RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 IER5LQ5T953 404 aa10.65□□□□□ -0.7
CCDC171-204ENST00000470191 MFSD6Q6ZSS7 791 aa10.65□□□□□ -0.7
CCDC171-204ENST00000470191 SERINC5Q86VE9 423 aa10.65□□□□□ -0.7
CCDC171-204ENST00000470191 MCF2L2Q86YR7 1114 aa10.65□□□□□ -0.7
CCDC171-204ENST00000470191 FIBCD1Q8N539 461 aa10.65□□□□□ -0.7
CCDC171-204ENST00000470191 GPKOWQ92917 476 aaPredicted RBP eCLIP10.65□□□□□ -0.7
CCDC171-204ENST00000470191 TOP1MTQ969P6 601 aa10.65□□□□□ -0.7
CCDC171-204ENST00000470191 KCNH6Q9H252 994 aa10.65□□□□□ -0.7
CCDC171-204ENST00000470191 FAM86C1Q9NVL1 165 aa10.65□□□□□ -0.7
CCDC171-204ENST00000470191 RCAN3Q9UKA8 241 aa10.65□□□□□ -0.7
CCDC171-204ENST00000470191 LAMA4Q16363 1823 aa10.65□□□□□ -0.71
CCDC171-204ENST00000470191 LOXHD1Q8IVV2 1947 aa10.64□□□□□ -0.71
CCDC171-204ENST00000470191 NEDD4P46934 1319 aa10.64□□□□□ -0.71
CCDC171-204ENST00000470191 MYO7AQ13402 2215 aa10.64□□□□□ -0.71
CCDC171-204ENST00000470191 A0A0D9SFI3 127 aa10.64□□□□□ -0.71
CCDC171-204ENST00000470191 SMIM10L2AP0DMW4 78 aa10.64□□□□□ -0.71
CCDC171-204ENST00000470191 SMIM10L2BP0DMW5 78 aa10.64□□□□□ -0.71
CCDC171-204ENST00000470191 SNHG28P0DPA3 235 aa10.64□□□□□ -0.71
CCDC171-204ENST00000470191 SP2Q02086 613 aa10.64□□□□□ -0.71
CCDC171-204ENST00000470191 ALX1Q15699 326 aa10.64□□□□□ -0.71
CCDC171-204ENST00000470191 SMAD2Q15796 467 aaKnown RBP10.64□□□□□ -0.71
CCDC171-204ENST00000470191 MYSM1Q5VVJ2 828 aa10.64□□□□□ -0.71
CCDC171-204ENST00000470191 TBC1D10CQ8IV04 446 aa10.64□□□□□ -0.71
CCDC171-204ENST00000470191 PNMA1Q8ND90 353 aa10.64□□□□□ -0.71
CCDC171-204ENST00000470191 EMID1Q96A84 441 aaPredicted RBP10.64□□□□□ -0.71
CCDC171-204ENST00000470191 PBXIP1Q96AQ6 731 aa10.64□□□□□ -0.71
CCDC171-204ENST00000470191 IL17RAQ96F46 866 aa10.64□□□□□ -0.71
CCDC171-204ENST00000470191 TTC14Q96N46 770 aa10.64□□□□□ -0.71
CCDC171-204ENST00000470191 BCAS3Q9H6U6 928 aa10.64□□□□□ -0.71
CCDC171-204ENST00000470191 MLXIPQ9HAP2 919 aa10.64□□□□□ -0.71
CCDC171-204ENST00000470191 MRPL11Q9Y3B7 192 aaKnown RBP10.64□□□□□ -0.71
CCDC171-204ENST00000470191 SUPT16HQ9Y5B9 1047 aaKnown RBP10.64□□□□□ -0.71
CCDC171-204ENST00000470191 ZNF318Q5VUA4 2279 aa10.64□□□□□ -0.71
CCDC171-204ENST00000470191 PLXNA4Q9HCM2 1894 aa10.64□□□□□ -0.71
CCDC171-204ENST00000470191 TMEM221A6NGB7 291 aa10.63□□□□□ -0.71
CCDC171-204ENST00000470191 H3BRB1 525 aa10.63□□□□□ -0.71
CCDC171-204ENST00000470191 M0R296 226 aa10.63□□□□□ -0.71
CCDC171-204ENST00000470191 TBX10O75333 385 aa10.63□□□□□ -0.71
CCDC171-204ENST00000470191 PPFIA4O75335 1185 aa10.63□□□□□ -0.71
CCDC171-204ENST00000470191 HSPD1P10809 573 aaKnown RBP10.63□□□□□ -0.71
CCDC171-204ENST00000470191 HOXA13P31271 388 aaPredicted RBP10.63□□□□□ -0.71
CCDC171-204ENST00000470191 NDUFV1P49821 464 aa10.63□□□□□ -0.71
CCDC171-204ENST00000470191 NMIQ13287 307 aaPredicted RBP10.63□□□□□ -0.71
CCDC171-204ENST00000470191 HERC4Q5GLZ8 1057 aaPredicted RBP10.63□□□□□ -0.71
CCDC171-204ENST00000470191 CELF3Q5SZQ8 465 aaKnown RBP10.63□□□□□ -0.71
CCDC171-204ENST00000470191 ZNF589Q86UQ0 364 aaPredicted RBP10.63□□□□□ -0.71
CCDC171-204ENST00000470191 IL31RAQ8NI17 732 aa10.63□□□□□ -0.71
CCDC171-204ENST00000470191 POP1Q99575 1024 aaKnown RBP10.63□□□□□ -0.71
CCDC171-204ENST00000470191 C16orf70Q9BSU1 422 aa10.63□□□□□ -0.71
CCDC171-204ENST00000470191 RNPEPQ9H4A4 650 aa10.63□□□□□ -0.71
CCDC171-204ENST00000470191 TUT1Q9H6E5 874 aaKnown RBP10.63□□□□□ -0.71
CCDC171-204ENST00000470191 KAT14Q9H8E8 782 aa10.63□□□□□ -0.71
CCDC171-204ENST00000470191 JMJD4Q9H9V9 463 aa10.63□□□□□ -0.71
CCDC171-204ENST00000470191 ALG13Q9NP73 1137 aaKnown RBP10.63□□□□□ -0.71
CCDC171-204ENST00000470191 HELLSQ9NRZ9 838 aa10.63□□□□□ -0.71
CCDC171-204ENST00000470191 SETD4Q9NVD3 440 aa10.63□□□□□ -0.71
CCDC171-204ENST00000470191 CD207Q9UJ71 328 aa10.63□□□□□ -0.71
CCDC171-204ENST00000470191 CCDC171Q6TFL3 1326 aa10.62□□□□□ -0.71
CCDC171-204ENST00000470191 TRIOO75962 3097 aa10.62□□□□□ -0.71
CCDC171-204ENST00000470191 TRIM6-TRIM34B2RNG4 842 aa10.62□□□□□ -0.71
CCDC171-204ENST00000470191 KDM4AO75164 1064 aa10.62□□□□□ -0.71
CCDC171-204ENST00000470191 RGS20O76081 388 aa10.62□□□□□ -0.71
CCDC171-204ENST00000470191 LGALS2P05162 132 aa10.62□□□□□ -0.71
CCDC171-204ENST00000470191 IBSPP21815 317 aaPredicted RBP10.62□□□□□ -0.71
CCDC171-204ENST00000470191 UBA1P22314 1058 aaKnown RBP10.62□□□□□ -0.71
CCDC171-204ENST00000470191 BMPR1AP36894 532 aa10.62□□□□□ -0.71
CCDC171-204ENST00000470191 SP4Q02446 784 aa10.62□□□□□ -0.71
CCDC171-204ENST00000470191 MCMDC2Q4G0Z9 681 aa10.62□□□□□ -0.71
CCDC171-204ENST00000470191 UTP14CQ5TAP6 766 aaKnown RBP10.62□□□□□ -0.71
CCDC171-204ENST00000470191 SUGP1Q8IWZ8 645 aaKnown RBP10.62□□□□□ -0.71
CCDC171-204ENST00000470191 ESR2Q92731 530 aa10.62□□□□□ -0.71
CCDC171-204ENST00000470191 EDAQ92838 391 aa10.62□□□□□ -0.71
CCDC171-204ENST00000470191 EVI5LQ96CN4 794 aa10.62□□□□□ -0.71
CCDC171-204ENST00000470191 PDCD2LQ9BRP1 358 aa10.62□□□□□ -0.71
CCDC171-204ENST00000470191 C11orf84Q9BUA3 381 aaPredicted RBP10.62□□□□□ -0.71
CCDC171-204ENST00000470191 ZBTB47Q9UFB7 747 aaPredicted RBP10.62□□□□□ -0.71
CCDC171-204ENST00000470191 METRNQ9UJH8 293 aa10.62□□□□□ -0.71
CCDC171-204ENST00000470191 PIEZO1Q92508 2521 aa10.62□□□□□ -0.71
CCDC171-204ENST00000470191 COL4A6Q14031 1691 aa10.62□□□□□ -0.71
CCDC171-204ENST00000470191 TECTAO75443 2155 aa10.61□□□□□ -0.71
CCDC171-204ENST00000470191 NOP56O00567 594 aaKnown RBP10.61□□□□□ -0.71
CCDC171-204ENST00000470191 OPLAHO14841 1288 aa10.61□□□□□ -0.71
CCDC171-204ENST00000470191 NCK2O43639 380 aa10.61□□□□□ -0.71
CCDC171-204ENST00000470191 PARP1P09874 1014 aaKnown RBP10.61□□□□□ -0.71
CCDC171-204ENST00000470191 GHRP10912 638 aa10.61□□□□□ -0.71
CCDC171-204ENST00000470191 CCND2P30279 289 aa10.61□□□□□ -0.71
CCDC171-204ENST00000470191 PTPN5P54829 565 aa10.61□□□□□ -0.71
CCDC171-204ENST00000470191 ARHGAP4P98171 946 aa10.61□□□□□ -0.71
CCDC171-204ENST00000470191 SMAD4Q13485 552 aaKnown RBP10.61□□□□□ -0.71
CCDC171-204ENST00000470191 BTG3Q14201 252 aaPredicted RBP10.61□□□□□ -0.71
CCDC171-204ENST00000470191 COL19A1Q14993 1142 aa10.61□□□□□ -0.71
CCDC171-204ENST00000470191 PGM5Q15124 567 aa10.61□□□□□ -0.71
CCDC171-204ENST00000470191 CTC1Q2NKJ3 1217 aa10.61□□□□□ -0.71
CCDC171-204ENST00000470191 LCE2DQ5TA82 110 aaPredicted RBP10.61□□□□□ -0.71
CCDC171-204ENST00000470191 TRIM67Q6ZTA4 783 aa10.61□□□□□ -0.71
CCDC171-204ENST00000470191 RBM23Q86U06 439 aaKnown RBP10.61□□□□□ -0.71
CCDC171-204ENST00000470191 FCHSD1Q86WN1 690 aa10.61□□□□□ -0.71
CCDC171-204ENST00000470191 TRIM50Q86XT4 487 aa10.61□□□□□ -0.71
CCDC171-204ENST00000470191 ADGRA3Q8IWK6 1321 aa10.6□□□□□ -0.71
CCDC171-204ENST00000470191 B4E1Z4 1266 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms