RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 TMEM192Q8IY95 271 aa14.7□□□□□ -0.06
TRAF4-209ENST00000473421 ATP6V0A1Q93050 837 aa14.7□□□□□ -0.06
TRAF4-209ENST00000473421 MTMR8Q96EF0 704 aa14.7□□□□□ -0.06
TRAF4-209ENST00000473421 SENP2Q9HC62 589 aa14.7□□□□□ -0.06
TRAF4-209ENST00000473421 SETD4Q9NVD3 440 aa14.7□□□□□ -0.06
TRAF4-209ENST00000473421 LAMA4Q16363 1823 aa14.7□□□□□ -0.06
TRAF4-209ENST00000473421 H3BRB1 525 aa14.69□□□□□ -0.06
TRAF4-209ENST00000473421 LGALS2P05162 132 aa14.69□□□□□ -0.06
TRAF4-209ENST00000473421 PARP1P09874 1014 aaKnown RBP14.69□□□□□ -0.06
TRAF4-209ENST00000473421 SEMA3FQ13275 785 aa14.69□□□□□ -0.06
TRAF4-209ENST00000473421 CLUL1Q15846 466 aa14.69□□□□□ -0.06
TRAF4-209ENST00000473421 CWC27Q6UX04 472 aaKnown RBP14.69□□□□□ -0.06
TRAF4-209ENST00000473421 CYB5R4Q7L1T6 521 aa14.69□□□□□ -0.06
TRAF4-209ENST00000473421 FCHSD1Q86WN1 690 aa14.69□□□□□ -0.06
TRAF4-209ENST00000473421 FBXL18Q96ME1 805 aa14.69□□□□□ -0.06
TRAF4-209ENST00000473421 YME1L1Q96TA2 773 aa14.69□□□□□ -0.06
TRAF4-209ENST00000473421 RNF41Q9H4P4 317 aaPredicted RBP14.69□□□□□ -0.06
TRAF4-209ENST00000473421 TUT1Q9H6E5 874 aaKnown RBP14.69□□□□□ -0.06
TRAF4-209ENST00000473421 MAD2L2Q9UI95 211 aa14.69□□□□□ -0.06
TRAF4-209ENST00000473421 C17orf102A2RUQ5 167 aa14.68□□□□□ -0.06
TRAF4-209ENST00000473421 C19orf67A6NJJ6 358 aa14.68□□□□□ -0.06
TRAF4-209ENST00000473421 KLRF2D3W0D1 207 aa14.68□□□□□ -0.06
TRAF4-209ENST00000473421 GRM6O15303 877 aa14.68□□□□□ -0.06
TRAF4-209ENST00000473421 CSPG5O95196 566 aa14.68□□□□□ -0.06
TRAF4-209ENST00000473421 IRS1P35568 1242 aa14.68□□□□□ -0.06
TRAF4-209ENST00000473421 MRE11P49959 708 aa14.68□□□□□ -0.06
TRAF4-209ENST00000473421 MRPS9P82933 396 aaKnown RBP14.68□□□□□ -0.06
TRAF4-209ENST00000473421 NHLH1Q02575 133 aa14.68□□□□□ -0.06
TRAF4-209ENST00000473421 SEC23AQ15436 765 aa14.68□□□□□ -0.06
TRAF4-209ENST00000473421 IQCA1Q86XH1 822 aa14.68□□□□□ -0.06
TRAF4-209ENST00000473421 PABPC5Q96DU9 382 aaKnown RBP14.68□□□□□ -0.06
TRAF4-209ENST00000473421 PHOX2BQ99453 314 aa14.68□□□□□ -0.06
TRAF4-209ENST00000473421 AMNQ9BXJ7 453 aa14.68□□□□□ -0.06
TRAF4-209ENST00000473421 MAF1Q9H063 256 aa14.68□□□□□ -0.06
TRAF4-209ENST00000473421 CLDND1Q9NY35 253 aa14.68□□□□□ -0.06
TRAF4-209ENST00000473421 PCDHA1Q9Y5I3 950 aa14.68□□□□□ -0.06
TRAF4-209ENST00000473421 EMSYQ7Z589 1322 aa14.67□□□□□ -0.06
TRAF4-209ENST00000473421 ZNF318Q5VUA4 2279 aa14.67□□□□□ -0.06
TRAF4-209ENST00000473421 LINC01565O15544 149 aa14.67□□□□□ -0.06
TRAF4-209ENST00000473421 DCXO43602 365 aa14.67□□□□□ -0.06
TRAF4-209ENST00000473421 CYTH3O43739 400 aa14.67□□□□□ -0.06
TRAF4-209ENST00000473421 CHRNA1P02708 482 aa14.67□□□□□ -0.06
TRAF4-209ENST00000473421 ADAM17P78536 824 aa14.67□□□□□ -0.06
TRAF4-209ENST00000473421 HYAL1Q12794 435 aa14.67□□□□□ -0.06
TRAF4-209ENST00000473421 HFE2Q6ZVN8 426 aa14.67□□□□□ -0.06
TRAF4-209ENST00000473421 SEPT8Q92599 483 aa14.67□□□□□ -0.06
TRAF4-209ENST00000473421 PIGSQ96S52 555 aa14.67□□□□□ -0.06
TRAF4-209ENST00000473421 IFIH1Q9BYX4 1025 aaKnown RBP14.67□□□□□ -0.06
TRAF4-209ENST00000473421 RTEL1Q9NZ71 1219 aa14.67□□□□□ -0.06
TRAF4-209ENST00000473421 TAF6LQ9Y6J9 622 aa14.67□□□□□ -0.06
TRAF4-209ENST00000473421 COL4A6Q14031 1691 aa14.67□□□□□ -0.06
TRAF4-209ENST00000473421 PALM3A6NDB9 673 aaPredicted RBP14.66□□□□□ -0.06
TRAF4-209ENST00000473421 ZBTB5O15062 677 aa14.66□□□□□ -0.06
TRAF4-209ENST00000473421 ALADP13716 330 aa14.66□□□□□ -0.06
TRAF4-209ENST00000473421 HDAC1Q13547 482 aaPredicted RBP14.66□□□□□ -0.06
TRAF4-209ENST00000473421 CAMK1Q14012 370 aa14.66□□□□□ -0.06
TRAF4-209ENST00000473421 CTC1Q2NKJ3 1217 aa14.66□□□□□ -0.06
TRAF4-209ENST00000473421 B4GALNT3Q6L9W6 998 aa14.66□□□□□ -0.06
TRAF4-209ENST00000473421 RUFY4Q6ZNE9 571 aa14.66□□□□□ -0.06
TRAF4-209ENST00000473421 RPAINQ86UA6 219 aa14.66□□□□□ -0.06
TRAF4-209ENST00000473421 HOMER1Q86YM7 354 aa14.66□□□□□ -0.06
TRAF4-209ENST00000473421 PLEKHM2Q8IWE5 1019 aa14.66□□□□□ -0.06
TRAF4-209ENST00000473421 ZBTB10Q96DT7 871 aa14.66□□□□□ -0.06
TRAF4-209ENST00000473421 NSUN3Q9H649 340 aaKnown RBP14.66□□□□□ -0.06
TRAF4-209ENST00000473421 MLXIPQ9HAP2 919 aa14.66□□□□□ -0.06
TRAF4-209ENST00000473421 TECTAO75443 2155 aa14.66□□□□□ -0.06
TRAF4-209ENST00000473421 PTPROQ16827 1216 aa14.65□□□□□ -0.06
TRAF4-209ENST00000473421 TIGD5Q53EQ6 642 aa14.65□□□□□ -0.06
TRAF4-209ENST00000473421 CYFIP1Q7L576 1253 aa14.65□□□□□ -0.06
TRAF4-209ENST00000473421 ADHFE1Q8IWW8 467 aa14.65□□□□□ -0.06
TRAF4-209ENST00000473421 LMBR1Q8WVP7 490 aa14.65□□□□□ -0.06
TRAF4-209ENST00000473421 GPR20Q99678 358 aa14.65□□□□□ -0.06
TRAF4-209ENST00000473421 MUTYHQ9UIF7 546 aa14.65□□□□□ -0.06
TRAF4-209ENST00000473421 TBX10O75333 385 aa14.64□□□□□ -0.07
TRAF4-209ENST00000473421 TGFB3P10600 412 aa14.64□□□□□ -0.07
TRAF4-209ENST00000473421 DNAJB1P25685 340 aa14.64□□□□□ -0.07
TRAF4-209ENST00000473421 CCND2P30279 289 aa14.64□□□□□ -0.07
TRAF4-209ENST00000473421 CTNNB1P35222 781 aa14.64□□□□□ -0.07
TRAF4-209ENST00000473421 RRP1P56182 461 aaKnown RBP14.64□□□□□ -0.07
TRAF4-209ENST00000473421 SP4Q02446 784 aa14.64□□□□□ -0.07
TRAF4-209ENST00000473421 FAM26DQ5JW98 314 aa14.64□□□□□ -0.07
TRAF4-209ENST00000473421 IFIT1BQ5T764 474 aaKnown RBP14.64□□□□□ -0.07
TRAF4-209ENST00000473421 UTP14CQ5TAP6 766 aaKnown RBP14.64□□□□□ -0.07
TRAF4-209ENST00000473421 PIBF1Q8WXW3 757 aa14.64□□□□□ -0.07
TRAF4-209ENST00000473421 RC3H2Q9HBD1 1191 aaKnown RBP14.64□□□□□ -0.07
TRAF4-209ENST00000473421 ZBTB47Q9UFB7 747 aaPredicted RBP14.64□□□□□ -0.07
TRAF4-209ENST00000473421 CTNNA3Q9UI47 895 aa14.64□□□□□ -0.07
TRAF4-209ENST00000473421 RALGAPA2Q2PPJ7 1873 aa14.63□□□□□ -0.07
TRAF4-209ENST00000473421 SPATA31C2B4DYI2 1134 aa14.63□□□□□ -0.07
TRAF4-209ENST00000473421 C5orf67F2Z3F1 127 aa14.63□□□□□ -0.07
TRAF4-209ENST00000473421 GCOM1H8Y6P7 765 aaPredicted RBP14.63□□□□□ -0.07
TRAF4-209ENST00000473421 MBTPS2O43462 519 aa14.63□□□□□ -0.07
TRAF4-209ENST00000473421 IGHDP01880 384 aa14.63□□□□□ -0.07
TRAF4-209ENST00000473421 POLR2MP0CAP2 368 aa14.63□□□□□ -0.07
TRAF4-209ENST00000473421 GHRP10912 638 aa14.63□□□□□ -0.07
TRAF4-209ENST00000473421 BMPR1AP36894 532 aa14.63□□□□□ -0.07
TRAF4-209ENST00000473421 ARHGAP4P98171 946 aa14.63□□□□□ -0.07
TRAF4-209ENST00000473421 CSPP1Q1MSJ5 1256 aa14.63□□□□□ -0.07
TRAF4-209ENST00000473421 PUS10Q3MIT2 529 aaKnown RBP14.63□□□□□ -0.07
TRAF4-209ENST00000473421 CCDC178Q5BJE1 867 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms