RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 PTGISQ16647 500 aa20.71■□□□□ 0.91
SNX4-204ENST00000473417 HSDL1Q3SXM5 330 aa20.71■□□□□ 0.91
SNX4-204ENST00000473417 CELF3Q5SZQ8 465 aaKnown RBP20.71■□□□□ 0.91
SNX4-204ENST00000473417 KATNAL1Q9BW62 490 aa20.71■□□□□ 0.91
SNX4-204ENST00000473417 SLC26A6Q9BXS9 759 aa20.71■□□□□ 0.91
SNX4-204ENST00000473417 HAS3O00219 553 aa20.7■□□□□ 0.9
SNX4-204ENST00000473417 PIK3CDO00329 1044 aa20.7■□□□□ 0.9
SNX4-204ENST00000473417 PRPF3O43395 683 aaKnown RBP20.7■□□□□ 0.9
SNX4-204ENST00000473417 STAM2O75886 525 aa20.7■□□□□ 0.9
SNX4-204ENST00000473417 IQCF3P0C7M6 154 aa20.7■□□□□ 0.9
SNX4-204ENST00000473417 IFNAR1P17181 557 aa20.7■□□□□ 0.9
SNX4-204ENST00000473417 PSEN2P49810 448 aa20.7■□□□□ 0.9
SNX4-204ENST00000473417 NAPAP54920 295 aa20.7■□□□□ 0.9
SNX4-204ENST00000473417 MRPS9P82933 396 aaKnown RBP20.7■□□□□ 0.9
SNX4-204ENST00000473417 SCRN1Q12765 414 aa20.7■□□□□ 0.9
SNX4-204ENST00000473417 BFSP2Q13515 415 aa20.7■□□□□ 0.9
SNX4-204ENST00000473417 PFKFB3Q16875 520 aaPredicted RBP20.7■□□□□ 0.9
SNX4-204ENST00000473417 TYW1BQ6NUM6 668 aa20.7■□□□□ 0.9
SNX4-204ENST00000473417 USP17L6PQ6QN14 398 aa20.7■□□□□ 0.9
SNX4-204ENST00000473417 SMARCC2Q8TAQ2 1214 aa20.7■□□□□ 0.9
SNX4-204ENST00000473417 CUL5Q93034 780 aa20.7■□□□□ 0.9
SNX4-204ENST00000473417 ZFP91Q96JP5 570 aaPredicted RBP20.7■□□□□ 0.9
SNX4-204ENST00000473417 INPP4AQ96PE3 977 aaPredicted RBP20.7■□□□□ 0.9
SNX4-204ENST00000473417 BACH2Q9BYV9 841 aa20.7■□□□□ 0.9
SNX4-204ENST00000473417 PSTPIP2Q9H939 334 aa20.7■□□□□ 0.9
SNX4-204ENST00000473417 GTF2IRD1Q9UHL9 959 aa20.7■□□□□ 0.9
SNX4-204ENST00000473417 MEIS2O14770 477 aa20.69■□□□□ 0.9
SNX4-204ENST00000473417 PFKFB2O60825 505 aa20.69■□□□□ 0.9
SNX4-204ENST00000473417 SCG2P13521 617 aa20.69■□□□□ 0.9
SNX4-204ENST00000473417 MFSD10Q14728 455 aa20.69■□□□□ 0.9
SNX4-204ENST00000473417 GNPTABQ3T906 1256 aa20.69■□□□□ 0.9
SNX4-204ENST00000473417 DEFB128Q7Z7B8 93 aa20.69■□□□□ 0.9
SNX4-204ENST00000473417 CCDC155Q8N6L0 562 aa20.69■□□□□ 0.9
SNX4-204ENST00000473417 RETREG2Q8NC44 543 aa20.69■□□□□ 0.9
SNX4-204ENST00000473417 CAGE1Q8TC20 777 aa20.69■□□□□ 0.9
SNX4-204ENST00000473417 SPATA33Q96N06 139 aa20.69■□□□□ 0.9
SNX4-204ENST00000473417 RNF26Q9BY78 433 aaPredicted RBP20.69■□□□□ 0.9
SNX4-204ENST00000473417 HDAC6Q9UBN7 1215 aa20.69■□□□□ 0.9
SNX4-204ENST00000473417 SLC4A7Q9Y6M7 1214 aa20.69■□□□□ 0.9
SNX4-204ENST00000473417 KAT6AQ92794 2004 aa20.68■□□□□ 0.9
SNX4-204ENST00000473417 REV3LO60673 3130 aa20.68■□□□□ 0.9
SNX4-204ENST00000473417 STXBP3O00186 592 aa20.68■□□□□ 0.9
SNX4-204ENST00000473417 SORBS3O60504 671 aa20.68■□□□□ 0.9
SNX4-204ENST00000473417 PPFIA4O75335 1185 aa20.68■□□□□ 0.9
SNX4-204ENST00000473417 LARGE1O95461 756 aa20.68■□□□□ 0.9
SNX4-204ENST00000473417 ICAM3P32942 547 aa20.68■□□□□ 0.9
SNX4-204ENST00000473417 RBL2Q08999 1139 aa20.68■□□□□ 0.9
SNX4-204ENST00000473417 PKN1Q16512 942 aa20.68■□□□□ 0.9
SNX4-204ENST00000473417 ME3Q16798 604 aa20.68■□□□□ 0.9
SNX4-204ENST00000473417 KIAA0753Q2KHM9 967 aa20.68■□□□□ 0.9
SNX4-204ENST00000473417 CPLX2Q6PUV4 134 aaKnown RBP20.68■□□□□ 0.9
SNX4-204ENST00000473417 C7orf31Q8N865 590 aa20.68■□□□□ 0.9
SNX4-204ENST00000473417 NECAB1Q8N987 351 aa20.68■□□□□ 0.9
SNX4-204ENST00000473417 AFAP1L1Q8TED9 768 aa20.68■□□□□ 0.9
SNX4-204ENST00000473417 DHX38Q92620 1227 aaKnown RBP20.68■□□□□ 0.9
SNX4-204ENST00000473417 ALG1Q9BT22 464 aa20.68■□□□□ 0.9
SNX4-204ENST00000473417 BARHL2Q9NY43 387 aa20.68■□□□□ 0.9
SNX4-204ENST00000473417 MSRAQ9UJ68 235 aa20.68■□□□□ 0.9
SNX4-204ENST00000473417 MICAL3Q7RTP6 2002 aa20.67■□□□□ 0.9
SNX4-204ENST00000473417 ZBBXA8MT70 800 aa20.67■□□□□ 0.9
SNX4-204ENST00000473417 hCG_1984214I3L0E3 225 aa20.67■□□□□ 0.9
SNX4-204ENST00000473417 DTNBO60941 627 aa20.67■□□□□ 0.9
SNX4-204ENST00000473417 SSRP1Q08945 709 aaKnown RBP20.67■□□□□ 0.9
SNX4-204ENST00000473417 SEMA3FQ13275 785 aa20.67■□□□□ 0.9
SNX4-204ENST00000473417 UBE2SQ16763 222 aa20.67■□□□□ 0.9
SNX4-204ENST00000473417 TRIM22Q8IYM9 498 aa20.67■□□□□ 0.9
SNX4-204ENST00000473417 ZNF713Q8N859 430 aaPredicted RBP20.67■□□□□ 0.9
SNX4-204ENST00000473417 TBC1D32Q96NH3 1257 aa20.67■□□□□ 0.9
SNX4-204ENST00000473417 YBX2Q9Y2T7 364 aaKnown RBP20.67■□□□□ 0.9
SNX4-204ENST00000473417 SMCO2A6NFE2 343 aa20.66■□□□□ 0.9
SNX4-204ENST00000473417 FIBPO43427 364 aa20.66■□□□□ 0.9
SNX4-204ENST00000473417 ACTN1P12814 892 aa20.66■□□□□ 0.9
SNX4-204ENST00000473417 RABEP1Q15276 862 aa20.66■□□□□ 0.9
SNX4-204ENST00000473417 PCNX4Q63HM2 1172 aa20.66■□□□□ 0.9
SNX4-204ENST00000473417 PPP1R18Q6NYC8 613 aa20.66■□□□□ 0.9
SNX4-204ENST00000473417 C16orf70Q9BSU1 422 aa20.66■□□□□ 0.9
SNX4-204ENST00000473417 NKX2-4Q9H2Z4 354 aa20.66■□□□□ 0.9
SNX4-204ENST00000473417 MLXIPQ9HAP2 919 aa20.66■□□□□ 0.9
SNX4-204ENST00000473417 SIP14410 1827 aa20.65■□□□□ 0.9
SNX4-204ENST00000473417 SPATA31C2B4DYI2 1134 aa20.65■□□□□ 0.9
SNX4-204ENST00000473417 ATP2A2P16615 1042 aaKnown RBP20.65■□□□□ 0.9
SNX4-204ENST00000473417 ADCY7P51828 1080 aa20.65■□□□□ 0.9
SNX4-204ENST00000473417 XRRA1Q6P2D8 792 aa20.65■□□□□ 0.9
SNX4-204ENST00000473417 LRRC8DQ7L1W4 858 aa20.65■□□□□ 0.9
SNX4-204ENST00000473417 COL25A1Q9BXS0 654 aaPredicted RBP20.65■□□□□ 0.9
SNX4-204ENST00000473417 BCAS3Q9H6U6 928 aa20.65■□□□□ 0.9
SNX4-204ENST00000473417 LIMCH1Q9UPQ0 1083 aa20.65■□□□□ 0.9
SNX4-204ENST00000473417 VCANP13611 3396 aa20.65■□□□□ 0.9
SNX4-204ENST00000473417 COL4A4P53420 1690 aaPredicted RBP20.64■□□□□ 0.9
SNX4-204ENST00000473417 CDKL5O76039 1030 aa20.64■□□□□ 0.89
SNX4-204ENST00000473417 SELPP16109 830 aa20.64■□□□□ 0.89
SNX4-204ENST00000473417 RABGGTBP53611 331 aa20.64■□□□□ 0.89
SNX4-204ENST00000473417 PTK7Q13308 1070 aa20.64■□□□□ 0.89
SNX4-204ENST00000473417 NEDD9Q14511 834 aa20.64■□□□□ 0.89
SNX4-204ENST00000473417 METTL7BQ6UX53 244 aa20.64■□□□□ 0.89
SNX4-204ENST00000473417 SLC28A3Q9HAS3 691 aa20.64■□□□□ 0.89
SNX4-204ENST00000473417 RIC8AQ9NPQ8 531 aa20.64■□□□□ 0.89
SNX4-204ENST00000473417 RTEL1Q9NZ71 1219 aa20.64■□□□□ 0.89
SNX4-204ENST00000473417 PCDHA11Q9Y5I1 949 aa20.64■□□□□ 0.89
SNX4-204ENST00000473417 BAIAP3O94812 1187 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms