RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 ITGB5P18084 799 aa16.91■□□□□ 0.3
SSR4-208ENST00000471880 ANAPC15P60006 121 aa16.91■□□□□ 0.3
SSR4-208ENST00000471880 PTPN11Q06124 597 aaPredicted RBP16.91■□□□□ 0.3
SSR4-208ENST00000471880 AP3B2Q13367 1082 aa16.91■□□□□ 0.3
SSR4-208ENST00000471880 GDF6Q6KF10 455 aaPredicted RBP16.91■□□□□ 0.3
SSR4-208ENST00000471880 METTL7BQ6UX53 244 aa16.91■□□□□ 0.3
SSR4-208ENST00000471880 Q7L0L9 218 aa16.91■□□□□ 0.3
SSR4-208ENST00000471880 REXO1Q8N1G1 1221 aaKnown RBP16.91■□□□□ 0.3
SSR4-208ENST00000471880 GIMAP8Q8ND71 665 aaPredicted RBP16.91■□□□□ 0.3
SSR4-208ENST00000471880 KAT2BQ92831 832 aa16.91■□□□□ 0.3
SSR4-208ENST00000471880 HDAC6Q9UBN7 1215 aa16.91■□□□□ 0.3
SSR4-208ENST00000471880 F2P00734 622 aa16.9■□□□□ 0.3
SSR4-208ENST00000471880 LGALS2P05162 132 aa16.9■□□□□ 0.3
SSR4-208ENST00000471880 GNA11P29992 359 aa16.9■□□□□ 0.3
SSR4-208ENST00000471880 AK2P54819 239 aa16.9■□□□□ 0.3
SSR4-208ENST00000471880 ANKRD1Q15327 319 aa16.9■□□□□ 0.3
SSR4-208ENST00000471880 NTRK3Q16288 839 aa16.9■□□□□ 0.3
SSR4-208ENST00000471880 PKN1Q16512 942 aa16.9■□□□□ 0.3
SSR4-208ENST00000471880 C16orf59Q7L2K0 433 aa16.9■□□□□ 0.3
SSR4-208ENST00000471880 DEFB128Q7Z7B8 93 aa16.9■□□□□ 0.3
SSR4-208ENST00000471880 CCDC155Q8N6L0 562 aa16.9■□□□□ 0.3
SSR4-208ENST00000471880 BICD2Q8TD16 824 aa16.9■□□□□ 0.3
SSR4-208ENST00000471880 RASGRP4Q8TDF6 673 aa16.9■□□□□ 0.3
SSR4-208ENST00000471880 UIMC1Q96RL1 719 aa16.9■□□□□ 0.3
SSR4-208ENST00000471880 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.9■□□□□ 0.32e-8■□□□□ 8.3
SSR4-208ENST00000471880 MXRA8Q9BRK3 442 aa16.9■□□□□ 0.3
SSR4-208ENST00000471880 JADE2Q9NQC1 790 aa16.9■□□□□ 0.3
SSR4-208ENST00000471880 UBIAD1Q9Y5Z9 338 aa16.9■□□□□ 0.3
SSR4-208ENST00000471880 H3BRB1 525 aa16.89■□□□□ 0.29
SSR4-208ENST00000471880 DTNBO60941 627 aa16.89■□□□□ 0.29
SSR4-208ENST00000471880 ATP9AO75110 1047 aa16.89■□□□□ 0.29
SSR4-208ENST00000471880 CDKL5O76039 1030 aa16.89■□□□□ 0.29
SSR4-208ENST00000471880 NEK4P51957 841 aa16.89■□□□□ 0.29
SSR4-208ENST00000471880 EVCP57679 992 aa16.89■□□□□ 0.29
SSR4-208ENST00000471880 ARHGAP4P98171 946 aa16.89■□□□□ 0.29
SSR4-208ENST00000471880 BFSP2Q13515 415 aa16.89■□□□□ 0.29
SSR4-208ENST00000471880 PSRC1Q6PGN9 363 aaPredicted RBP16.89■□□□□ 0.29
SSR4-208ENST00000471880 TRIM50Q86XT4 487 aa16.89■□□□□ 0.29
SSR4-208ENST00000471880 VWCEQ96DN2 955 aa16.89■□□□□ 0.29
SSR4-208ENST00000471880 GPR20Q99678 358 aa16.89■□□□□ 0.29
SSR4-208ENST00000471880 SENP7Q9BQF6 1050 aa16.89■□□□□ 0.29
SSR4-208ENST00000471880 SDF4Q9BRK5 362 aa16.89■□□□□ 0.29
SSR4-208ENST00000471880 ZMYND12Q9H0C1 365 aa16.89■□□□□ 0.29
SSR4-208ENST00000471880 WNT8AQ9H1J5 351 aa16.89■□□□□ 0.29
SSR4-208ENST00000471880 TUT1Q9H6E5 874 aaKnown RBP16.89■□□□□ 0.29
SSR4-208ENST00000471880 IL23AQ9NPF7 189 aa16.89■□□□□ 0.29
SSR4-208ENST00000471880 ZNF215Q9UL58 517 aaPredicted RBP16.89■□□□□ 0.29
SSR4-208ENST00000471880 PTPRSQ13332 1948 aa16.89■□□□□ 0.29
SSR4-208ENST00000471880 COL6A3P12111 3177 aa16.88■□□□□ 0.29
SSR4-208ENST00000471880 ZBBXA8MT70 800 aa16.88■□□□□ 0.29
SSR4-208ENST00000471880 DDX39AO00148 427 aaKnown RBP16.88■□□□□ 0.29
SSR4-208ENST00000471880 DEXIO95424 95 aa16.88■□□□□ 0.29
SSR4-208ENST00000471880 TCF7P36402 384 aaPredicted RBP16.88■□□□□ 0.29
SSR4-208ENST00000471880 SREBF1P36956 1147 aa16.88■□□□□ 0.29
SSR4-208ENST00000471880 ZNF365Q70YC5 407 aa16.88■□□□□ 0.29
SSR4-208ENST00000471880 OTOP2Q7RTS6 562 aa16.88■□□□□ 0.29
SSR4-208ENST00000471880 CYP2W1Q8TAV3 490 aa16.88■□□□□ 0.29
SSR4-208ENST00000471880 GLG1Q92896 1179 aa16.88■□□□□ 0.29
SSR4-208ENST00000471880 FAM161BQ96MY7 647 aa16.88■□□□□ 0.29
SSR4-208ENST00000471880 FTOQ9C0B1 505 aaKnown RBP eCLIP16.88■□□□□ 0.29
SSR4-208ENST00000471880 KCNH7Q9NS40 1196 aa16.88■□□□□ 0.29
SSR4-208ENST00000471880 GTF2IRD1Q9UHL9 959 aa16.88■□□□□ 0.29
SSR4-208ENST00000471880 TPCN1Q9ULQ1 816 aa16.88■□□□□ 0.29
SSR4-208ENST00000471880 TELO2Q9Y4R8 837 aa16.88■□□□□ 0.29
SSR4-208ENST00000471880 ESYT2A0FGR8 921 aa16.87■□□□□ 0.29
SSR4-208ENST00000471880 C17orf102A2RUQ5 167 aa16.87■□□□□ 0.29
SSR4-208ENST00000471880 FGBP02675 491 aa16.87■□□□□ 0.29
SSR4-208ENST00000471880 ARP10275 920 aa16.87■□□□□ 0.29
SSR4-208ENST00000471880 KCNA2P16389 499 aa16.87■□□□□ 0.29
SSR4-208ENST00000471880 MARK3P27448 753 aa16.87■□□□□ 0.29
SSR4-208ENST00000471880 CLK2P49760 499 aaKnown RBP16.87■□□□□ 0.29
SSR4-208ENST00000471880 ZNF200P98182 395 aaPredicted RBP16.87■□□□□ 0.29
SSR4-208ENST00000471880 SCRN1Q12765 414 aa16.87■□□□□ 0.29
SSR4-208ENST00000471880 CEP55Q53EZ4 464 aa16.87■□□□□ 0.29
SSR4-208ENST00000471880 TMEM240Q5SV17 173 aa16.87■□□□□ 0.29
SSR4-208ENST00000471880 MCTP2Q6DN12 878 aa16.87■□□□□ 0.29
SSR4-208ENST00000471880 PLA2G4DQ86XP0 818 aa16.87■□□□□ 0.29
SSR4-208ENST00000471880 RPUSD2Q8IZ73 545 aaKnown RBP16.87■□□□□ 0.29
SSR4-208ENST00000471880 DEFB123Q8N688 67 aa16.87■□□□□ 0.29
SSR4-208ENST00000471880 CTAGE1Q96RT6 745 aa16.87■□□□□ 0.29
SSR4-208ENST00000471880 C16orf70Q9BSU1 422 aa16.87■□□□□ 0.29
SSR4-208ENST00000471880 MTIF3Q9H2K0 278 aaKnown RBP16.87■□□□□ 0.29
SSR4-208ENST00000471880 TCEAL9Q9UHQ7 104 aa16.87■□□□□ 0.29
SSR4-208ENST00000471880 KAT6AQ92794 2004 aa16.87■□□□□ 0.29
SSR4-208ENST00000471880 HAS3O00219 553 aa16.86■□□□□ 0.29
SSR4-208ENST00000471880 ADAMTS3O15072 1205 aa16.86■□□□□ 0.29
SSR4-208ENST00000471880 MAFGO15525 162 aa16.86■□□□□ 0.29
SSR4-208ENST00000471880 SMIM10L2AP0DMW4 78 aa16.86■□□□□ 0.29
SSR4-208ENST00000471880 SMIM10L2BP0DMW5 78 aa16.86■□□□□ 0.29
SSR4-208ENST00000471880 SESTD1Q86VW0 696 aa16.86■□□□□ 0.29
SSR4-208ENST00000471880 TEX2Q8IWB9 1127 aa16.86■□□□□ 0.29
SSR4-208ENST00000471880 NECAB1Q8N987 351 aa16.86■□□□□ 0.29
SSR4-208ENST00000471880 SEPT1Q8WYJ6 367 aa16.86■□□□□ 0.29
SSR4-208ENST00000471880 ATP6V0A1Q93050 837 aa16.86■□□□□ 0.29
SSR4-208ENST00000471880 AIFM3Q96NN9 605 aa16.86■□□□□ 0.29
SSR4-208ENST00000471880 JPH1Q9HDC5 661 aaPredicted RBP16.86■□□□□ 0.29
SSR4-208ENST00000471880 SLC9A2Q9UBY0 812 aa16.86■□□□□ 0.29
SSR4-208ENST00000471880 WDR81Q562E7 1941 aa16.86■□□□□ 0.29
SSR4-208ENST00000471880 HOXD8P13378 290 aaPredicted RBP16.85■□□□□ 0.29
SSR4-208ENST00000471880 FOSBP53539 338 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms