RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 SPATA31C2B4DYI2 1134 aa9.39□□□□□ -0.91
CNN3-205ENST00000474409 ADCY3O60266 1144 aa9.39□□□□□ -0.91
CNN3-205ENST00000474409 SORBS3O60504 671 aa9.39□□□□□ -0.91
CNN3-205ENST00000474409 SNAI1O95863 264 aaPredicted RBP9.39□□□□□ -0.91
CNN3-205ENST00000474409 HMGCRP04035 888 aa9.39□□□□□ -0.91
CNN3-205ENST00000474409 HSPA1AP0DMV8 641 aaKnown RBP9.39□□□□□ -0.91
CNN3-205ENST00000474409 HSPA1BP0DMV9 641 aaKnown RBP9.39□□□□□ -0.91
CNN3-205ENST00000474409 TXNP10599 105 aaKnown RBP9.39□□□□□ -0.91
CNN3-205ENST00000474409 ELNP15502 786 aa9.39□□□□□ -0.91
CNN3-205ENST00000474409 KCNA2P16389 499 aa9.39□□□□□ -0.91
CNN3-205ENST00000474409 CYP2C19P33261 490 aa9.39□□□□□ -0.91
CNN3-205ENST00000474409 KRT76Q01546 638 aa9.39□□□□□ -0.91
CNN3-205ENST00000474409 SP4Q02446 784 aa9.39□□□□□ -0.91
CNN3-205ENST00000474409 SEMA3FQ13275 785 aa9.39□□□□□ -0.91
CNN3-205ENST00000474409 ITGB3BPQ13352 177 aaPredicted RBP9.39□□□□□ -0.91
CNN3-205ENST00000474409 ACVR2BQ13705 512 aa9.39□□□□□ -0.91
CNN3-205ENST00000474409 NEDD9Q14511 834 aa9.39□□□□□ -0.91
CNN3-205ENST00000474409 HAUS3Q68CZ6 603 aa9.39□□□□□ -0.91
CNN3-205ENST00000474409 ADALQ6DHV7 355 aa9.39□□□□□ -0.91
CNN3-205ENST00000474409 CCDC73Q6ZRK6 1079 aa9.39□□□□□ -0.91
CNN3-205ENST00000474409 OTOP1Q7RTM1 612 aa9.39□□□□□ -0.91
CNN3-205ENST00000474409 GIMAP8Q8ND71 665 aaPredicted RBP9.39□□□□□ -0.91
CNN3-205ENST00000474409 SLAIN1Q8ND83 568 aa9.39□□□□□ -0.91
CNN3-205ENST00000474409 AK8Q96MA6 479 aa9.39□□□□□ -0.91
CNN3-205ENST00000474409 RIT2Q99578 217 aa9.39□□□□□ -0.91
CNN3-205ENST00000474409 TBC1D22BQ9NU19 505 aa9.39□□□□□ -0.91
CNN3-205ENST00000474409 LRWD1Q9UFC0 647 aa9.39□□□□□ -0.91
CNN3-205ENST00000474409 VAV3Q9UKW4 847 aa9.39□□□□□ -0.91
CNN3-205ENST00000474409 SAMM50Q9Y512 469 aa9.39□□□□□ -0.91
CNN3-205ENST00000474409 KDM3AQ9Y4C1 1321 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 A0A1W2PQ27 194 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 A0A1W2PQ64 194 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 A0A1W2PQD8 194 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 PP2D1A8MPX8 630 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 WDR64B1ANS9 1081 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 FOXN1O15353 648 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 GADD45BO75293 160 aaPredicted RBP9.38□□□□□ -0.91
CNN3-205ENST00000474409 PSMD10O75832 226 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 ARIH2O95376 493 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 GGPS1O95749 300 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 TGFB3P10600 412 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 HSPA8P11142 646 aaKnown RBP9.38□□□□□ -0.91
CNN3-205ENST00000474409 UBA7P41226 1012 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 ADCYAP1R1P41586 468 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 JAK3P52333 1124 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 PPP2R5CQ13362 524 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 NFKBIBQ15653 356 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 ZRSR1Q15695 479 aaKnown RBP9.38□□□□□ -0.91
CNN3-205ENST00000474409 IL17AQ16552 155 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 LY6KQ17RY6 165 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 SPECC1Q5M775 1068 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 AXDND1Q5T1B0 1012 aaPredicted RBP9.38□□□□□ -0.91
CNN3-205ENST00000474409 RESP18Q5W5W9 173 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 KRT79Q5XKE5 535 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 SHC4Q6S5L8 630 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 MIER3Q7Z3K6 550 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 IGSF22Q8N9C0 903 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 FSIP1Q8NA03 581 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 ZNF579Q8NAF0 562 aaKnown RBP9.38□□□□□ -0.91
CNN3-205ENST00000474409 SNX29Q8TEQ0 813 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 SYMPKQ92797 1274 aaKnown RBP9.38□□□□□ -0.91
CNN3-205ENST00000474409 CDK5RAP3Q96JB5 506 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 KATNBL1Q9H079 304 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 UNC45AQ9H3U1 944 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 PDGFCQ9NRA1 345 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 LMBRD1Q9NUN5 540 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 SLC9A2Q9UBY0 812 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 PTCH2Q9Y6C5 1203 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 STK24Q9Y6E0 443 aa9.38□□□□□ -0.91
CNN3-205ENST00000474409 CEP350Q5VT06 3117 aa9.37□□□□□ -0.91
CNN3-205ENST00000474409 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.37□□□□□ -0.91
CNN3-205ENST00000474409 RBM47A0AV96 593 aaKnown RBP9.37□□□□□ -0.91
CNN3-205ENST00000474409 NOP56O00567 594 aaKnown RBP9.37□□□□□ -0.91
CNN3-205ENST00000474409 NKRFO15226 690 aaKnown RBP eCLIP9.37□□□□□ -0.91
CNN3-205ENST00000474409 ATP9AO75110 1047 aa9.37□□□□□ -0.91
CNN3-205ENST00000474409 FARP2O94887 1054 aaPredicted RBP9.37□□□□□ -0.91
CNN3-205ENST00000474409 MBD3O95983 291 aa9.37□□□□□ -0.91
CNN3-205ENST00000474409 GH1P01241 217 aa9.37□□□□□ -0.91
CNN3-205ENST00000474409 PRKAR2AP13861 404 aaKnown RBP9.37□□□□□ -0.91
CNN3-205ENST00000474409 AKR1A1P14550 325 aa9.37□□□□□ -0.91
CNN3-205ENST00000474409 PFKFB1P16118 471 aa9.37□□□□□ -0.91
CNN3-205ENST00000474409 CNGA1P29973 690 aa9.37□□□□□ -0.91
CNN3-205ENST00000474409 SFNP31947 248 aa9.37□□□□□ -0.91
CNN3-205ENST00000474409 CCT6AP40227 531 aaKnown RBP9.37□□□□□ -0.91
CNN3-205ENST00000474409 CTCFP49711 727 aaPredicted RBP9.37□□□□□ -0.91
CNN3-205ENST00000474409 SPIRE1Q08AE8 756 aa9.37□□□□□ -0.91
CNN3-205ENST00000474409 CCDC144BQ3MJ40 725 aa9.37□□□□□ -0.91
CNN3-205ENST00000474409 PRAMEF19Q5SWL8 479 aa9.37□□□□□ -0.91
CNN3-205ENST00000474409 ZNF746Q6NUN9 644 aaPredicted RBP9.37□□□□□ -0.91
CNN3-205ENST00000474409 TAPT1Q6NXT6 567 aa9.37□□□□□ -0.91
CNN3-205ENST00000474409 CYFIP1Q7L576 1253 aa9.37□□□□□ -0.91
CNN3-205ENST00000474409 CABP7Q86V35 215 aa9.37□□□□□ -0.91
CNN3-205ENST00000474409 DHX37Q8IY37 1157 aaKnown RBP9.37□□□□□ -0.91
CNN3-205ENST00000474409 SMAP1Q8IYB5 467 aaPredicted RBP9.37□□□□□ -0.91
CNN3-205ENST00000474409 PXYLP1Q8TE99 480 aa9.37□□□□□ -0.91
CNN3-205ENST00000474409 CALML4Q96GE6 196 aa9.37□□□□□ -0.91
CNN3-205ENST00000474409 EPSTI1Q96J88 318 aa9.37□□□□□ -0.91
CNN3-205ENST00000474409 SENP7Q9BQF6 1050 aa9.37□□□□□ -0.91
CNN3-205ENST00000474409 MLXIPQ9HAP2 919 aa9.37□□□□□ -0.91
CNN3-205ENST00000474409 CCDC39Q9UFE4 941 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms