RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 LCP1P13796 627 aa5.6□□□□□ -1.51
BRCA1-212ENST00000473961 CCND1P24385 295 aa5.6□□□□□ -1.51
BRCA1-212ENST00000473961 ADCYAP1R1P41586 468 aa5.6□□□□□ -1.51
BRCA1-212ENST00000473961 EGR3Q06889 387 aa5.6□□□□□ -1.51
BRCA1-212ENST00000473961 HDGFL2Q7Z4V5 671 aaPredicted RBP5.6□□□□□ -1.51
BRCA1-212ENST00000473961 AMIGO3Q86WK7 504 aa5.6□□□□□ -1.51
BRCA1-212ENST00000473961 CHPFQ8IZ52 775 aa5.6□□□□□ -1.51
BRCA1-212ENST00000473961 NXPE1Q8N323 547 aa5.6□□□□□ -1.51
BRCA1-212ENST00000473961 EFHBQ8N7U6 833 aa5.6□□□□□ -1.51
BRCA1-212ENST00000473961 FAM181AQ8N9Y4 354 aa5.6□□□□□ -1.51
BRCA1-212ENST00000473961 MISP3Q96FF7 219 aa5.6□□□□□ -1.51
BRCA1-212ENST00000473961 HRASLS5Q96KN8 279 aa5.6□□□□□ -1.51
BRCA1-212ENST00000473961 C20orf173Q96LM9 149 aa5.6□□□□□ -1.51
BRCA1-212ENST00000473961 BOCQ9BWV1 1114 aa5.6□□□□□ -1.51
BRCA1-212ENST00000473961 IPPKQ9H8X2 491 aa5.6□□□□□ -1.51
BRCA1-212ENST00000473961 EMC7Q9NPA0 242 aa5.6□□□□□ -1.51
BRCA1-212ENST00000473961 ZIM2Q9NZV7 527 aa5.6□□□□□ -1.51
BRCA1-212ENST00000473961 TNFRSF10DQ9UBN6 386 aa5.6□□□□□ -1.51
BRCA1-212ENST00000473961 ZNF652Q9Y2D9 606 aa5.6□□□□□ -1.51
BRCA1-212ENST00000473961 PCDHA11Q9Y5I1 949 aa5.6□□□□□ -1.51
BRCA1-212ENST00000473961 PITPNM2Q9BZ72 1349 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 A0A1W2PQ27 194 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 A0A1W2PQ64 194 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 A0A1W2PQC6 194 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 A0A1W2PQD8 194 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 SLC12A8A0AV02 714 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 SHTN1A0MZ66 631 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 C7orf72A4D263 438 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 K7ESF4 209 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 TRAF5O00463 557 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 MAFKO60675 156 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 CAND2O75155 1236 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 DGKIO75912 1065 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 CFBP00751 764 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 KRT1P04264 644 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 CD8BP10966 210 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 MECP2P51608 486 aaKnown RBP5.59□□□□□ -1.51
BRCA1-212ENST00000473961 CORO7P57737 925 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 CHRNA2Q15822 529 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 DDB1Q16531 1140 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 INF2Q27J81 1249 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 LHFPL2Q6ZUX7 228 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 OVCH1Q7RTY7 1134 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 CPNE8Q86YQ8 564 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 MYO1HQ8N1T3 1032 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 CISD2Q8N5K1 135 aaKnown RBP5.59□□□□□ -1.51
BRCA1-212ENST00000473961 TRMT2BQ96GJ1 504 aaKnown RBP5.59□□□□□ -1.51
BRCA1-212ENST00000473961 AHCYL2Q96HN2 611 aaKnown RBP5.59□□□□□ -1.51
BRCA1-212ENST00000473961 YIPF4Q9BSR8 244 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 CHMP4AQ9BY43 222 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 EPB41L1Q9H4G0 881 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 PCIF1Q9H4Z3 704 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 CRTAC1Q9NQ79 661 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 MRFAP1Q9Y605 127 aa5.59□□□□□ -1.51
BRCA1-212ENST00000473961 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-212ENST00000473961 KRIT1O00522 736 aa5.58□□□□□ -1.52
BRCA1-212ENST00000473961 AKAP10O43572 662 aa5.58□□□□□ -1.52
BRCA1-212ENST00000473961 SNUPNO95149 360 aaKnown RBP5.58□□□□□ -1.52
BRCA1-212ENST00000473961 SCGB1D2O95969 90 aa5.58□□□□□ -1.52
BRCA1-212ENST00000473961 ATP2A2P16615 1042 aaKnown RBP5.58□□□□□ -1.52
BRCA1-212ENST00000473961 ATF3P18847 181 aa5.58□□□□□ -1.52
BRCA1-212ENST00000473961 ID4P47928 161 aa5.58□□□□□ -1.52
BRCA1-212ENST00000473961 RAB27AP51159 221 aa5.58□□□□□ -1.52
BRCA1-212ENST00000473961 LACTBP83111 547 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-212ENST00000473961 GPR19Q15760 415 aa5.58□□□□□ -1.52
BRCA1-212ENST00000473961 SKOR2Q2VWA4 1001 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-212ENST00000473961 ZSWIM9Q86XI8 627 aa5.58□□□□□ -1.52
BRCA1-212ENST00000473961 NLGN4XQ8N0W4 816 aa5.58□□□□□ -1.52
BRCA1-212ENST00000473961 CHTF18Q8WVB6 975 aa5.58□□□□□ -1.52
BRCA1-212ENST00000473961 SLC5A5Q92911 643 aa5.58□□□□□ -1.52
BRCA1-212ENST00000473961 KCNJ15Q99712 375 aa5.58□□□□□ -1.52
BRCA1-212ENST00000473961 CDH19Q9H159 772 aa5.58□□□□□ -1.52
BRCA1-212ENST00000473961 LUC7LQ9NQ29 371 aaKnown RBP5.58□□□□□ -1.52
BRCA1-212ENST00000473961 SEMA3GQ9NS98 782 aa5.58□□□□□ -1.52
BRCA1-212ENST00000473961 ERVK13-1Q9NX77 482 aa5.58□□□□□ -1.52
BRCA1-212ENST00000473961 BTG4Q9NY30 223 aa5.58□□□□□ -1.52
BRCA1-212ENST00000473961 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.58□□□□□ -1.52
BRCA1-212ENST00000473961 A0A1W2PQ45 241 aaPredicted RBP5.57□□□□□ -1.52
BRCA1-212ENST00000473961 A0A1W2PQY0 241 aa5.57□□□□□ -1.52
BRCA1-212ENST00000473961 GABRDO14764 452 aa5.57□□□□□ -1.52
BRCA1-212ENST00000473961 PRKD3O94806 890 aa5.57□□□□□ -1.52
BRCA1-212ENST00000473961 KRT18P05783 430 aaKnown RBP5.57□□□□□ -1.52
BRCA1-212ENST00000473961 C1QTNF9P0C862 333 aa5.57□□□□□ -1.52
BRCA1-212ENST00000473961 VCAM1P19320 739 aa5.57□□□□□ -1.52
BRCA1-212ENST00000473961 HOXA5P20719 270 aa5.57□□□□□ -1.52
BRCA1-212ENST00000473961 LSP1P33241 339 aa5.57□□□□□ -1.52
BRCA1-212ENST00000473961 BCL6P41182 706 aa5.57□□□□□ -1.52
BRCA1-212ENST00000473961 KRTAP10-2P60368 255 aa5.57□□□□□ -1.52
BRCA1-212ENST00000473961 TEKQ02763 1124 aa5.57□□□□□ -1.52
BRCA1-212ENST00000473961 PTPN21Q16825 1174 aa5.57□□□□□ -1.52
BRCA1-212ENST00000473961 MROH9Q5TGP6 573 aa5.57□□□□□ -1.52
BRCA1-212ENST00000473961 DBX2Q6ZNG2 339 aa5.57□□□□□ -1.52
BRCA1-212ENST00000473961 SYDE1Q6ZW31 735 aaPredicted RBP5.57□□□□□ -1.52
BRCA1-212ENST00000473961 CEP68Q76N32 757 aa5.57□□□□□ -1.52
BRCA1-212ENST00000473961 OTOP1Q7RTM1 612 aa5.57□□□□□ -1.52
BRCA1-212ENST00000473961 CABP7Q86V35 215 aa5.57□□□□□ -1.52
BRCA1-212ENST00000473961 AMOTL1Q8IY63 956 aa5.57□□□□□ -1.52
BRCA1-212ENST00000473961 ZZZ3Q8IYH5 903 aa5.57□□□□□ -1.52
BRCA1-212ENST00000473961 FLAD1Q8NFF5 587 aa5.57□□□□□ -1.52
BRCA1-212ENST00000473961 USP33Q8TEY7 942 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms