RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.32□□□□□ -0.76
PTPRE-207ENST00000471218 NIPA1Q7RTP0 329 aa10.32□□□□□ -0.76
PTPRE-207ENST00000471218 RNF180Q86T96 592 aa10.32□□□□□ -0.76
PTPRE-207ENST00000471218 ANP32BQ92688 251 aaKnown RBP10.32□□□□□ -0.76
PTPRE-207ENST00000471218 KIFC2Q96AC6 838 aa10.32□□□□□ -0.76
PTPRE-207ENST00000471218 FAM20AQ96MK3 541 aa10.32□□□□□ -0.76
PTPRE-207ENST00000471218 MTMR9Q96QG7 549 aa10.32□□□□□ -0.76
PTPRE-207ENST00000471218 ANO3Q9BYT9 981 aa10.32□□□□□ -0.76
PTPRE-207ENST00000471218 TANGO6Q9C0B7 1094 aa10.32□□□□□ -0.76
PTPRE-207ENST00000471218 NAT10Q9H0A0 1025 aaKnown RBP10.32□□□□□ -0.76
PTPRE-207ENST00000471218 SPATC1LQ9H0A9 340 aa10.32□□□□□ -0.76
PTPRE-207ENST00000471218 CSRNP2Q9H175 543 aa10.32□□□□□ -0.76
PTPRE-207ENST00000471218 ANO10Q9NW15 660 aa10.32□□□□□ -0.76
PTPRE-207ENST00000471218 KIAA1468Q9P260 1216 aa10.32□□□□□ -0.76
PTPRE-207ENST00000471218 ATP11BQ9Y2G3 1177 aa10.32□□□□□ -0.76
PTPRE-207ENST00000471218 DIS3Q9Y2L1 958 aaKnown RBP10.32□□□□□ -0.76
PTPRE-207ENST00000471218 FRMPD4Q14CM0 1322 aa10.32□□□□□ -0.76
PTPRE-207ENST00000471218 PLXNB2O15031 1838 aa10.31□□□□□ -0.76
PTPRE-207ENST00000471218 A0A1B0GVL5 298 aa10.31□□□□□ -0.76
PTPRE-207ENST00000471218 VWA5AO00534 786 aa10.31□□□□□ -0.76
PTPRE-207ENST00000471218 FLOT1O75955 427 aa10.31□□□□□ -0.76
PTPRE-207ENST00000471218 RARBP10826 455 aa10.31□□□□□ -0.76
PTPRE-207ENST00000471218 CYP2C19P33261 490 aa10.31□□□□□ -0.76
PTPRE-207ENST00000471218 ARHGAP4P98171 946 aa10.31□□□□□ -0.76
PTPRE-207ENST00000471218 SETQ01105 290 aaPredicted RBP10.31□□□□□ -0.76
PTPRE-207ENST00000471218 TYRO3Q06418 890 aa10.31□□□□□ -0.76
PTPRE-207ENST00000471218 SNX17Q15036 470 aa10.31□□□□□ -0.76
PTPRE-207ENST00000471218 LETM2Q2VYF4 491 aa10.31□□□□□ -0.76
PTPRE-207ENST00000471218 NT5DC1Q5TFE4 455 aa10.31□□□□□ -0.76
PTPRE-207ENST00000471218 JAKMIP3Q5VZ66 844 aa10.31□□□□□ -0.76
PTPRE-207ENST00000471218 KRBA2Q6ZNG9 492 aa10.31□□□□□ -0.76
PTPRE-207ENST00000471218 MSL3Q8N5Y2 521 aaKnown RBP10.31□□□□□ -0.76
PTPRE-207ENST00000471218 IGSF22Q8N9C0 903 aa10.31□□□□□ -0.76
PTPRE-207ENST00000471218 CNNM3Q8NE01 707 aa10.31□□□□□ -0.76
PTPRE-207ENST00000471218 SPATA20Q8TB22 786 aa10.31□□□□□ -0.76
PTPRE-207ENST00000471218 FAM200AQ8TCP9 573 aa10.31□□□□□ -0.76
PTPRE-207ENST00000471218 RASGRP4Q8TDF6 673 aa10.31□□□□□ -0.76
PTPRE-207ENST00000471218 BPIFA3Q9BQP9 254 aa10.31□□□□□ -0.76
PTPRE-207ENST00000471218 COL25A1Q9BXS0 654 aaPredicted RBP10.31□□□□□ -0.76
PTPRE-207ENST00000471218 MOV10L1Q9BXT6 1211 aaKnown RBP10.31□□□□□ -0.76
PTPRE-207ENST00000471218 KCNMB3Q9NPA1 279 aa10.31□□□□□ -0.76
PTPRE-207ENST00000471218 FLRT1Q9NZU1 646 aa10.31□□□□□ -0.76
PTPRE-207ENST00000471218 BTBD7Q9P203 1132 aa10.31□□□□□ -0.76
PTPRE-207ENST00000471218 CCDC39Q9UFE4 941 aa10.31□□□□□ -0.76
PTPRE-207ENST00000471218 TUBE1Q9UJT0 475 aa10.31□□□□□ -0.76
PTPRE-207ENST00000471218 CCPG1Q9ULG6 757 aa10.31□□□□□ -0.76
PTPRE-207ENST00000471218 CTDP1Q9Y5B0 961 aaPredicted RBP10.31□□□□□ -0.76
PTPRE-207ENST00000471218 VWA3AA6NCI4 1184 aa10.3□□□□□ -0.76
PTPRE-207ENST00000471218 OPLAHO14841 1288 aa10.3□□□□□ -0.76
PTPRE-207ENST00000471218 SMC2O95347 1197 aa10.3□□□□□ -0.76
PTPRE-207ENST00000471218 IGHA2P01877 340 aa10.3□□□□□ -0.76
PTPRE-207ENST00000471218 ERCC3P19447 782 aa10.3□□□□□ -0.76
PTPRE-207ENST00000471218 ATP2B1P20020 1258 aa10.3□□□□□ -0.76
PTPRE-207ENST00000471218 MUTP22033 750 aa10.3□□□□□ -0.76
PTPRE-207ENST00000471218 DSG3P32926 999 aa10.3□□□□□ -0.76
PTPRE-207ENST00000471218 UBA7P41226 1012 aa10.3□□□□□ -0.76
PTPRE-207ENST00000471218 CALCRLQ16602 461 aa10.3□□□□□ -0.76
PTPRE-207ENST00000471218 GJC2Q5T442 439 aaPredicted RBP10.3□□□□□ -0.76
PTPRE-207ENST00000471218 NCAPG2Q86XI2 1143 aa10.3□□□□□ -0.76
PTPRE-207ENST00000471218 CEP57L1Q8IYX8 460 aa10.3□□□□□ -0.76
PTPRE-207ENST00000471218 NPLOC4Q8TAT6 608 aa10.3□□□□□ -0.76
PTPRE-207ENST00000471218 GUCD1Q96NT3 240 aa10.3□□□□□ -0.76
PTPRE-207ENST00000471218 CLIC6Q96NY7 704 aa10.3□□□□□ -0.76
PTPRE-207ENST00000471218 TSEN34Q9BSV6 310 aaKnown RBP10.3□□□□□ -0.76
PTPRE-207ENST00000471218 TEX13BQ9BXU2 312 aa10.3□□□□□ -0.76
PTPRE-207ENST00000471218 LRRC27Q9C0I9 530 aa10.3□□□□□ -0.76
PTPRE-207ENST00000471218 SEMA6BQ9H3T3 888 aa10.3□□□□□ -0.76
PTPRE-207ENST00000471218 PRDM5Q9NQX1 630 aaPredicted RBP10.3□□□□□ -0.76
PTPRE-207ENST00000471218 STK17AQ9UEE5 414 aa10.3□□□□□ -0.76
PTPRE-207ENST00000471218 FBXO40Q9UH90 709 aa10.3□□□□□ -0.76
PTPRE-207ENST00000471218 DDX25Q9UHL0 483 aaKnown RBP10.3□□□□□ -0.76
PTPRE-207ENST00000471218 ZNF536O15090 1300 aa10.3□□□□□ -0.76
PTPRE-207ENST00000471218 KDM3AQ9Y4C1 1321 aa10.3□□□□□ -0.76
PTPRE-207ENST00000471218 LOC102724159A0A0B4J2E5 919 aa10.29□□□□□ -0.76
PTPRE-207ENST00000471218 ACTN4O43707 911 aaKnown RBP10.29□□□□□ -0.76
PTPRE-207ENST00000471218 PEX10O60683 326 aa10.29□□□□□ -0.76
PTPRE-207ENST00000471218 STAM2O75886 525 aa10.29□□□□□ -0.76
PTPRE-207ENST00000471218 PLS1Q14651 629 aa10.29□□□□□ -0.76
PTPRE-207ENST00000471218 KCTD2Q14681 263 aa10.29□□□□□ -0.76
PTPRE-207ENST00000471218 PWP2Q15269 919 aaKnown RBP10.29□□□□□ -0.76
PTPRE-207ENST00000471218 UBE2SQ16763 222 aa10.29□□□□□ -0.76
PTPRE-207ENST00000471218 HYIQ5T013 277 aa10.29□□□□□ -0.76
PTPRE-207ENST00000471218 POTEEQ6S8J3 1075 aa10.29□□□□□ -0.76
PTPRE-207ENST00000471218 SH3RF1Q7Z6J0 888 aa10.29□□□□□ -0.76
PTPRE-207ENST00000471218 GAS2L3Q86XJ1 694 aa10.29□□□□□ -0.76
PTPRE-207ENST00000471218 CHST13Q8NET6 341 aa10.29□□□□□ -0.76
PTPRE-207ENST00000471218 REPS2Q8NFH8 660 aa10.29□□□□□ -0.76
PTPRE-207ENST00000471218 MAFAQ8NHW3 353 aaPredicted RBP10.29□□□□□ -0.76
PTPRE-207ENST00000471218 TOX2Q96NM4 488 aa10.29□□□□□ -0.76
PTPRE-207ENST00000471218 GSDMAQ96QA5 445 aa10.29□□□□□ -0.76
PTPRE-207ENST00000471218 CDX2Q99626 313 aaPredicted RBP10.29□□□□□ -0.76
PTPRE-207ENST00000471218 DISC1Q9NRI5 854 aa10.29□□□□□ -0.76
PTPRE-207ENST00000471218 DACH1Q9UI36 760 aa10.29□□□□□ -0.76
PTPRE-207ENST00000471218 MROH7Q68CQ1 1323 aa10.29□□□□□ -0.76
PTPRE-207ENST00000471218 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.28□□□□□ -0.76
PTPRE-207ENST00000471218 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.28□□□□□ -0.76
PTPRE-207ENST00000471218 DCDC2CA8MYV0 355 aa10.28□□□□□ -0.76
PTPRE-207ENST00000471218 WNT7AO00755 349 aa10.28□□□□□ -0.76
PTPRE-207ENST00000471218 POLR2DO15514 142 aaKnown RBP10.28□□□□□ -0.76
PTPRE-207ENST00000471218 MYCNP04198 464 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms