RNA–Protein interactions for RNA: ENST00000474116.5

CUL4A-208, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-208ENST00000474116 RNPEPQ9H4A4 650 aa20.25■□□□□ 0.83
CUL4A-208ENST00000474116 MAP3K20Q9NYL2 800 aaKnown RBP20.25■□□□□ 0.83
CUL4A-208ENST00000474116 H3BRB1 525 aa20.24■□□□□ 0.83
CUL4A-208ENST00000474116 DHX16O60231 1041 aaKnown RBP20.24■□□□□ 0.83
CUL4A-208ENST00000474116 PPP1R11O60927 126 aaPredicted RBP20.24■□□□□ 0.83
CUL4A-208ENST00000474116 CAND2O75155 1236 aa20.24■□□□□ 0.83
CUL4A-208ENST00000474116 SMIM10L2AP0DMW4 78 aa20.24■□□□□ 0.83
CUL4A-208ENST00000474116 SMIM10L2BP0DMW5 78 aa20.24■□□□□ 0.83
CUL4A-208ENST00000474116 UBA1P22314 1058 aaKnown RBP20.24■□□□□ 0.83
CUL4A-208ENST00000474116 PGM5Q15124 567 aa20.24■□□□□ 0.83
CUL4A-208ENST00000474116 ADHFE1Q8IWW8 467 aa20.24■□□□□ 0.83
CUL4A-208ENST00000474116 GPKOWQ92917 476 aaPredicted RBP eCLIP20.24■□□□□ 0.83
CUL4A-208ENST00000474116 TUT1Q9H6E5 874 aaKnown RBP20.24■□□□□ 0.83
CUL4A-208ENST00000474116 BCAS3Q9H6U6 928 aa20.24■□□□□ 0.83
CUL4A-208ENST00000474116 ZSWIM5Q9P217 1185 aa20.24■□□□□ 0.83
CUL4A-208ENST00000474116 ZBTB47Q9UFB7 747 aaPredicted RBP20.24■□□□□ 0.83
CUL4A-208ENST00000474116 FAM50BQ9Y247 325 aa20.24■□□□□ 0.83
CUL4A-208ENST00000474116 LAMA4Q16363 1823 aa20.24■□□□□ 0.83
CUL4A-208ENST00000474116 RALGAPA2Q2PPJ7 1873 aa20.24■□□□□ 0.83
CUL4A-208ENST00000474116 C5orf42Q9H799 3197 aa20.24■□□□□ 0.83
CUL4A-208ENST00000474116 B4E1Z4 1266 aa20.23■□□□□ 0.83
CUL4A-208ENST00000474116 TRIOO75962 3097 aa20.23■□□□□ 0.83
CUL4A-208ENST00000474116 CTC1Q2NKJ3 1217 aa20.23■□□□□ 0.83
CUL4A-208ENST00000474116 STAG2Q8N3U4 1231 aa20.23■□□□□ 0.83
CUL4A-208ENST00000474116 SAMD3Q8N6K7 520 aa20.23■□□□□ 0.83
CUL4A-208ENST00000474116 ATG2AQ2TAZ0 1938 aa20.23■□□□□ 0.83
CUL4A-208ENST00000474116 LGALS2P05162 132 aa20.22■□□□□ 0.83
CUL4A-208ENST00000474116 LINC00271P0C7V0 271 aa20.22■□□□□ 0.83
CUL4A-208ENST00000474116 HOXA13P31271 388 aaPredicted RBP20.22■□□□□ 0.83
CUL4A-208ENST00000474116 IRS1P35568 1242 aa20.22■□□□□ 0.83
CUL4A-208ENST00000474116 MFAP1P55081 439 aaKnown RBP20.22■□□□□ 0.83
CUL4A-208ENST00000474116 EP400NLQ6ZTU2 488 aa20.22■□□□□ 0.83
CUL4A-208ENST00000474116 ZFP91Q96JP5 570 aaPredicted RBP20.22■□□□□ 0.83
CUL4A-208ENST00000474116 MLXIPQ9HAP2 919 aa20.22■□□□□ 0.83
CUL4A-208ENST00000474116 CLDND1Q9NY35 253 aa20.22■□□□□ 0.83
CUL4A-208ENST00000474116 TRIM6-TRIM34B2RNG4 842 aa20.21■□□□□ 0.83
CUL4A-208ENST00000474116 C5orf67F2Z3F1 127 aa20.21■□□□□ 0.83
CUL4A-208ENST00000474116 NCK2O43639 380 aa20.21■□□□□ 0.83
CUL4A-208ENST00000474116 CTSHP09668 335 aa20.21■□□□□ 0.83
CUL4A-208ENST00000474116 SDSP20132 328 aa20.21■□□□□ 0.83
CUL4A-208ENST00000474116 FAM26DQ5JW98 314 aa20.21■□□□□ 0.83
CUL4A-208ENST00000474116 HFE2Q6ZVN8 426 aa20.21■□□□□ 0.83
CUL4A-208ENST00000474116 RPAINQ86UA6 219 aa20.21■□□□□ 0.83
CUL4A-208ENST00000474116 IFIH1Q9BYX4 1025 aaKnown RBP20.21■□□□□ 0.83
CUL4A-208ENST00000474116 PCDHA1Q9Y5I3 950 aa20.21■□□□□ 0.83
CUL4A-208ENST00000474116 ZBTB5O15062 677 aa20.2■□□□□ 0.82
CUL4A-208ENST00000474116 CCND2P30279 289 aa20.2■□□□□ 0.82
CUL4A-208ENST00000474116 ADAM17P78536 824 aa20.2■□□□□ 0.82
CUL4A-208ENST00000474116 DLX2Q07687 328 aaPredicted RBP20.2■□□□□ 0.82
CUL4A-208ENST00000474116 SMAD2Q15796 467 aaKnown RBP20.2■□□□□ 0.82
CUL4A-208ENST00000474116 APBB2Q92870 758 aa20.2■□□□□ 0.82
CUL4A-208ENST00000474116 RILPL2Q969X0 211 aa20.2■□□□□ 0.82
CUL4A-208ENST00000474116 IL17RAQ96F46 866 aa20.2■□□□□ 0.82
CUL4A-208ENST00000474116 UPF3BQ9BZI7 483 aaKnown RBP20.2■□□□□ 0.82
CUL4A-208ENST00000474116 SETD4Q9NVD3 440 aa20.2■□□□□ 0.82
CUL4A-208ENST00000474116 KLRF2D3W0D1 207 aa20.19■□□□□ 0.82
CUL4A-208ENST00000474116 GRM6O15303 877 aa20.19■□□□□ 0.82
CUL4A-208ENST00000474116 RB1P06400 928 aa20.19■□□□□ 0.82
CUL4A-208ENST00000474116 BMPR1AP36894 532 aa20.19■□□□□ 0.82
CUL4A-208ENST00000474116 HYAL1Q12794 435 aa20.19■□□□□ 0.82
CUL4A-208ENST00000474116 FIBCD1Q8N539 461 aa20.19■□□□□ 0.82
CUL4A-208ENST00000474116 USP26Q9BXU7 913 aa20.19■□□□□ 0.82
CUL4A-208ENST00000474116 LMAN2LQ9H0V9 348 aa20.19■□□□□ 0.82
CUL4A-208ENST00000474116 MAD2L2Q9UI95 211 aa20.19■□□□□ 0.82
CUL4A-208ENST00000474116 PALM3A6NDB9 673 aaPredicted RBP20.18■□□□□ 0.82
CUL4A-208ENST00000474116 MBTPS2O43462 519 aa20.18■□□□□ 0.82
CUL4A-208ENST00000474116 ICAM3P32942 547 aa20.18■□□□□ 0.82
CUL4A-208ENST00000474116 CTNNB1P35222 781 aa20.18■□□□□ 0.82
CUL4A-208ENST00000474116 SLC35G1Q2M3R5 365 aa20.18■□□□□ 0.82
CUL4A-208ENST00000474116 GPR20Q99678 358 aa20.18■□□□□ 0.82
CUL4A-208ENST00000474116 RC3H2Q9HBD1 1191 aaKnown RBP20.18■□□□□ 0.82
CUL4A-208ENST00000474116 ZNF318Q5VUA4 2279 aa20.17■□□□□ 0.82
CUL4A-208ENST00000474116 SPATA31C2B4DYI2 1134 aa20.17■□□□□ 0.82
CUL4A-208ENST00000474116 GCOM1H8Y6P7 765 aaPredicted RBP20.17■□□□□ 0.82
CUL4A-208ENST00000474116 CHRNA1P02708 482 aa20.17■□□□□ 0.82
CUL4A-208ENST00000474116 POLR2MP0CAP2 368 aa20.17■□□□□ 0.82
CUL4A-208ENST00000474116 GNAT1P11488 350 aa20.17■□□□□ 0.82
CUL4A-208ENST00000474116 MRPS9P82933 396 aaKnown RBP20.17■□□□□ 0.82
CUL4A-208ENST00000474116 HDAC1Q13547 482 aaPredicted RBP20.17■□□□□ 0.82
CUL4A-208ENST00000474116 SEC23AQ15436 765 aa20.17■□□□□ 0.82
CUL4A-208ENST00000474116 HERC4Q5GLZ8 1057 aaPredicted RBP20.17■□□□□ 0.82
CUL4A-208ENST00000474116 CLP1Q92989 425 aaKnown RBP20.17■□□□□ 0.82
CUL4A-208ENST00000474116 TELO2Q9Y4R8 837 aa20.17■□□□□ 0.82
CUL4A-208ENST00000474116 MYO7AQ13402 2215 aa20.17■□□□□ 0.82
CUL4A-208ENST00000474116 NOP56O00567 594 aaKnown RBP20.16■□□□□ 0.82
CUL4A-208ENST00000474116 SEMA3FQ13275 785 aa20.16■□□□□ 0.82
CUL4A-208ENST00000474116 CLUL1Q15846 466 aa20.16■□□□□ 0.82
CUL4A-208ENST00000474116 IFIT1BQ5T764 474 aaKnown RBP20.16■□□□□ 0.82
CUL4A-208ENST00000474116 METTL7BQ6UX53 244 aa20.16■□□□□ 0.82
CUL4A-208ENST00000474116 CYFIP1Q7L576 1253 aa20.16■□□□□ 0.82
CUL4A-208ENST00000474116 FCHSD1Q86WN1 690 aa20.16■□□□□ 0.82
CUL4A-208ENST00000474116 MFSD14AQ96MC6 490 aa20.16■□□□□ 0.82
CUL4A-208ENST00000474116 C11orf84Q9BUA3 381 aaPredicted RBP20.16■□□□□ 0.82
CUL4A-208ENST00000474116 KRT23Q9C075 422 aa20.16■□□□□ 0.82
CUL4A-208ENST00000474116 EHMT1Q9H9B1 1298 aa20.16■□□□□ 0.82
CUL4A-208ENST00000474116 MUTYHQ9UIF7 546 aa20.16■□□□□ 0.82
CUL4A-208ENST00000474116 TBX10O75333 385 aa20.15■□□□□ 0.82
CUL4A-208ENST00000474116 GTF2F1P35269 517 aaKnown RBP eCLIP20.15■□□□□ 0.828e-7■□□□□ 10.9
CUL4A-208ENST00000474116 NEDD9Q14511 834 aa20.15■□□□□ 0.82
CUL4A-208ENST00000474116 CWC27Q6UX04 472 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms