RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 PTPN11Q06124 597 aaPredicted RBP20.16■□□□□ 0.82
RPUSD3-214ENST00000473522 NBPF20Q3BBV1 942 aa20.16■□□□□ 0.82
RPUSD3-214ENST00000473522 NFRKBQ6P4R8 1299 aa20.16■□□□□ 0.82
RPUSD3-214ENST00000473522 CCDC83Q8IWF9 413 aa20.16■□□□□ 0.82
RPUSD3-214ENST00000473522 TRIM43Q96BQ3 446 aaPredicted RBP20.16■□□□□ 0.82
RPUSD3-214ENST00000473522 GPR20Q99678 358 aa20.16■□□□□ 0.82
RPUSD3-214ENST00000473522 GDF15Q99988 308 aa20.16■□□□□ 0.82
RPUSD3-214ENST00000473522 C16orf70Q9BSU1 422 aa20.16■□□□□ 0.82
RPUSD3-214ENST00000473522 PRO3102Q9H379 93 aa20.16■□□□□ 0.82
RPUSD3-214ENST00000473522 PDLIM7Q9NR12 457 aa20.16■□□□□ 0.82
RPUSD3-214ENST00000473522 GJB4Q9NTQ9 266 aa20.16■□□□□ 0.82
RPUSD3-214ENST00000473522 HAS3O00219 553 aa20.15■□□□□ 0.82
RPUSD3-214ENST00000473522 F2P00734 622 aa20.15■□□□□ 0.82
RPUSD3-214ENST00000473522 SYN1P17600 705 aa20.15■□□□□ 0.82
RPUSD3-214ENST00000473522 SH3RF1Q7Z6J0 888 aa20.15■□□□□ 0.82
RPUSD3-214ENST00000473522 SESTD1Q86VW0 696 aa20.15■□□□□ 0.82
RPUSD3-214ENST00000473522 AGO4Q9HCK5 861 aaKnown RBP20.15■□□□□ 0.82
RPUSD3-214ENST00000473522 MYH6P13533 1939 aa20.14■□□□□ 0.81
RPUSD3-214ENST00000473522 NFASCO94856 1347 aa20.14■□□□□ 0.81
RPUSD3-214ENST00000473522 CYP3A7-CYP3A51PA0A087WV96 503 aa20.14■□□□□ 0.81
RPUSD3-214ENST00000473522 SORBS3O60504 671 aa20.14■□□□□ 0.81
RPUSD3-214ENST00000473522 CYP3A7P24462 503 aa20.14■□□□□ 0.81
RPUSD3-214ENST00000473522 BMP8BP34820 402 aa20.14■□□□□ 0.81
RPUSD3-214ENST00000473522 TBCKQ8TEA7 893 aa20.14■□□□□ 0.81
RPUSD3-214ENST00000473522 TMEM39AQ9NV64 488 aa20.14■□□□□ 0.81
RPUSD3-214ENST00000473522 PRKAG2Q9UGJ0 569 aa20.14■□□□□ 0.81
RPUSD3-214ENST00000473522 TBX21Q9UL17 535 aa20.14■□□□□ 0.81
RPUSD3-214ENST00000473522 FRMPD3Q5JV73 1810 aa20.13■□□□□ 0.81
RPUSD3-214ENST00000473522 CD2BP2O95400 341 aaKnown RBP20.13■□□□□ 0.81
RPUSD3-214ENST00000473522 ITGB3BPQ13352 177 aaPredicted RBP20.13■□□□□ 0.81
RPUSD3-214ENST00000473522 KRT25Q7Z3Z0 450 aa20.13■□□□□ 0.81
RPUSD3-214ENST00000473522 PLA2G4DQ86XP0 818 aa20.13■□□□□ 0.81
RPUSD3-214ENST00000473522 SEPT1Q8WYJ6 367 aa20.13■□□□□ 0.81
RPUSD3-214ENST00000473522 LENG9Q96B70 501 aa20.13■□□□□ 0.81
RPUSD3-214ENST00000473522 TMX3Q96JJ7 454 aa20.13■□□□□ 0.81
RPUSD3-214ENST00000473522 KATNAL1Q9BW62 490 aa20.13■□□□□ 0.81
RPUSD3-214ENST00000473522 TELO2Q9Y4R8 837 aa20.13■□□□□ 0.81
RPUSD3-214ENST00000473522 GSTTP1A0A1W2PQM5 241 aa20.12■□□□□ 0.81
RPUSD3-214ENST00000473522 NOP56O00567 594 aaKnown RBP20.12■□□□□ 0.81
RPUSD3-214ENST00000473522 TLR3O15455 904 aaKnown RBP20.12■□□□□ 0.81
RPUSD3-214ENST00000473522 DHX15O43143 795 aaKnown RBP20.12■□□□□ 0.81
RPUSD3-214ENST00000473522 SUPT20HL2P0C7V6 817 aa20.12■□□□□ 0.81
RPUSD3-214ENST00000473522 PSEN2P49810 448 aa20.12■□□□□ 0.81
RPUSD3-214ENST00000473522 HMGN5P82970 282 aaKnown RBP20.12■□□□□ 0.81
RPUSD3-214ENST00000473522 MOXD1Q6UVY6 613 aa20.12■□□□□ 0.81
RPUSD3-214ENST00000473522 OXER1Q8TDS5 423 aa20.12■□□□□ 0.81
RPUSD3-214ENST00000473522 MBOAT7Q96N66 472 aa20.12■□□□□ 0.81
RPUSD3-214ENST00000473522 TRPV6Q9H1D0 765 aa20.12■□□□□ 0.81
RPUSD3-214ENST00000473522 H3BRB1 525 aa20.11■□□□□ 0.81
RPUSD3-214ENST00000473522 B4GALT4O60513 344 aa20.11■□□□□ 0.81
RPUSD3-214ENST00000473522 ATG7O95352 703 aa20.11■□□□□ 0.81
RPUSD3-214ENST00000473522 MMP1P03956 469 aa20.11■□□□□ 0.81
RPUSD3-214ENST00000473522 ITGB8P26012 769 aa20.11■□□□□ 0.81
RPUSD3-214ENST00000473522 SETQ01105 290 aaPredicted RBP20.11■□□□□ 0.81
RPUSD3-214ENST00000473522 NONOQ15233 471 aaKnown RBP eCLIP20.11■□□□□ 0.81
RPUSD3-214ENST00000473522 Q4G0T1 1027 aa20.11■□□□□ 0.81
RPUSD3-214ENST00000473522 TNFRSF25Q93038 417 aa20.11■□□□□ 0.81
RPUSD3-214ENST00000473522 SDF4Q9BRK5 362 aa20.11■□□□□ 0.81
RPUSD3-214ENST00000473522 TUT1Q9H6E5 874 aaKnown RBP20.11■□□□□ 0.81
RPUSD3-214ENST00000473522 TBC1D22BQ9NU19 505 aa20.11■□□□□ 0.81
RPUSD3-214ENST00000473522 SLC9A2Q9UBY0 812 aa20.11■□□□□ 0.81
RPUSD3-214ENST00000473522 COLQQ9Y215 455 aaPredicted RBP20.11■□□□□ 0.81
RPUSD3-214ENST00000473522 IPO5O00410 1097 aaKnown RBP20.1■□□□□ 0.81
RPUSD3-214ENST00000473522 TIMP1P01033 207 aa20.1■□□□□ 0.81
RPUSD3-214ENST00000473522 LGALS2P05162 132 aa20.1■□□□□ 0.81
RPUSD3-214ENST00000473522 MAGEA10P43363 369 aaPredicted RBP20.1■□□□□ 0.81
RPUSD3-214ENST00000473522 MFSD10Q14728 455 aa20.1■□□□□ 0.81
RPUSD3-214ENST00000473522 KIAA0753Q2KHM9 967 aa20.1■□□□□ 0.81
RPUSD3-214ENST00000473522 PRR16Q569H4 304 aa20.1■□□□□ 0.81
RPUSD3-214ENST00000473522 KRT40Q6A162 431 aa20.1■□□□□ 0.81
RPUSD3-214ENST00000473522 JPH1Q9HDC5 661 aaPredicted RBP20.1■□□□□ 0.81
RPUSD3-214ENST00000473522 PRDM5Q9NQX1 630 aaPredicted RBP20.1■□□□□ 0.81
RPUSD3-214ENST00000473522 PKD2L1Q9P0L9 805 aa20.1■□□□□ 0.81
RPUSD3-214ENST00000473522 ZNF286BP0CG31 522 aa20.09■□□□□ 0.81
RPUSD3-214ENST00000473522 KRT2P35908 639 aa20.09■□□□□ 0.81
RPUSD3-214ENST00000473522 TCF7P36402 384 aaPredicted RBP20.09■□□□□ 0.81
RPUSD3-214ENST00000473522 CHRDL2Q6WN34 429 aa20.09■□□□□ 0.81
RPUSD3-214ENST00000473522 ZNF577Q9BSK1 485 aa20.09■□□□□ 0.81
RPUSD3-214ENST00000473522 TRMT13Q9NUP7 481 aaKnown RBP20.09■□□□□ 0.81
RPUSD3-214ENST00000473522 HDAC6Q9UBN7 1215 aa20.09■□□□□ 0.81
RPUSD3-214ENST00000473522 GTF2IRD1Q9UHL9 959 aa20.09■□□□□ 0.81
RPUSD3-214ENST00000473522 CEP290O15078 2479 aa20.08■□□□□ 0.81
RPUSD3-214ENST00000473522 CCDC194A0A1B0GVG4 234 aa20.08■□□□□ 0.81
RPUSD3-214ENST00000473522 BTBD18B2RXH4 712 aa20.08■□□□□ 0.81
RPUSD3-214ENST00000473522 LGR5O75473 907 aa20.08■□□□□ 0.81
RPUSD3-214ENST00000473522 RAG1P15918 1043 aa20.08■□□□□ 0.81
RPUSD3-214ENST00000473522 HOXC8P31273 242 aa20.08■□□□□ 0.81
RPUSD3-214ENST00000473522 ACTR2P61160 394 aa20.08■□□□□ 0.81
RPUSD3-214ENST00000473522 TRIM29Q14134 588 aa20.08■□□□□ 0.81
RPUSD3-214ENST00000473522 INF2Q27J81 1249 aa20.08■□□□□ 0.81
RPUSD3-214ENST00000473522 EARS2Q5JPH6 523 aaKnown RBP20.08■□□□□ 0.81
RPUSD3-214ENST00000473522 PPP4R3AQ6IN85 833 aa20.08■□□□□ 0.81
RPUSD3-214ENST00000473522 C7orf31Q8N865 590 aa20.08■□□□□ 0.81
RPUSD3-214ENST00000473522 FBXO18Q8NFZ0 1043 aa20.08■□□□□ 0.81
RPUSD3-214ENST00000473522 BADQ92934 168 aa20.08■□□□□ 0.81
RPUSD3-214ENST00000473522 CTAGE1Q96RT6 745 aa20.08■□□□□ 0.81
RPUSD3-214ENST00000473522 LBHD1Q9BQE6 289 aaPredicted RBP20.08■□□□□ 0.81
RPUSD3-214ENST00000473522 BRMS1Q9HCU9 246 aa20.08■□□□□ 0.81
RPUSD3-214ENST00000473522 IGKV6D-21A0A0A0MT36 114 aa20.07■□□□□ 0.8
RPUSD3-214ENST00000473522 MSH4O15457 936 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms