RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 ETNPPLQ8TBG4 499 aa19.02■□□□□ 0.64
CCM2-205ENST00000472223 SH3TC2Q8TF17 1288 aa19.02■□□□□ 0.64
CCM2-205ENST00000472223 SLC5A5Q92911 643 aa19.02■□□□□ 0.64
CCM2-205ENST00000472223 LENG9Q96B70 501 aa19.02■□□□□ 0.64
CCM2-205ENST00000472223 JPH1Q9HDC5 661 aaPredicted RBP19.02■□□□□ 0.64
CCM2-205ENST00000472223 KCNMB3Q9NPA1 279 aa19.02■□□□□ 0.64
CCM2-205ENST00000472223 SAMM50Q9Y512 469 aa19.02■□□□□ 0.64
CCM2-205ENST00000472223 STK24Q9Y6E0 443 aa19.02■□□□□ 0.64
CCM2-205ENST00000472223 GOLGA6L22H0YM25 854 aa19.01■□□□□ 0.63
CCM2-205ENST00000472223 WNT7AO00755 349 aa19.01■□□□□ 0.63
CCM2-205ENST00000472223 PPP6R2O75170 966 aa19.01■□□□□ 0.63
CCM2-205ENST00000472223 GGPS1O95749 300 aa19.01■□□□□ 0.63
CCM2-205ENST00000472223 ME1P48163 572 aa19.01■□□□□ 0.63
CCM2-205ENST00000472223 CCDC62Q6P9F0 684 aa19.01■□□□□ 0.63
CCM2-205ENST00000472223 CYFIP1Q7L576 1253 aa19.01■□□□□ 0.63
CCM2-205ENST00000472223 KRI1Q8N9T8 703 aaKnown RBP19.01■□□□□ 0.63
CCM2-205ENST00000472223 LINC00301Q8NCQ3 95 aa19.01■□□□□ 0.63
CCM2-205ENST00000472223 OR6J1Q8NGC5 347 aa19.01■□□□□ 0.63
CCM2-205ENST00000472223 MTMR9Q96QG7 549 aa19.01■□□□□ 0.63
CCM2-205ENST00000472223 UIMC1Q96RL1 719 aa19.01■□□□□ 0.63
CCM2-205ENST00000472223 TMEM60Q9H2L4 133 aa19.01■□□□□ 0.63
CCM2-205ENST00000472223 SLC9A2Q9UBY0 812 aa19.01■□□□□ 0.63
CCM2-205ENST00000472223 Q9Y3F1 56 aa19.01■□□□□ 0.63
CCM2-205ENST00000472223 DDX39AO00148 427 aaKnown RBP19■□□□□ 0.63
CCM2-205ENST00000472223 ATP9AO75110 1047 aa19■□□□□ 0.63
CCM2-205ENST00000472223 DUSP11O75319 330 aaKnown RBP19■□□□□ 0.63
CCM2-205ENST00000472223 KCNA2P16389 499 aa19■□□□□ 0.63
CCM2-205ENST00000472223 UBA1P22314 1058 aaKnown RBP19■□□□□ 0.63
CCM2-205ENST00000472223 MARCKSP29966 332 aaPredicted RBP19■□□□□ 0.63
CCM2-205ENST00000472223 SFNP31947 248 aa19■□□□□ 0.63
CCM2-205ENST00000472223 TECP42680 631 aa19■□□□□ 0.63
CCM2-205ENST00000472223 TRIM32Q13049 653 aa19■□□□□ 0.63
CCM2-205ENST00000472223 CELF3Q5SZQ8 465 aaKnown RBP19■□□□□ 0.63
CCM2-205ENST00000472223 MAP3K21Q5TCX8 1036 aa19■□□□□ 0.63
CCM2-205ENST00000472223 METTL7BQ6UX53 244 aa19■□□□□ 0.63
CCM2-205ENST00000472223 ERMNQ8TAM6 284 aa19■□□□□ 0.63
CCM2-205ENST00000472223 HAS1Q92839 578 aa19■□□□□ 0.63
CCM2-205ENST00000472223 SPATA33Q96N06 139 aa19■□□□□ 0.63
CCM2-205ENST00000472223 FTOQ9C0B1 505 aaKnown RBP eCLIP19■□□□□ 0.63
CCM2-205ENST00000472223 RCOR1Q9UKL0 485 aa19■□□□□ 0.63
CCM2-205ENST00000472223 TCHHQ07283 1943 aa19■□□□□ 0.63
CCM2-205ENST00000472223 VWA3AA6NCI4 1184 aa18.99■□□□□ 0.63
CCM2-205ENST00000472223 DYNC1LI2O43237 492 aaPredicted RBP18.99■□□□□ 0.63
CCM2-205ENST00000472223 ZEB2O60315 1214 aa18.99■□□□□ 0.63
CCM2-205ENST00000472223 SMPD1P17405 629 aa18.99■□□□□ 0.63
CCM2-205ENST00000472223 CCND3P30281 292 aaPredicted RBP18.99■□□□□ 0.63
CCM2-205ENST00000472223 JAK3P52333 1124 aa18.99■□□□□ 0.63
CCM2-205ENST00000472223 SEMA3FQ13275 785 aa18.99■□□□□ 0.63
CCM2-205ENST00000472223 PDIA5Q14554 519 aa18.99■□□□□ 0.63
CCM2-205ENST00000472223 PTPAQ15257 358 aa18.99■□□□□ 0.63
CCM2-205ENST00000472223 ZNF746Q6NUN9 644 aaPredicted RBP18.99■□□□□ 0.63
CCM2-205ENST00000472223 SMAP1Q8IYB5 467 aaPredicted RBP18.99■□□□□ 0.63
CCM2-205ENST00000472223 C4orf32Q8N8J7 132 aa18.99■□□□□ 0.63
CCM2-205ENST00000472223 DDX20Q9UHI6 824 aaKnown RBP18.99■□□□□ 0.63
CCM2-205ENST00000472223 SRPRBQ9Y5M8 271 aaKnown RBP18.99■□□□□ 0.63
CCM2-205ENST00000472223 MORC2Q9Y6X9 1032 aaPredicted RBP18.99■□□□□ 0.63
CCM2-205ENST00000472223 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.98■□□□□ 0.63
CCM2-205ENST00000472223 WDR64B1ANS9 1081 aa18.98■□□□□ 0.63
CCM2-205ENST00000472223 CHMP2AO43633 222 aa18.98■□□□□ 0.63
CCM2-205ENST00000472223 SORBS3O60504 671 aa18.98■□□□□ 0.63
CCM2-205ENST00000472223 PSMD10O75832 226 aa18.98■□□□□ 0.63
CCM2-205ENST00000472223 ARIH2O95376 493 aa18.98■□□□□ 0.63
CCM2-205ENST00000472223 LONP1P36776 959 aaKnown RBP18.98■□□□□ 0.63
CCM2-205ENST00000472223 TXLNAP40222 546 aa18.98■□□□□ 0.63
CCM2-205ENST00000472223 CPT1AP50416 773 aa18.98■□□□□ 0.63
CCM2-205ENST00000472223 FXR2P51116 673 aaKnown RBP eCLIP18.98■□□□□ 0.63
CCM2-205ENST00000472223 SP2Q02086 613 aa18.98■□□□□ 0.63
CCM2-205ENST00000472223 SP4Q02446 784 aa18.98■□□□□ 0.63
CCM2-205ENST00000472223 ITGB3BPQ13352 177 aaPredicted RBP18.98■□□□□ 0.63
CCM2-205ENST00000472223 NCAPH2Q6IBW4 605 aa18.98■□□□□ 0.63
CCM2-205ENST00000472223 MIS18BP1Q6P0N0 1132 aa18.98■□□□□ 0.63
CCM2-205ENST00000472223 MIER3Q7Z3K6 550 aa18.98■□□□□ 0.63
CCM2-205ENST00000472223 TLK2Q86UE8 772 aa18.98■□□□□ 0.63
CCM2-205ENST00000472223 TRPV1Q8NER1 839 aa18.98■□□□□ 0.63
CCM2-205ENST00000472223 RDM1Q8NG50 284 aa18.98■□□□□ 0.63
CCM2-205ENST00000472223 LEO1Q8WVC0 666 aaPredicted RBP18.98■□□□□ 0.63
CCM2-205ENST00000472223 AK8Q96MA6 479 aa18.98■□□□□ 0.63
CCM2-205ENST00000472223 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.98■□□□□ 0.63
CCM2-205ENST00000472223 RNF208Q9H0X6 261 aa18.98■□□□□ 0.63
CCM2-205ENST00000472223 LRWD1Q9UFC0 647 aa18.98■□□□□ 0.63
CCM2-205ENST00000472223 CUTAO60888 179 aa18.97■□□□□ 0.63
CCM2-205ENST00000472223 FARP2O94887 1054 aaPredicted RBP18.97■□□□□ 0.63
CCM2-205ENST00000472223 PSAPP07602 524 aa18.97■□□□□ 0.63
CCM2-205ENST00000472223 PPP2R5CQ13362 524 aa18.97■□□□□ 0.63
CCM2-205ENST00000472223 KRT79Q5XKE5 535 aa18.97■□□□□ 0.63
CCM2-205ENST00000472223 RASSF8Q8NHQ8 419 aa18.97■□□□□ 0.63
CCM2-205ENST00000472223 SEPT1Q8WYJ6 367 aa18.97■□□□□ 0.63
CCM2-205ENST00000472223 EMID1Q96A84 441 aaPredicted RBP18.97■□□□□ 0.63
CCM2-205ENST00000472223 XPNPEP3Q9NQH7 507 aa18.97■□□□□ 0.63
CCM2-205ENST00000472223 ELP1O95163 1332 aa18.97■□□□□ 0.63
CCM2-205ENST00000472223 DHX15O43143 795 aaKnown RBP18.96■□□□□ 0.63
CCM2-205ENST00000472223 DKC1O60832 514 aaKnown RBP eCLIP18.96■□□□□ 0.63
CCM2-205ENST00000472223 MYCP01106 439 aaPredicted RBP18.96■□□□□ 0.63
CCM2-205ENST00000472223 MYCNP04198 464 aaPredicted RBP18.96■□□□□ 0.63
CCM2-205ENST00000472223 CCL5P13501 91 aa18.96■□□□□ 0.63
CCM2-205ENST00000472223 UBA7P41226 1012 aa18.96■□□□□ 0.63
CCM2-205ENST00000472223 HAUS3Q68CZ6 603 aa18.96■□□□□ 0.63
CCM2-205ENST00000472223 RNF180Q86T96 592 aa18.96■□□□□ 0.63
CCM2-205ENST00000472223 PPTC7Q8NI37 304 aa18.96■□□□□ 0.63
CCM2-205ENST00000472223 COPS5Q92905 334 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms