RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 NLRP5P59047 1200 aa9.55□□□□□ -0.88
TSPAN1-205ENST00000472170 CCT2P78371 535 aaKnown RBP9.55□□□□□ -0.88
TSPAN1-205ENST00000472170 MRPS9P82933 396 aaKnown RBP9.55□□□□□ -0.88
TSPAN1-205ENST00000472170 SP4Q02446 784 aa9.55□□□□□ -0.88
TSPAN1-205ENST00000472170 PTK7Q13308 1070 aa9.55□□□□□ -0.88
TSPAN1-205ENST00000472170 UBE2SQ16763 222 aa9.55□□□□□ -0.88
TSPAN1-205ENST00000472170 HSDL1Q3SXM5 330 aa9.55□□□□□ -0.88
TSPAN1-205ENST00000472170 C9orf50Q5SZB4 431 aa9.55□□□□□ -0.88
TSPAN1-205ENST00000472170 UTP14CQ5TAP6 766 aaKnown RBP9.55□□□□□ -0.88
TSPAN1-205ENST00000472170 RSPH3Q86UC2 560 aa9.55□□□□□ -0.88
TSPAN1-205ENST00000472170 FAM177A1Q8N128 213 aaPredicted RBP9.55□□□□□ -0.88
TSPAN1-205ENST00000472170 REXO1Q8N1G1 1221 aaKnown RBP9.55□□□□□ -0.88
TSPAN1-205ENST00000472170 AFAP1L1Q8TED9 768 aa9.55□□□□□ -0.88
TSPAN1-205ENST00000472170 WASF1Q92558 559 aa9.55□□□□□ -0.88
TSPAN1-205ENST00000472170 MXRA8Q9BRK3 442 aa9.55□□□□□ -0.88
TSPAN1-205ENST00000472170 NOC4LQ9BVI4 516 aaKnown RBP9.55□□□□□ -0.88
TSPAN1-205ENST00000472170 SLKQ9H2G2 1235 aaPredicted RBP9.55□□□□□ -0.88
TSPAN1-205ENST00000472170 SMARCAD1Q9H4L7 1026 aa9.55□□□□□ -0.88
TSPAN1-205ENST00000472170 JADE2Q9NQC1 790 aa9.55□□□□□ -0.88
TSPAN1-205ENST00000472170 SH3GLB2Q9NR46 395 aa9.55□□□□□ -0.88
TSPAN1-205ENST00000472170 HDAC6Q9UBN7 1215 aa9.55□□□□□ -0.88
TSPAN1-205ENST00000472170 GTF2IRD1Q9UHL9 959 aa9.55□□□□□ -0.88
TSPAN1-205ENST00000472170 SLC4A7Q9Y6M7 1214 aa9.55□□□□□ -0.88
TSPAN1-205ENST00000472170 GRIN2DO15399 1336 aa9.55□□□□□ -0.88
TSPAN1-205ENST00000472170 FRMPD4Q14CM0 1322 aa9.55□□□□□ -0.88
TSPAN1-205ENST00000472170 CNTNAP5Q8WYK1 1306 aa9.55□□□□□ -0.88
TSPAN1-205ENST00000472170 LRRC37A2A6NM11 1700 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 TMEM265A0A087WTH1 108 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 ESYT2A0FGR8 921 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 STXBP3O00186 592 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 DEXIO95424 95 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 F2P00734 622 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 RPLP2P05387 115 aaKnown RBP9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 IQCF3P0C7M6 154 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 ZNF286BP0CG31 522 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 PTGS1P23219 599 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 ITGB8P26012 769 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 CDC27P30260 824 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 KCNJ6P48051 423 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 EVCP57679 992 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 SP2Q02086 613 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 RAB30Q15771 203 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 CEP55Q53EZ4 464 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 TMEM240Q5SV17 173 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 JAKMIP3Q5VZ66 844 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 GALNT17Q6IS24 598 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 DEFB128Q7Z7B8 93 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 IL31RAQ8NI17 732 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 HERVK_113Q902F9 699 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 ATP6V0A1Q93050 837 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 ANO3Q9BYT9 981 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 AGXT2Q9BYV1 514 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 ZMYND12Q9H0C1 365 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 ERAP1Q9NZ08 941 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 UBIAD1Q9Y5Z9 338 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 LAMA3Q16787 3333 aa9.54□□□□□ -0.88
TSPAN1-205ENST00000472170 SOX1O00570 391 aaPredicted RBP9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 EFCAB14O75071 495 aa9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 LGALS2P05162 132 aa9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 HOXD8P13378 290 aaPredicted RBP9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 SELPP16109 830 aa9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 TCF7P36402 384 aaPredicted RBP9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 STK3Q13188 491 aa9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 FAM160B1Q5W0V3 765 aa9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 GDF6Q6KF10 455 aaPredicted RBP9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 NIPA1Q7RTP0 329 aa9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 OTOP2Q7RTS6 562 aa9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 PLA2G4DQ86XP0 818 aa9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 KAT2BQ92831 832 aa9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 PHKBQ93100 1093 aa9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 GPR20Q99678 358 aa9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 UPF3BQ9BZI7 483 aaKnown RBP9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 SLC28A3Q9HAS3 691 aa9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 UPF2Q9HAU5 1272 aaKnown RBP9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 JPH1Q9HDC5 661 aaPredicted RBP9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 KCNH7Q9NS40 1196 aa9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 FAM217BQ9NTX9 383 aaPredicted RBP9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 TBC1D22BQ9NU19 505 aa9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 PKD2L1Q9P0L9 805 aa9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 SLC9A2Q9UBY0 812 aa9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 TRIP12Q14669 1992 aaPredicted RBP9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 SCN10AQ9Y5Y9 1956 aa9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 EMSYQ7Z589 1322 aa9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 NRCAMQ92823 1304 aa9.53□□□□□ -0.88
TSPAN1-205ENST00000472170 LTBP2Q14767 1821 aa9.52□□□□□ -0.89
TSPAN1-205ENST00000472170 RRN3P2A6NIE6 340 aa9.52□□□□□ -0.89
TSPAN1-205ENST00000472170 M0QZ92 97 aa9.52□□□□□ -0.89
TSPAN1-205ENST00000472170 HAS3O00219 553 aa9.52□□□□□ -0.89
TSPAN1-205ENST00000472170 MARCH6O60337 910 aa9.52□□□□□ -0.89
TSPAN1-205ENST00000472170 CAND2O75155 1236 aa9.52□□□□□ -0.89
TSPAN1-205ENST00000472170 BAIAP3O94812 1187 aa9.52□□□□□ -0.89
TSPAN1-205ENST00000472170 ITGB5P18084 799 aa9.52□□□□□ -0.89
TSPAN1-205ENST00000472170 SREBF1P36956 1147 aa9.52□□□□□ -0.89
TSPAN1-205ENST00000472170 THPOP40225 353 aa9.52□□□□□ -0.89
TSPAN1-205ENST00000472170 SLC26A2P50443 739 aa9.52□□□□□ -0.89
TSPAN1-205ENST00000472170 USP11P51784 963 aa9.52□□□□□ -0.89
TSPAN1-205ENST00000472170 ARHGAP4P98171 946 aa9.52□□□□□ -0.89
TSPAN1-205ENST00000472170 SETQ01105 290 aaPredicted RBP9.52□□□□□ -0.89
TSPAN1-205ENST00000472170 FUT2Q10981 343 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms