.24■□□□□ 0.51
ITGB1-210ENST00000474568 GSTTP1A0A1W2PQM5 241 aa18.23■□□□□ 0.51
ITGB1-210ENST00000474568 FAM86B1E9PN63 330 aa18.23■□□□□ 0.51
ITGB1-210ENST00000474568 MEIS1O00470 390 aa18.23■□□□□ 0.51
ITGB1-210ENST00000474568 CTDNEP1O95476 244 aa18.23■□□□□ 0.51
ITGB1-210ENST00000474568 FAM86B2P0C5J1 330 aa18.23■□□□□ 0.51
ITGB1-210ENST00000474568 SMIM10L2AP0DMW4 78 aa18.23■□□□□ 0.51
ITGB1-210ENST00000474568 SMIM10L2BP0DMW5 78 aa18.23■□□□□ 0.51
ITGB1-210ENST00000474568 MARK3P27448 753 aa18.23■□□□□ 0.51
ITGB1-210ENST00000474568 ITGB3BPQ13352 177 aaPredicted RBP18.23■□□□□ 0.51
ITGB1-210ENST00000474568 Q7L0L9 218 aa18.23■□□□□ 0.51
ITGB1-210ENST00000474568 SEPT1Q8WYJ6 367 aa18.23■□□□□ 0.51
ITGB1-210ENST00000474568 SDF4Q9BRK5 362 aa18.23■□□□□ 0.51
ITGB1-210ENST00000474568 JPH1Q9HDC5 661 aaPredicted RBP18.23■□□□□ 0.51
ITGB1-210ENST00000474568 SH3GLB2Q9NR46 395 aa18.23■□□□□ 0.51
ITGB1-210ENST00000474568 GJB4Q9NTQ9 266 aa18.23■□□□□ 0.51
ITGB1-210ENST00000474568 MYH7BA7E2Y1 1941 aa18.22■□□□□ 0.51
ITGB1-210ENST00000474568 C17orf102A2RUQ5 167 aa18.22■□□□□ 0.51
ITGB1-210ENST00000474568 MAFGO15525 162 aa18.22■□□□□ 0.51
ITGB1-210ENST00000474568 BFSP2Q13515 415 aa18.22■□□□□ 0.51
ITGB1-210ENST00000474568 PSRC1Q6PGN9 363 aaPredicted RBP18.22■□□□□ 0.51
ITGB1-210ENST00000474568 OTOP2Q7RTS6 562 aa18.22■□□□□ 0.51
ITGB1-210ENST00000474568 WNT8BQ93098 351 aa18.22■□□□□ 0.51
ITGB1-210ENST00000474568 SETD4Q9NVD3 440 aa18.22■□□□□ 0.51
ITGB1-210ENST00000474568 ORC3Q9UBD5 711 aaPredicted RBP18.22■□□□□ 0.51
ITGB1-210ENST00000474568 SLC9A2Q9UBY0 812 aa18.22■□□□□ 0.51
ITGB1-210ENST00000474568 ZNF215Q9UL58 517 aaPredicted RBP18.22■□□□□ 0.51
ITGB1-210ENST00000474568 PCDHA4Q9UN74 947 aa18.22■□□□□ 0.51
ITGB1-210ENST00000474568 FGBP02675 491 aa18.21■□□□□ 0.51
ITGB1-210ENST00000474568 CYP3A4P08684 503 aa18.21■□□□□ 0.51
ITGB1-210ENST00000474568 FOSBP53539 338 aa18.21■□□□□ 0.51
ITGB1-210ENST00000474568 PRR16Q569H4 304 aa18.21■□□□□ 0.51
ITGB1-210ENST00000474568 MCTP2Q6DN12 878 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms