RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, humanhuman

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-204ENST00000474144 RPS6KB1P23443 525 aa22.83■■□□□ 1.25
TMEM54-204ENST00000474144 METAP2P50579 478 aaKnown RBP eCLIP22.83■■□□□ 1.25
TMEM54-204ENST00000474144 RABGGTBP53611 331 aa22.83■■□□□ 1.25
TMEM54-204ENST00000474144 NAPAP54920 295 aa22.83■■□□□ 1.25
TMEM54-204ENST00000474144 SP4Q02446 784 aa22.83■■□□□ 1.25
TMEM54-204ENST00000474144 CAGE1Q8TC20 777 aa22.83■■□□□ 1.25
TMEM54-204ENST00000474144 ZNF576Q9H609 170 aa22.83■■□□□ 1.25
TMEM54-204ENST00000474144 SLC4A7Q9Y6M7 1214 aa22.83■■□□□ 1.25
TMEM54-204ENST00000474144 H3BRB1 525 aa22.82■■□□□ 1.24
TMEM54-204ENST00000474144 RFC2P35250 354 aa22.82■■□□□ 1.24
TMEM54-204ENST00000474144 CCDC155Q8N6L0 562 aa22.82■■□□□ 1.24
TMEM54-204ENST00000474144 AFAP1L1Q8TED9 768 aa22.82■■□□□ 1.24
TMEM54-204ENST00000474144 FTOQ9C0B1 505 aaKnown RBP eCLIP22.82■■□□□ 1.24
TMEM54-204ENST00000474144 TUT1Q9H6E5 874 aaKnown RBP22.82■■□□□ 1.24
TMEM54-204ENST00000474144 RIC8AQ9NPQ8 531 aa22.82■■□□□ 1.24
TMEM54-204ENST00000474144 YBX2Q9Y2T7 364 aaKnown RBP22.82■■□□□ 1.24
TMEM54-204ENST00000474144 UBIAD1Q9Y5Z9 338 aa22.82■■□□□ 1.24
TMEM54-204ENST00000474144 TET1Q8NFU7 2136 aa22.81■■□□□ 1.24
TMEM54-204ENST00000474144 CKBP12277 381 aa22.81■■□□□ 1.24
TMEM54-204ENST00000474144 SELPP16109 830 aa22.81■■□□□ 1.24
TMEM54-204ENST00000474144 RCAN1P53805 252 aa22.81■■□□□ 1.24
TMEM54-204ENST00000474144 PTK7Q13308 1070 aa22.81■■□□□ 1.24
TMEM54-204ENST00000474144 TRIM71Q2Q1W2 868 aaKnown RBP22.81■■□□□ 1.24
TMEM54-204ENST00000474144 UTP14CQ5TAP6 766 aaKnown RBP22.81■■□□□ 1.24
TMEM54-204ENST00000474144 LRRC8DQ7L1W4 858 aa22.81■■□□□ 1.24
TMEM54-204ENST00000474144 TRIM50Q86XT4 487 aa22.81■■□□□ 1.24
TMEM54-204ENST00000474144 GPRASP2Q96D09 838 aa22.81■■□□□ 1.24
TMEM54-204ENST00000474144 SENP7Q9BQF6 1050 aa22.81■■□□□ 1.24
TMEM54-204ENST00000474144 NKX2-4Q9H2Z4 354 aa22.81■■□□□ 1.24
TMEM54-204ENST00000474144 TMEM260Q9NX78 707 aa22.81■■□□□ 1.24
TMEM54-204ENST00000474144 PKD2L1Q9P0L9 805 aa22.81■■□□□ 1.24
TMEM54-204ENST00000474144 SMCO2A6NFE2 343 aa22.8■■□□□ 1.24
TMEM54-204ENST00000474144 SMIM10L2AP0DMW4 78 aa22.8■■□□□ 1.24
TMEM54-204ENST00000474144 SMIM10L2BP0DMW5 78 aa22.8■■□□□ 1.24
TMEM54-204ENST00000474144 MYOGP15173 224 aa22.8■■□□□ 1.24
TMEM54-204ENST00000474144 KCNA2P16389 499 aa22.8■■□□□ 1.24
TMEM54-204ENST00000474144 ADCY7P51828 1080 aa22.8■■□□□ 1.24
TMEM54-204ENST00000474144 RBL2Q08999 1139 aa22.8■■□□□ 1.24
TMEM54-204ENST00000474144 USP26Q9BXU7 913 aa22.8■■□□□ 1.24
TMEM54-204ENST00000474144 PPP4R2Q9NY27 417 aa22.8■■□□□ 1.24
TMEM54-204ENST00000474144 BARHL2Q9NY43 387 aa22.8■■□□□ 1.24
TMEM54-204ENST00000474144 ADAMTS3O15072 1205 aa22.79■■□□□ 1.24
TMEM54-204ENST00000474144 NBNO60934 754 aa22.79■■□□□ 1.24
TMEM54-204ENST00000474144 MTMR1Q13613 665 aa22.79■■□□□ 1.24
TMEM54-204ENST00000474144 RAB30Q15771 203 aa22.79■■□□□ 1.24
TMEM54-204ENST00000474144 ZNF618Q5T7W0 954 aa22.79■■□□□ 1.24
TMEM54-204ENST00000474144 PPP1R18Q6NYC8 613 aa22.79■■□□□ 1.24
TMEM54-204ENST00000474144 TRAF7Q6Q0C0 670 aa22.79■■□□□ 1.24
TMEM54-204ENST00000474144 FBXL16Q8N461 479 aa22.79■■□□□ 1.24
TMEM54-204ENST00000474144 AGXT2Q9BYV1 514 aa22.79■■□□□ 1.24
TMEM54-204ENST00000474144 JADE2Q9NQC1 790 aa22.79■■□□□ 1.24
TMEM54-204ENST00000474144 MSRAQ9UJ68 235 aa22.79■■□□□ 1.24
TMEM54-204ENST00000474144 C17orf102A2RUQ5 167 aa22.78■■□□□ 1.24
TMEM54-204ENST00000474144 PPFIA3O75145 1194 aa22.78■■□□□ 1.24
TMEM54-204ENST00000474144 ACTN1P12814 892 aa22.78■■□□□ 1.24
TMEM54-204ENST00000474144 FOSL2P15408 326 aa22.78■■□□□ 1.24
TMEM54-204ENST00000474144 ATP2A2P16615 1042 aaKnown RBP22.78■■□□□ 1.24
TMEM54-204ENST00000474144 PSMA5P28066 241 aa22.78■■□□□ 1.24
TMEM54-204ENST00000474144 PFKFB3Q16875 520 aaPredicted RBP22.78■■□□□ 1.24
TMEM54-204ENST00000474144 TCTN1Q2MV58 587 aa22.78■■□□□ 1.24
TMEM54-204ENST00000474144 CYP2W1Q8TAV3 490 aa22.78■■□□□ 1.24
TMEM54-204ENST00000474144 RNPEPQ9H4A4 650 aa22.78■■□□□ 1.24
TMEM54-204ENST00000474144 NID2Q14112 1375 aa22.77■■□□□ 1.24
TMEM54-204ENST00000474144 hCG_1984214I3L0E3 225 aa22.77■■□□□ 1.24
TMEM54-204ENST00000474144 TREHO43280 583 aa22.77■■□□□ 1.24
TMEM54-204ENST00000474144 HOXC8P31273 242 aa22.77■■□□□ 1.24
TMEM54-204ENST00000474144 CLK2P49760 499 aaKnown RBP22.77■■□□□ 1.24
TMEM54-204ENST00000474144 PKN1Q16512 942 aa22.77■■□□□ 1.24
TMEM54-204ENST00000474144 SERINC5Q86VE9 423 aa22.77■■□□□ 1.24
TMEM54-204ENST00000474144 ZNF713Q8N859 430 aaPredicted RBP22.77■■□□□ 1.24
TMEM54-204ENST00000474144 GIMAP8Q8ND71 665 aaPredicted RBP22.77■■□□□ 1.24
TMEM54-204ENST00000474144 MAFAQ8NHW3 353 aaPredicted RBP22.77■■□□□ 1.24
TMEM54-204ENST00000474144 ATP6V0A1Q93050 837 aa22.77■■□□□ 1.24
TMEM54-204ENST00000474144 CDHR1Q96JP9 859 aa22.77■■□□□ 1.24
TMEM54-204ENST00000474144 ANO3Q9BYT9 981 aa22.77■■□□□ 1.24
TMEM54-204ENST00000474144 EHMT1Q9H9B1 1298 aa22.77■■□□□ 1.24
TMEM54-204ENST00000474144 UNC80Q8N2C7 3258 aa22.77■■□□□ 1.24
TMEM54-204ENST00000474144 CCDC196A0A1B0GTZ2 297 aa22.76■■□□□ 1.23
TMEM54-204ENST00000474144 GSTTP1A0A1W2PQM5 241 aa22.76■■□□□ 1.23
TMEM54-204ENST00000474144 SCG2P13521 617 aa22.76■■□□□ 1.23
TMEM54-204ENST00000474144 TCF7P36402 384 aaPredicted RBP22.76■■□□□ 1.23
TMEM54-204ENST00000474144 TOB2Q14106 344 aaPredicted RBP22.76■■□□□ 1.23
TMEM54-204ENST00000474144 MBTPS1Q14703 1052 aa22.76■■□□□ 1.23
TMEM54-204ENST00000474144 RUFY3Q7L099 469 aa22.76■■□□□ 1.23
TMEM54-204ENST00000474144 PHKBQ93100 1093 aa22.76■■□□□ 1.23
TMEM54-204ENST00000474144 MXRA8Q9BRK3 442 aa22.76■■□□□ 1.23
TMEM54-204ENST00000474144 PRDM12Q9H4Q4 367 aa22.76■■□□□ 1.23
TMEM54-204ENST00000474144 ZSWIM6Q9HCJ5 1215 aa22.76■■□□□ 1.23
TMEM54-204ENST00000474144 SETD4Q9NVD3 440 aa22.76■■□□□ 1.23
TMEM54-204ENST00000474144 PTPRSQ13332 1948 aa22.76■■□□□ 1.23
TMEM54-204ENST00000474144 CXCL10P02778 98 aa22.75■■□□□ 1.23
TMEM54-204ENST00000474144 THPOP40225 353 aa22.75■■□□□ 1.23
TMEM54-204ENST00000474144 CCT2P78371 535 aaKnown RBP22.75■■□□□ 1.23
TMEM54-204ENST00000474144 LARP6Q9BRS8 491 aaKnown RBP22.75■■□□□ 1.23
TMEM54-204ENST00000474144 KCNH7Q9NS40 1196 aa22.75■■□□□ 1.23
TMEM54-204ENST00000474144 PCDHA11Q9Y5I1 949 aa22.75■■□□□ 1.23
TMEM54-204ENST00000474144 CHD9Q3L8U1 2897 aa22.74■■□□□ 1.23
TMEM54-204ENST00000474144 PRPF3O43395 683 aaKnown RBP22.74■■□□□ 1.23
TMEM54-204ENST00000474144 EPB41L2O43491 1005 aaKnown RBP22.74■■□□□ 1.23
TMEM54-204ENST00000474144 FOSP01100 380 aaPredicted RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms