RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 KRT85P78386 507 aa11.2□□□□□ -0.62
SF3A1-207ENST00000471342 ACVR2BQ13705 512 aa11.2□□□□□ -0.62
SF3A1-207ENST00000471342 HYIQ5T013 277 aa11.2□□□□□ -0.62
SF3A1-207ENST00000471342 RESP18Q5W5W9 173 aa11.2□□□□□ -0.62
SF3A1-207ENST00000471342 ADALQ6DHV7 355 aa11.2□□□□□ -0.62
SF3A1-207ENST00000471342 ABHD15Q6UXT9 468 aa11.2□□□□□ -0.62
SF3A1-207ENST00000471342 DPP9Q86TI2 863 aa11.2□□□□□ -0.62
SF3A1-207ENST00000471342 RIT2Q99578 217 aa11.2□□□□□ -0.62
SF3A1-207ENST00000471342 ADD3Q9UEY8 706 aaKnown RBP11.2□□□□□ -0.62
SF3A1-207ENST00000471342 NOL7Q9UMY1 257 aaKnown RBP11.2□□□□□ -0.62
SF3A1-207ENST00000471342 PTPN22Q9Y2R2 807 aa11.2□□□□□ -0.62
SF3A1-207ENST00000471342 PTCH2Q9Y6C5 1203 aa11.2□□□□□ -0.62
SF3A1-207ENST00000471342 TCHHQ07283 1943 aa11.19□□□□□ -0.62
SF3A1-207ENST00000471342 POTEMA6NI47 508 aa11.19□□□□□ -0.62
SF3A1-207ENST00000471342 ASB14A6NK59 587 aa11.19□□□□□ -0.62
SF3A1-207ENST00000471342 LAD1O00515 517 aa11.19□□□□□ -0.62
SF3A1-207ENST00000471342 MAFGO15525 162 aa11.19□□□□□ -0.62
SF3A1-207ENST00000471342 ZNF862O60290 1169 aa11.19□□□□□ -0.62
SF3A1-207ENST00000471342 PRPF40AO75400 957 aaKnown RBP11.19□□□□□ -0.62
SF3A1-207ENST00000471342 MED24O75448 989 aa11.19□□□□□ -0.62
SF3A1-207ENST00000471342 SLITRK3O94933 977 aa11.19□□□□□ -0.62
SF3A1-207ENST00000471342 GNRH1P01148 92 aa11.19□□□□□ -0.62
SF3A1-207ENST00000471342 TGFB3P10600 412 aa11.19□□□□□ -0.62
SF3A1-207ENST00000471342 CMA1P23946 247 aa11.19□□□□□ -0.62
SF3A1-207ENST00000471342 CCND3P30281 292 aaPredicted RBP11.19□□□□□ -0.62
SF3A1-207ENST00000471342 MNX1P50219 401 aaPredicted RBP11.19□□□□□ -0.62
SF3A1-207ENST00000471342 GRB10Q13322 594 aa11.19□□□□□ -0.62
SF3A1-207ENST00000471342 MTMR1Q13613 665 aa11.19□□□□□ -0.62
SF3A1-207ENST00000471342 PDIA5Q14554 519 aa11.19□□□□□ -0.62
SF3A1-207ENST00000471342 CALCRLQ16602 461 aa11.19□□□□□ -0.62
SF3A1-207ENST00000471342 UGCGQ16739 394 aa11.19□□□□□ -0.62
SF3A1-207ENST00000471342 HSDL1Q3SXM5 330 aa11.19□□□□□ -0.62
SF3A1-207ENST00000471342 LHX8Q68G74 356 aa11.19□□□□□ -0.62
SF3A1-207ENST00000471342 FMR1NBQ8N0W7 255 aaPredicted RBP11.19□□□□□ -0.62
SF3A1-207ENST00000471342 PXYLP1Q8TE99 480 aa11.19□□□□□ -0.62
SF3A1-207ENST00000471342 EMID1Q96A84 441 aaPredicted RBP11.19□□□□□ -0.62
SF3A1-207ENST00000471342 ERO1AQ96HE7 468 aa11.19□□□□□ -0.62
SF3A1-207ENST00000471342 SCAND2PQ9GZW5 306 aaPredicted RBP11.19□□□□□ -0.62
SF3A1-207ENST00000471342 TTC12Q9H892 705 aaPredicted RBP11.19□□□□□ -0.62
SF3A1-207ENST00000471342 VTA1Q9NP79 307 aa11.19□□□□□ -0.62
SF3A1-207ENST00000471342 BLOC1S4Q9NUP1 217 aa11.19□□□□□ -0.62
SF3A1-207ENST00000471342 CFAP45Q9UL16 551 aa11.19□□□□□ -0.62
SF3A1-207ENST00000471342 MCM3APO60318 1980 aa11.18□□□□□ -0.62
SF3A1-207ENST00000471342 MYADML2A6NDP7 307 aa11.18□□□□□ -0.62
SF3A1-207ENST00000471342 RBAK-RBAKDNI3L0D1 243 aa11.18□□□□□ -0.62
SF3A1-207ENST00000471342 ZBTB39O15060 712 aa11.18□□□□□ -0.62
SF3A1-207ENST00000471342 CUTAO60888 179 aa11.18□□□□□ -0.62
SF3A1-207ENST00000471342 TECP42680 631 aa11.18□□□□□ -0.62
SF3A1-207ENST00000471342 TXKP42681 527 aa11.18□□□□□ -0.62
SF3A1-207ENST00000471342 LBX1P52954 281 aa11.18□□□□□ -0.62
SF3A1-207ENST00000471342 MDM2Q00987 491 aaPredicted RBP11.18□□□□□ -0.62
SF3A1-207ENST00000471342 SETQ01105 290 aaPredicted RBP11.18□□□□□ -0.62
SF3A1-207ENST00000471342 PDE4DQ08499 809 aa11.18□□□□□ -0.62
SF3A1-207ENST00000471342 NFKBIBQ15653 356 aa11.18□□□□□ -0.62
SF3A1-207ENST00000471342 CCDC144BQ3MJ40 725 aa11.18□□□□□ -0.62
SF3A1-207ENST00000471342 TMEM119Q4V9L6 283 aa11.18□□□□□ -0.62
SF3A1-207ENST00000471342 CELF3Q5SZQ8 465 aaKnown RBP11.18□□□□□ -0.62
SF3A1-207ENST00000471342 SEPT14Q6ZU15 432 aa11.18□□□□□ -0.62
SF3A1-207ENST00000471342 SH3RF1Q7Z6J0 888 aa11.18□□□□□ -0.62
SF3A1-207ENST00000471342 KRI1Q8N9T8 703 aaKnown RBP11.18□□□□□ -0.62
SF3A1-207ENST00000471342 KCNG4Q8TDN1 519 aa11.18□□□□□ -0.62
SF3A1-207ENST00000471342 SPATA32Q96LK8 384 aa11.18□□□□□ -0.62
SF3A1-207ENST00000471342 GPR20Q99678 358 aa11.18□□□□□ -0.62
SF3A1-207ENST00000471342 CCSER1Q9C0I3 900 aa11.18□□□□□ -0.62
SF3A1-207ENST00000471342 ABHD16BQ9H3Z7 469 aa11.18□□□□□ -0.62
SF3A1-207ENST00000471342 IVNS1ABPQ9Y6Y0 642 aa11.18□□□□□ -0.62
SF3A1-207ENST00000471342 PLXNA1Q9UIW2 1896 aa11.18□□□□□ -0.62
SF3A1-207ENST00000471342 A0A087WWV3 80 aa11.17□□□□□ -0.62
SF3A1-207ENST00000471342 VWA3AA6NCI4 1184 aa11.17□□□□□ -0.62
SF3A1-207ENST00000471342 ADCY3O60266 1144 aa11.17□□□□□ -0.62
SF3A1-207ENST00000471342 ADAMTS4O75173 837 aa11.17□□□□□ -0.62
SF3A1-207ENST00000471342 LGR5O75473 907 aa11.17□□□□□ -0.62
SF3A1-207ENST00000471342 BMP15O95972 392 aa11.17□□□□□ -0.62
SF3A1-207ENST00000471342 NDUFA8P51970 172 aa11.17□□□□□ -0.62
SF3A1-207ENST00000471342 PSMC6P62333 389 aa11.17□□□□□ -0.62
SF3A1-207ENST00000471342 GNL2Q13823 731 aaKnown RBP11.17□□□□□ -0.62
SF3A1-207ENST00000471342 HIC1Q14526 733 aa11.17□□□□□ -0.62
SF3A1-207ENST00000471342 DUSP28Q4G0W2 176 aa11.17□□□□□ -0.62
SF3A1-207ENST00000471342 IQSEC1Q6DN90 963 aa11.17□□□□□ -0.62
SF3A1-207ENST00000471342 CATSPER3Q86XQ3 398 aa11.17□□□□□ -0.62
SF3A1-207ENST00000471342 FERMT2Q96AC1 680 aa11.17□□□□□ -0.62
SF3A1-207ENST00000471342 NAP1L4Q99733 375 aaKnown RBP11.17□□□□□ -0.62
SF3A1-207ENST00000471342 ZNF577Q9BSK1 485 aa11.17□□□□□ -0.62
SF3A1-207ENST00000471342 UPF3AQ9H1J1 476 aaKnown RBP11.17□□□□□ -0.62
SF3A1-207ENST00000471342 RGL1Q9NZL6 768 aa11.17□□□□□ -0.62
SF3A1-207ENST00000471342 NRBP1Q9UHY1 535 aa11.17□□□□□ -0.62
SF3A1-207ENST00000471342 PCDHA12Q9UN75 941 aa11.17□□□□□ -0.62
SF3A1-207ENST00000471342 TRIM17Q9Y577 477 aa11.17□□□□□ -0.62
SF3A1-207ENST00000471342 ATP6V1DQ9Y5K8 247 aa11.17□□□□□ -0.62
SF3A1-207ENST00000471342 A0A1B0GVL5 298 aa11.16□□□□□ -0.62
SF3A1-207ENST00000471342 ZBTB42B2RXF5 422 aa11.16□□□□□ -0.62
SF3A1-207ENST00000471342 ACTN4O43707 911 aaKnown RBP11.16□□□□□ -0.62
SF3A1-207ENST00000471342 NR1I2O75469 434 aa11.16□□□□□ -0.62
SF3A1-207ENST00000471342 PFKFB1P16118 471 aa11.16□□□□□ -0.62
SF3A1-207ENST00000471342 LONP1P36776 959 aaKnown RBP11.16□□□□□ -0.62
SF3A1-207ENST00000471342 ACTR2P61160 394 aa11.16□□□□□ -0.62
SF3A1-207ENST00000471342 STK38Q15208 465 aa11.16□□□□□ -0.62
SF3A1-207ENST00000471342 LRCH2Q5VUJ6 765 aa11.16□□□□□ -0.62
SF3A1-207ENST00000471342 PDXDC2PQ6P474 469 aa11.16□□□□□ -0.62
SF3A1-207ENST00000471342 METTL7BQ6UX53 244 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms