RNA–Protein interactions for RNA: ENST00000472219.5

SNX21-209, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 1,858 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-209ENST00000472219 GMCL1P1Q8NEA9 526 aa23■■□□□ 1.27
SNX21-209ENST00000472219 BAP1Q92560 729 aa23■■□□□ 1.27
SNX21-209ENST00000472219 RUBCNQ92622 972 aa23■■□□□ 1.27
SNX21-209ENST00000472219 DNAJC18Q9H819 358 aa23■■□□□ 1.27
SNX21-209ENST00000472219 TFR2Q9UP52 801 aa23■■□□□ 1.27
SNX21-209ENST00000472219 RBM5P52756 815 aaKnown RBP eCLIP23■■□□□ 1.27
SNX21-209ENST00000472219 EDRF1Q3B7T1 1238 aa23■■□□□ 1.27
SNX21-209ENST00000472219 HERC4Q5GLZ8 1057 aaPredicted RBP23■■□□□ 1.27
SNX21-209ENST00000472219 TATDN1Q6P1N9 297 aa23■■□□□ 1.27
SNX21-209ENST00000472219 GMCL1Q96IK5 515 aa23■■□□□ 1.27
SNX21-209ENST00000472219 VIPAS39Q9H9C1 493 aa23■■□□□ 1.27
SNX21-209ENST00000472219 E9PMD0 336 aa22.99■■□□□ 1.27
SNX21-209ENST00000472219 ZNF263O14978 683 aa22.99■■□□□ 1.27
SNX21-209ENST00000472219 EPHB6O15197 1021 aa22.99■■□□□ 1.27
SNX21-209ENST00000472219 PJA2O43164 708 aa22.99■■□□□ 1.27
SNX21-209ENST00000472219 CASP8Q14790 479 aa22.99■■□□□ 1.27
SNX21-209ENST00000472219 SLC9C1Q4G0N8 1177 aa22.99■■□□□ 1.27
SNX21-209ENST00000472219 Q4G0T1 1027 aa22.99■■□□□ 1.27
SNX21-209ENST00000472219 KCTD17Q8N5Z5 321 aa22.99■■□□□ 1.27
SNX21-209ENST00000472219 CCDC155Q8N6L0 562 aa22.99■■□□□ 1.27
SNX21-209ENST00000472219 SERPINA10Q9UK55 444 aa22.99■■□□□ 1.27
SNX21-209ENST00000472219 SNX12Q9UMY4 172 aa22.99■■□□□ 1.27
SNX21-209ENST00000472219 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.99■■□□□ 1.27
SNX21-209ENST00000472219 POTEB3A0JP26 581 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 FRMD3A2A2Y4 597 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 SPDYE3A6NKU9 549 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 POTECB2RU33 542 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 PLEKP08567 350 aaPredicted RBP22.98■■□□□ 1.27
SNX21-209ENST00000472219 TCP1P17987 556 aaKnown RBP22.98■■□□□ 1.27
SNX21-209ENST00000472219 CYP11B2P19099 503 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 ARHGAP4P98171 946 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 TRAF1Q13077 416 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 POTEBQ6S5H4 581 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 RNF10Q8N5U6 811 aaKnown RBP22.98■■□□□ 1.27
SNX21-209ENST00000472219 EXOC4Q96A65 974 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 CAPZA3Q96KX2 299 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 PDE11AQ9HCR9 933 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 MED4Q9NPJ6 270 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 PSD3Q9NYI0 1048 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 TSKSQ9UJT2 592 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 SYNPO2Q9UMS6 1093 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 PCDHA2Q9Y5H9 948 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 SIPA1L1O43166 1804 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 NKRFO15226 690 aaKnown RBP eCLIP22.98■■□□□ 1.27
SNX21-209ENST00000472219 SRGAP2O75044 1071 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 EPS15P42566 896 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 MAGEA1P43355 309 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 TCP10Q12799 353 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 SFMBT2Q5VUG0 894 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 KRT26Q7Z3Y9 468 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 FBXO11Q86XK2 927 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 KIAA0825Q8IV33 1275 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 ZFPM1Q8IX07 1006 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 FAM20AQ96MK3 541 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 DBNDD1Q9H9R9 158 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 EMILIN3Q9NT22 766 aa22.98■■□□□ 1.27
SNX21-209ENST00000472219 COL11A2P13942 1736 aaPredicted RBP22.97■■□□□ 1.27
SNX21-209ENST00000472219 MEIS2O14770 477 aa22.97■■□□□ 1.27
SNX21-209ENST00000472219 SERPING1P05155 500 aa22.97■■□□□ 1.27
SNX21-209ENST00000472219 ZNF572Q7Z3I7 529 aaPredicted RBP22.97■■□□□ 1.27
SNX21-209ENST00000472219 TRIM59Q8IWR1 403 aa22.97■■□□□ 1.27
SNX21-209ENST00000472219 ZC3H3Q8IXZ2 948 aaKnown RBP22.97■■□□□ 1.27
SNX21-209ENST00000472219 GLIS3Q8NEA6 775 aa22.97■■□□□ 1.27
SNX21-209ENST00000472219 DNM3Q9UQ16 869 aa22.97■■□□□ 1.27
SNX21-209ENST00000472219 DUSP10Q9Y6W6 482 aa22.97■■□□□ 1.27
SNX21-209ENST00000472219 DDTLA6NHG4 134 aaPredicted RBP22.96■■□□□ 1.27
SNX21-209ENST00000472219 RBAK-RBAKDNI3L0D1 243 aa22.96■■□□□ 1.27
SNX21-209ENST00000472219 CETN3O15182 167 aa22.96■■□□□ 1.27
SNX21-209ENST00000472219 SLC12A3P55017 1021 aa22.96■■□□□ 1.27
SNX21-209ENST00000472219 ABCB5Q2M3G0 1257 aa22.96■■□□□ 1.27
SNX21-209ENST00000472219 CRYGNQ8WXF5 182 aa22.96■■□□□ 1.27
SNX21-209ENST00000472219 GJA10Q969M2 543 aa22.96■■□□□ 1.27
SNX21-209ENST00000472219 NOX5Q96PH1 765 aa22.96■■□□□ 1.27
SNX21-209ENST00000472219 CALCOCO1Q9P1Z2 691 aa22.96■■□□□ 1.27
SNX21-209ENST00000472219 FAM198AQ9UFP1 575 aa22.96■■□□□ 1.27
SNX21-209ENST00000472219 HYOU1Q9Y4L1 999 aa22.96■■□□□ 1.27
SNX21-209ENST00000472219 F5H6K3 240 aa22.96■■□□□ 1.27
SNX21-209ENST00000472219 SREBF1P36956 1147 aa22.96■■□□□ 1.27
SNX21-209ENST00000472219 KLRC3Q07444 240 aa22.96■■□□□ 1.27
SNX21-209ENST00000472219 TDRD12Q587J7 1177 aaKnown RBP22.96■■□□□ 1.27
SNX21-209ENST00000472219 DACT2Q5SW24 774 aa22.96■■□□□ 1.27
SNX21-209ENST00000472219 COL23A1Q86Y22 540 aaPredicted RBP22.96■■□□□ 1.27
SNX21-209ENST00000472219 ETNPPLQ8TBG4 499 aa22.96■■□□□ 1.27
SNX21-209ENST00000472219 FAM71BQ8TC56 605 aa22.96■■□□□ 1.27
SNX21-209ENST00000472219 ZNF622Q969S3 477 aaKnown RBP eCLIP22.96■■□□□ 1.27
SNX21-209ENST00000472219 MMP10P09238 476 aa22.95■■□□□ 1.26
SNX21-209ENST00000472219 RPA1P27694 616 aa22.95■■□□□ 1.26
SNX21-209ENST00000472219 MMP14P50281 582 aa22.95■■□□□ 1.26
SNX21-209ENST00000472219 KCNMA1Q12791 1236 aa22.95■■□□□ 1.26
SNX21-209ENST00000472219 IKQ13123 557 aaPredicted RBP22.95■■□□□ 1.26
SNX21-209ENST00000472219 ASTE1Q2TB18 679 aaPredicted RBP22.95■■□□□ 1.26
SNX21-209ENST00000472219 PRR16Q569H4 304 aa22.95■■□□□ 1.26
SNX21-209ENST00000472219 FAM83BQ5T0W9 1011 aa22.95■■□□□ 1.26
SNX21-209ENST00000472219 SYDE2Q5VT97 1194 aa22.95■■□□□ 1.26
SNX21-209ENST00000472219 SCFD1Q8WVM8 642 aa22.95■■□□□ 1.26
SNX21-209ENST00000472219 KCTD10Q9H3F6 313 aa22.95■■□□□ 1.26
SNX21-209ENST00000472219 ZCCHC17Q9NP64 241 aaKnown RBP22.95■■□□□ 1.26
SNX21-209ENST00000472219 H3BQF6 201 aa22.94■■□□□ 1.26
SNX21-209ENST00000472219 MED24O75448 989 aa22.94■■□□□ 1.26
SNX21-209ENST00000472219 ADAM9Q13443 819 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms