RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 HDAC6Q9UBN7 1215 aa21.3■■□□□ 1
CCDC171-206ENST00000474193 GTF2IRD1Q9UHL9 959 aa21.3■■□□□ 1
CCDC171-206ENST00000474193 TMEM265A0A087WTH1 108 aa21.29■■□□□ 1
CCDC171-206ENST00000474193 H3BRB1 525 aa21.29■■□□□ 1
CCDC171-206ENST00000474193 ST18O60284 1047 aa21.29■■□□□ 1
CCDC171-206ENST00000474193 PARNO95453 639 aaKnown RBP21.29■■□□□ 1
CCDC171-206ENST00000474193 GDF6Q6KF10 455 aaPredicted RBP21.29■■□□□ 1
CCDC171-206ENST00000474193 OTOP2Q7RTS6 562 aa21.29■■□□□ 1
CCDC171-206ENST00000474193 FAM161BQ96MY7 647 aa21.29■■□□□ 1
CCDC171-206ENST00000474193 FTOQ9C0B1 505 aaKnown RBP eCLIP21.29■■□□□ 1
CCDC171-206ENST00000474193 TUT1Q9H6E5 874 aaKnown RBP21.29■■□□□ 1
CCDC171-206ENST00000474193 ZNF215Q9UL58 517 aaPredicted RBP21.29■■□□□ 1
CCDC171-206ENST00000474193 ZBBXA8MT70 800 aa21.28■■□□□ 1
CCDC171-206ENST00000474193 HAS3O00219 553 aa21.28■■□□□ 1
CCDC171-206ENST00000474193 IQCF3P0C7M6 154 aa21.28■■□□□ 1
CCDC171-206ENST00000474193 GNAT1P11488 350 aa21.28■■□□□ 1
CCDC171-206ENST00000474193 SCG2P13521 617 aa21.28■■□□□ 1
CCDC171-206ENST00000474193 ZNF76P36508 570 aa21.28■■□□□ 1
CCDC171-206ENST00000474193 FUT2Q10981 343 aa21.28■■□□□ 1
CCDC171-206ENST00000474193 AP3B2Q13367 1082 aa21.28■■□□□ 1
CCDC171-206ENST00000474193 MTMR1Q13613 665 aa21.28■■□□□ 1
CCDC171-206ENST00000474193 TOB2Q14106 344 aaPredicted RBP21.28■■□□□ 1
CCDC171-206ENST00000474193 PFKFB3Q16875 520 aaPredicted RBP21.28■■□□□ 1
CCDC171-206ENST00000474193 DEFB128Q7Z7B8 93 aa21.28■■□□□ 1
CCDC171-206ENST00000474193 AFAP1L1Q8TED9 768 aa21.28■■□□□ 1
CCDC171-206ENST00000474193 KIF2CQ99661 725 aa21.28■■□□□ 1
CCDC171-206ENST00000474193 C6orf50Q9HD87 102 aa21.28■■□□□ 1
CCDC171-206ENST00000474193 FAM217BQ9NTX9 383 aaPredicted RBP21.28■■□□□ 1
CCDC171-206ENST00000474193 MSRAQ9UJ68 235 aa21.28■■□□□ 1
CCDC171-206ENST00000474193 STXBP5LQ9Y2K9 1186 aa21.28■■□□□ 1
CCDC171-206ENST00000474193 SLC4A7Q9Y6M7 1214 aa21.28■■□□□ 1
CCDC171-206ENST00000474193 STXBP3O00186 592 aa21.27■■□□□ 1
CCDC171-206ENST00000474193 LGALS2P05162 132 aa21.27■■□□□ 1
CCDC171-206ENST00000474193 GNA11P29992 359 aa21.27■■□□□ 1
CCDC171-206ENST00000474193 AK2P54819 239 aa21.27■■□□□ 1
CCDC171-206ENST00000474193 PTK7Q13308 1070 aa21.27■■□□□ 1
CCDC171-206ENST00000474193 CPLX2Q6PUV4 134 aaKnown RBP21.27■■□□□ 1
CCDC171-206ENST00000474193 SEMA6BQ9H3T3 888 aa21.27■■□□□ 1
CCDC171-206ENST00000474193 C17orf102A2RUQ5 167 aa21.26■□□□□ 0.99
CCDC171-206ENST00000474193 CPLX1O14810 134 aa21.26■□□□□ 0.99
CCDC171-206ENST00000474193 PRPF3O43395 683 aaKnown RBP21.26■□□□□ 0.99
CCDC171-206ENST00000474193 SP4Q02446 784 aa21.26■□□□□ 0.99
CCDC171-206ENST00000474193 RAB30Q15771 203 aa21.26■□□□□ 0.99
CCDC171-206ENST00000474193 UTP14CQ5TAP6 766 aaKnown RBP21.26■□□□□ 0.99
CCDC171-206ENST00000474193 RASIP1Q5U651 963 aa21.26■□□□□ 0.99
CCDC171-206ENST00000474193 TRIM22Q8IYM9 498 aa21.26■□□□□ 0.99
CCDC171-206ENST00000474193 ZNF274Q96GC6 653 aaPredicted RBP21.26■□□□□ 0.99
CCDC171-206ENST00000474193 GPR20Q99678 358 aa21.26■□□□□ 0.99
CCDC171-206ENST00000474193 C16orf70Q9BSU1 422 aa21.26■□□□□ 0.99
CCDC171-206ENST00000474193 JADE2Q9NQC1 790 aa21.26■□□□□ 0.99
CCDC171-206ENST00000474193 UBIAD1Q9Y5Z9 338 aa21.26■□□□□ 0.99
CCDC171-206ENST00000474193 SELPP16109 830 aa21.25■□□□□ 0.99
CCDC171-206ENST00000474193 DNAJB2P25686 324 aa21.25■□□□□ 0.99
CCDC171-206ENST00000474193 SEMA3FQ13275 785 aa21.25■□□□□ 0.99
CCDC171-206ENST00000474193 BICD2Q8TD16 824 aa21.25■□□□□ 0.99
CCDC171-206ENST00000474193 SEPT1Q8WYJ6 367 aa21.25■□□□□ 0.99
CCDC171-206ENST00000474193 TNPO1Q92973 898 aaKnown RBP21.25■□□□□ 0.99
CCDC171-206ENST00000474193 TIFAQ96CG3 184 aa21.25■□□□□ 0.99
CCDC171-206ENST00000474193 MXRA8Q9BRK3 442 aa21.25■□□□□ 0.99
CCDC171-206ENST00000474193 ANO3Q9BYT9 981 aa21.25■□□□□ 0.99
CCDC171-206ENST00000474193 ITGB5P18084 799 aa21.24■□□□□ 0.99
CCDC171-206ENST00000474193 PDIA3P30101 505 aaKnown RBP21.24■□□□□ 0.99
CCDC171-206ENST00000474193 EVCP57679 992 aa21.24■□□□□ 0.99
CCDC171-206ENST00000474193 CCT2P78371 535 aaKnown RBP21.24■□□□□ 0.99
CCDC171-206ENST00000474193 CCDC148Q8NFR7 591 aa21.24■□□□□ 0.99
CCDC171-206ENST00000474193 ATP6V0A1Q93050 837 aa21.24■□□□□ 0.99
CCDC171-206ENST00000474193 SDF4Q9BRK5 362 aa21.24■□□□□ 0.99
CCDC171-206ENST00000474193 LARP6Q9BRS8 491 aaKnown RBP21.24■□□□□ 0.99
CCDC171-206ENST00000474193 RNF26Q9BY78 433 aaPredicted RBP21.24■□□□□ 0.99
CCDC171-206ENST00000474193 ESYT2A0FGR8 921 aa21.23■□□□□ 0.99
CCDC171-206ENST00000474193 IFNAR1P17181 557 aa21.23■□□□□ 0.99
CCDC171-206ENST00000474193 LRRC8DQ7L1W4 858 aa21.23■□□□□ 0.99
CCDC171-206ENST00000474193 SLC26A6Q9BXS9 759 aa21.23■□□□□ 0.99
CCDC171-206ENST00000474193 SLKQ9H2G2 1235 aaPredicted RBP21.23■□□□□ 0.99
CCDC171-206ENST00000474193 BCAS3Q9H6U6 928 aa21.23■□□□□ 0.99
CCDC171-206ENST00000474193 PKD2L1Q9P0L9 805 aa21.23■□□□□ 0.99
CCDC171-206ENST00000474193 LAMA3Q16787 3333 aa21.23■□□□□ 0.99
CCDC171-206ENST00000474193 SZT2Q5T011 3432 aa21.23■□□□□ 0.99
CCDC171-206ENST00000474193 NID2Q14112 1375 aa21.23■□□□□ 0.99
CCDC171-206ENST00000474193 SMIM10L2AP0DMW4 78 aa21.22■□□□□ 0.99
CCDC171-206ENST00000474193 SMIM10L2BP0DMW5 78 aa21.22■□□□□ 0.99
CCDC171-206ENST00000474193 CKBP12277 381 aa21.22■□□□□ 0.99
CCDC171-206ENST00000474193 TCF7P36402 384 aaPredicted RBP21.22■□□□□ 0.99
CCDC171-206ENST00000474193 SSRP1Q08945 709 aaKnown RBP21.22■□□□□ 0.99
CCDC171-206ENST00000474193 STK3Q13188 491 aa21.22■□□□□ 0.99
CCDC171-206ENST00000474193 CEP55Q53EZ4 464 aa21.22■□□□□ 0.99
CCDC171-206ENST00000474193 JAKMIP3Q5VZ66 844 aa21.22■□□□□ 0.99
CCDC171-206ENST00000474193 TYW1BQ6NUM6 668 aa21.22■□□□□ 0.99
CCDC171-206ENST00000474193 REXO1Q8N1G1 1221 aaKnown RBP21.22■□□□□ 0.99
CCDC171-206ENST00000474193 GLG1Q92896 1179 aa21.22■□□□□ 0.99
CCDC171-206ENST00000474193 PHKBQ93100 1093 aa21.22■□□□□ 0.99
CCDC171-206ENST00000474193 ZMYND12Q9H0C1 365 aa21.22■□□□□ 0.99
CCDC171-206ENST00000474193 SMARCAD1Q9H4L7 1026 aa21.22■□□□□ 0.99
CCDC171-206ENST00000474193 KCNH7Q9NS40 1196 aa21.22■□□□□ 0.99
CCDC171-206ENST00000474193 CXXC1Q9P0U4 656 aaPredicted RBP21.22■□□□□ 0.99
CCDC171-206ENST00000474193 LIMCH1Q9UPQ0 1083 aa21.22■□□□□ 0.99
CCDC171-206ENST00000474193 TRIP12Q14669 1992 aaPredicted RBP21.21■□□□□ 0.99
CCDC171-206ENST00000474193 KIF28PB7ZC32 967 aa21.21■□□□□ 0.99
CCDC171-206ENST00000474193 ATP9AO75110 1047 aa21.21■□□□□ 0.99
CCDC171-206ENST00000474193 KCNA2P16389 499 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms