RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 KRIT1O00522 736 aa5□□□□□ -1.61
COPS3-206ENST00000471414 CELA3BP08861 270 aa5□□□□□ -1.61
COPS3-206ENST00000471414 COL6A1P12109 1028 aa5□□□□□ -1.61
COPS3-206ENST00000471414 RASA3Q14644 834 aa5□□□□□ -1.61
COPS3-206ENST00000471414 RGL3Q3MIN7 710 aa5□□□□□ -1.61
COPS3-206ENST00000471414 LRP10Q7Z4F1 713 aa5□□□□□ -1.61
COPS3-206ENST00000471414 STK32CQ86UX6 486 aa5□□□□□ -1.61
COPS3-206ENST00000471414 TRIM48Q8IWZ4 208 aa5□□□□□ -1.61
COPS3-206ENST00000471414 IFNL3Q8IZI9 196 aa5□□□□□ -1.61
COPS3-206ENST00000471414 ZBTB38Q8NAP3 1195 aaPredicted RBP5□□□□□ -1.61
COPS3-206ENST00000471414 MBD6Q96DN6 1003 aa5□□□□□ -1.61
COPS3-206ENST00000471414 YTHDC1Q96MU7 727 aaKnown RBP5□□□□□ -1.61
COPS3-206ENST00000471414 TMEM209Q96SK2 561 aa5□□□□□ -1.61
COPS3-206ENST00000471414 SSBP3Q9BWW4 388 aaPredicted RBP5□□□□□ -1.61
COPS3-206ENST00000471414 USP40Q9NVE5 1235 aa5□□□□□ -1.61
COPS3-206ENST00000471414 SIRPGQ9P1W8 387 aa5□□□□□ -1.61
COPS3-206ENST00000471414 TELO2Q9Y4R8 837 aa5□□□□□ -1.61
COPS3-206ENST00000471414 C9orf118A6NHY6 69 aa4.99□□□□□ -1.61
COPS3-206ENST00000471414 NKRFO15226 690 aaKnown RBP eCLIP4.99□□□□□ -1.61
COPS3-206ENST00000471414 DIAPH1O60610 1272 aaKnown RBP4.99□□□□□ -1.61
COPS3-206ENST00000471414 MAFKO60675 156 aa4.99□□□□□ -1.61
COPS3-206ENST00000471414 ATP2B1P20020 1258 aa4.99□□□□□ -1.61
COPS3-206ENST00000471414 IFRD2Q12894 506 aaPredicted RBP4.99□□□□□ -1.61
COPS3-206ENST00000471414 LONRF2Q1L5Z9 754 aa4.99□□□□□ -1.61
COPS3-206ENST00000471414 FOXB2Q5VYV0 432 aa4.99□□□□□ -1.61
COPS3-206ENST00000471414 PKN3Q6P5Z2 889 aa4.99□□□□□ -1.61
COPS3-206ENST00000471414 FERMT3Q86UX7 667 aa4.99□□□□□ -1.61
COPS3-206ENST00000471414 SCUBE1Q8IWY4 988 aa4.99□□□□□ -1.61
COPS3-206ENST00000471414 JMYQ8N9B5 988 aa4.99□□□□□ -1.61
COPS3-206ENST00000471414 DTX3Q8N9I9 347 aa4.99□□□□□ -1.61
COPS3-206ENST00000471414 TXNDC5Q8NBS9 432 aaKnown RBP4.99□□□□□ -1.61
COPS3-206ENST00000471414 ZCCHC14Q8WYQ9 949 aaKnown RBP4.99□□□□□ -1.61
COPS3-206ENST00000471414 EXOC2Q96KP1 924 aa4.99□□□□□ -1.61
COPS3-206ENST00000471414 TANGO6Q9C0B7 1094 aa4.99□□□□□ -1.61
COPS3-206ENST00000471414 MROH6A6NGR9 719 aa4.98□□□□□ -1.61
COPS3-206ENST00000471414 SLC27A2O14975 620 aa4.98□□□□□ -1.61
COPS3-206ENST00000471414 SOD2P04179 222 aa4.98□□□□□ -1.61
COPS3-206ENST00000471414 ITGB3P05106 788 aa4.98□□□□□ -1.61
COPS3-206ENST00000471414 CNR2P34972 360 aa4.98□□□□□ -1.61
COPS3-206ENST00000471414 MLLT6P55198 1093 aaPredicted RBP4.98□□□□□ -1.61
COPS3-206ENST00000471414 UBXN11Q5T124 520 aa4.98□□□□□ -1.61
COPS3-206ENST00000471414 MAMDC2Q7Z304 686 aaPredicted RBP4.98□□□□□ -1.61
COPS3-206ENST00000471414 SH3RF2Q8TEC5 729 aa4.98□□□□□ -1.61
COPS3-206ENST00000471414 BDH2Q9BUT1 245 aa4.98□□□□□ -1.61
COPS3-206ENST00000471414 RBPJLQ9UBG7 517 aa4.98□□□□□ -1.61
COPS3-206ENST00000471414 TCRBV5S4A2TA0A5A2 114 aa4.97□□□□□ -1.61
COPS3-206ENST00000471414 ARVCFO00192 962 aa4.97□□□□□ -1.61
COPS3-206ENST00000471414 DDX3XO00571 662 aaKnown RBP eCLIP4.97□□□□□ -1.61
COPS3-206ENST00000471414 PLATP00750 562 aa4.97□□□□□ -1.61
COPS3-206ENST00000471414 FAHP16930 419 aa4.97□□□□□ -1.61
COPS3-206ENST00000471414 SUMO1P63165 101 aaKnown RBP4.97□□□□□ -1.61
COPS3-206ENST00000471414 SPIRE1Q08AE8 756 aa4.97□□□□□ -1.61
COPS3-206ENST00000471414 TUSC3Q13454 348 aa4.97□□□□□ -1.61
COPS3-206ENST00000471414 MTERF2Q49AM1 385 aa4.97□□□□□ -1.61
COPS3-206ENST00000471414 ERICH6BQ5W0A0 696 aa4.97□□□□□ -1.61
COPS3-206ENST00000471414 MCTP2Q6DN12 878 aa4.97□□□□□ -1.61
COPS3-206ENST00000471414 DPH6Q7L8W6 267 aa4.97□□□□□ -1.61
COPS3-206ENST00000471414 PRRT2Q7Z6L0 340 aaPredicted RBP4.97□□□□□ -1.61
COPS3-206ENST00000471414 DDX1Q92499 740 aaKnown RBP4.97□□□□□ -1.61
COPS3-206ENST00000471414 PTPRN2Q92932 1015 aa4.97□□□□□ -1.61
COPS3-206ENST00000471414 KISS1RQ969F8 398 aaPredicted RBP4.97□□□□□ -1.61
COPS3-206ENST00000471414 CLIC6Q96NY7 704 aa4.97□□□□□ -1.61
COPS3-206ENST00000471414 WRNIP1Q96S55 665 aa4.97□□□□□ -1.61
COPS3-206ENST00000471414 YIPF4Q9BSR8 244 aa4.97□□□□□ -1.61
COPS3-206ENST00000471414 HIRIP3Q9BW71 556 aaPredicted RBP4.97□□□□□ -1.61
COPS3-206ENST00000471414 KRTAP3-1Q9BYR8 98 aa4.97□□□□□ -1.61
COPS3-206ENST00000471414 IPPKQ9H8X2 491 aa4.97□□□□□ -1.61
COPS3-206ENST00000471414 TRAF6Q9Y4K3 522 aa4.97□□□□□ -1.61
COPS3-206ENST00000471414 TRBV23-1A0A0A0MS06 115 aa4.96□□□□□ -1.62
COPS3-206ENST00000471414 FAM47E-STBD1D6RA91 191 aa4.96□□□□□ -1.62
COPS3-206ENST00000471414 U2SURPO15042 1029 aaKnown RBP4.96□□□□□ -1.62
COPS3-206ENST00000471414 B4GALT3O60512 393 aa4.96□□□□□ -1.62
COPS3-206ENST00000471414 LTFP02788 710 aa4.96□□□□□ -1.62
COPS3-206ENST00000471414 FAM153BP0C7A2 387 aa4.96□□□□□ -1.62
COPS3-206ENST00000471414 GNAT1P11488 350 aa4.96□□□□□ -1.62
COPS3-206ENST00000471414 COL6A2P12110 1019 aa4.96□□□□□ -1.62
COPS3-206ENST00000471414 IL13P35225 146 aa4.96□□□□□ -1.62
COPS3-206ENST00000471414 SSRP1Q08945 709 aaKnown RBP4.96□□□□□ -1.62
COPS3-206ENST00000471414 KIAA2012Q0VF49 1180 aa4.96□□□□□ -1.62
COPS3-206ENST00000471414 SPATS1Q496A3 300 aa4.96□□□□□ -1.62
COPS3-206ENST00000471414 TBC1D10BQ4KMP7 808 aaPredicted RBP4.96□□□□□ -1.62
COPS3-206ENST00000471414 PAN2Q504Q3 1202 aaKnown RBP4.96□□□□□ -1.62
COPS3-206ENST00000471414 FAM209AQ5JX71 171 aa4.96□□□□□ -1.62
COPS3-206ENST00000471414 ZSWIM3Q96MP5 696 aa4.96□□□□□ -1.62
COPS3-206ENST00000471414 DLL4Q9NR61 685 aa4.96□□□□□ -1.62
COPS3-206ENST00000471414 DSEQ9UL01 958 aa4.96□□□□□ -1.62
COPS3-206ENST00000471414 FAM221BA6H8Z2 402 aa4.95□□□□□ -1.62
COPS3-206ENST00000471414 ACOT7O00154 380 aa4.95□□□□□ -1.62
COPS3-206ENST00000471414 AQP7O14520 342 aa4.95□□□□□ -1.62
COPS3-206ENST00000471414 CYP7B1O75881 506 aa4.95□□□□□ -1.62
COPS3-206ENST00000471414 KLHL18O94889 574 aa4.95□□□□□ -1.62
COPS3-206ENST00000471414 CHGBP05060 677 aa4.95□□□□□ -1.62
COPS3-206ENST00000471414 ADRB1P08588 477 aa4.95□□□□□ -1.62
COPS3-206ENST00000471414 PLP2Q04941 152 aa4.95□□□□□ -1.62
COPS3-206ENST00000471414 CD276Q5ZPR3 534 aa4.95□□□□□ -1.62
COPS3-206ENST00000471414 HHIPL2Q6UWX4 724 aa4.95□□□□□ -1.62
COPS3-206ENST00000471414 TMC5Q6UXY8 1006 aa4.95□□□□□ -1.62
COPS3-206ENST00000471414 KCTD1Q719H9 257 aa4.95□□□□□ -1.62
COPS3-206ENST00000471414 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.95□□□□□ -1.62
COPS3-206ENST00000471414 RBM12BQ8IXT5 1001 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms