RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 ZNF28P17035 718 aa8.37□□□□□ -1.07
COL11A1-208ENST00000470170 GPR85P60893 370 aa8.37□□□□□ -1.07
COL11A1-208ENST00000470170 CYP4F22Q6NT55 531 aa8.37□□□□□ -1.07
COL11A1-208ENST00000470170 OTOP3Q7RTS5 596 aa8.37□□□□□ -1.07
COL11A1-208ENST00000470170 CLEC4DQ8WXI8 215 aa8.37□□□□□ -1.07
COL11A1-208ENST00000470170 CLIC6Q96NY7 704 aa8.37□□□□□ -1.07
COL11A1-208ENST00000470170 SPATA9Q9BWV2 254 aa8.37□□□□□ -1.07
COL11A1-208ENST00000470170 CROTQ9UKG9 612 aa8.37□□□□□ -1.07
COL11A1-208ENST00000470170 ASXL2Q76L83 1435 aa8.37□□□□□ -1.07
COL11A1-208ENST00000470170 MROH6A6NGR9 719 aa8.36□□□□□ -1.07
COL11A1-208ENST00000470170 K7ESM1 405 aa8.36□□□□□ -1.07
COL11A1-208ENST00000470170 GNAT1P11488 350 aa8.36□□□□□ -1.07
COL11A1-208ENST00000470170 MLLT6P55198 1093 aaPredicted RBP8.36□□□□□ -1.07
COL11A1-208ENST00000470170 NFKB2Q00653 900 aa8.36□□□□□ -1.07
COL11A1-208ENST00000470170 EFEMP1Q12805 493 aa8.36□□□□□ -1.07
COL11A1-208ENST00000470170 IFNL3Q8IZI9 196 aa8.36□□□□□ -1.07
COL11A1-208ENST00000470170 ZNF669Q96BR6 464 aaPredicted RBP8.36□□□□□ -1.07
COL11A1-208ENST00000470170 ZFYVE21Q9BQ24 234 aa8.36□□□□□ -1.07
COL11A1-208ENST00000470170 PFDN2Q9UHV9 154 aa8.36□□□□□ -1.07
COL11A1-208ENST00000470170 NKRFO15226 690 aaKnown RBP eCLIP8.35□□□□□ -1.07
COL11A1-208ENST00000470170 LTFP02788 710 aa8.35□□□□□ -1.07
COL11A1-208ENST00000470170 ATP2B1P20020 1258 aa8.35□□□□□ -1.07
COL11A1-208ENST00000470170 KIAA2012Q0VF49 1180 aa8.35□□□□□ -1.07
COL11A1-208ENST00000470170 MTERF2Q49AM1 385 aa8.35□□□□□ -1.07
COL11A1-208ENST00000470170 TRIM48Q8IWZ4 208 aa8.35□□□□□ -1.07
COL11A1-208ENST00000470170 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.35□□□□□ -1.07
COL11A1-208ENST00000470170 TMEM209Q96SK2 561 aa8.35□□□□□ -1.07
COL11A1-208ENST00000470170 INVSQ9Y283 1065 aa8.35□□□□□ -1.07
COL11A1-208ENST00000470170 TRAF6Q9Y4K3 522 aa8.35□□□□□ -1.07
COL11A1-208ENST00000470170 ADCY3O60266 1144 aa8.34□□□□□ -1.07
COL11A1-208ENST00000470170 SOD2P04179 222 aa8.34□□□□□ -1.07
COL11A1-208ENST00000470170 IL13P35225 146 aa8.34□□□□□ -1.07
COL11A1-208ENST00000470170 SPIRE1Q08AE8 756 aa8.34□□□□□ -1.07
COL11A1-208ENST00000470170 TUSC3Q13454 348 aa8.34□□□□□ -1.07
COL11A1-208ENST00000470170 RASGRF1Q13972 1273 aa8.34□□□□□ -1.07
COL11A1-208ENST00000470170 PHF19Q5T6S3 580 aa8.34□□□□□ -1.07
COL11A1-208ENST00000470170 FAM124AQ86V42 546 aa8.34□□□□□ -1.07
COL11A1-208ENST00000470170 PROSER1Q86XN7 944 aa8.34□□□□□ -1.07
COL11A1-208ENST00000470170 TTLL11Q8NHH1 800 aa8.34□□□□□ -1.07
COL11A1-208ENST00000470170 UHMK1Q8TAS1 419 aaKnown RBP8.34□□□□□ -1.07
COL11A1-208ENST00000470170 ZCCHC14Q8WYQ9 949 aaKnown RBP8.34□□□□□ -1.07
COL11A1-208ENST00000470170 LCORQ96JN0 433 aaPredicted RBP8.34□□□□□ -1.07
COL11A1-208ENST00000470170 IPPKQ9H8X2 491 aa8.34□□□□□ -1.07
COL11A1-208ENST00000470170 L2HGDHQ9H9P8 463 aa8.34□□□□□ -1.07
COL11A1-208ENST00000470170 CYP1A1P04798 512 aaPredicted RBP8.33□□□□□ -1.08
COL11A1-208ENST00000470170 ADRB1P08588 477 aa8.33□□□□□ -1.08
COL11A1-208ENST00000470170 SSRP1Q08945 709 aaKnown RBP8.33□□□□□ -1.08
COL11A1-208ENST00000470170 SPATS1Q496A3 300 aa8.33□□□□□ -1.08
COL11A1-208ENST00000470170 BORAQ6PGQ7 559 aa8.33□□□□□ -1.08
COL11A1-208ENST00000470170 LGI4Q8N135 537 aa8.33□□□□□ -1.08
COL11A1-208ENST00000470170 TELO2Q9Y4R8 837 aa8.33□□□□□ -1.08
COL11A1-208ENST00000470170 DIAPH1O60610 1272 aaKnown RBP8.32□□□□□ -1.08
COL11A1-208ENST00000470170 ITGB3P05106 788 aa8.32□□□□□ -1.08
COL11A1-208ENST00000470170 GTF2F1P35269 517 aaKnown RBP eCLIP8.32□□□□□ -1.08
COL11A1-208ENST00000470170 TBC1D10BQ4KMP7 808 aaPredicted RBP8.32□□□□□ -1.08
COL11A1-208ENST00000470170 HABP4Q5JVS0 413 aaKnown RBP8.32□□□□□ -1.08
COL11A1-208ENST00000470170 FOXB2Q5VYV0 432 aa8.32□□□□□ -1.08
COL11A1-208ENST00000470170 HHIPL2Q6UWX4 724 aa8.32□□□□□ -1.08
COL11A1-208ENST00000470170 YTHDC1Q96MU7 727 aaKnown RBP8.32□□□□□ -1.08
COL11A1-208ENST00000470170 RBM15Q96T37 977 aaKnown RBP eCLIP8.32□□□□□ -1.08
COL11A1-208ENST00000470170 CDC6Q99741 560 aa8.32□□□□□ -1.08
COL11A1-208ENST00000470170 ALG1Q9BT22 464 aa8.32□□□□□ -1.08
COL11A1-208ENST00000470170 CCDC113Q9H0I3 377 aa8.32□□□□□ -1.08
COL11A1-208ENST00000470170 HSPBP1Q9NZL4 362 aa8.32□□□□□ -1.08
COL11A1-208ENST00000470170 C9orf118A6NHY6 69 aa8.31□□□□□ -1.08
COL11A1-208ENST00000470170 FAM47E-STBD1D6RA91 191 aa8.31□□□□□ -1.08
COL11A1-208ENST00000470170 PLATP00750 562 aa8.31□□□□□ -1.08
COL11A1-208ENST00000470170 PAN2Q504Q3 1202 aaKnown RBP8.31□□□□□ -1.08
COL11A1-208ENST00000470170 FAM209AQ5JX71 171 aa8.31□□□□□ -1.08
COL11A1-208ENST00000470170 NBPF6Q5VWK0 638 aa8.31□□□□□ -1.08
COL11A1-208ENST00000470170 VASNQ6EMK4 673 aa8.31□□□□□ -1.08
COL11A1-208ENST00000470170 TRMT10BQ6PF06 316 aaKnown RBP8.31□□□□□ -1.08
COL11A1-208ENST00000470170 NBPF4Q96M43 638 aa8.31□□□□□ -1.08
COL11A1-208ENST00000470170 WRNIP1Q96S55 665 aa8.31□□□□□ -1.08
COL11A1-208ENST00000470170 TMEM168Q9H0V1 697 aa8.31□□□□□ -1.08
COL11A1-208ENST00000470170 CNOT11Q9UKZ1 510 aaKnown RBP8.31□□□□□ -1.08
COL11A1-208ENST00000470170 DSEQ9UL01 958 aa8.31□□□□□ -1.08
COL11A1-208ENST00000470170 TRBV23-1A0A0A0MS06 115 aa8.3□□□□□ -1.08
COL11A1-208ENST00000470170 B4GALT3O60512 393 aa8.3□□□□□ -1.08
COL11A1-208ENST00000470170 CYP7B1O75881 506 aa8.3□□□□□ -1.08
COL11A1-208ENST00000470170 FAHP16930 419 aa8.3□□□□□ -1.08
COL11A1-208ENST00000470170 DPH6Q7L8W6 267 aa8.3□□□□□ -1.08
COL11A1-208ENST00000470170 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.3□□□□□ -1.08
COL11A1-208ENST00000470170 SCUBE1Q8IWY4 988 aa8.3□□□□□ -1.08
COL11A1-208ENST00000470170 MBD6Q96DN6 1003 aa8.3□□□□□ -1.08
COL11A1-208ENST00000470170 ZNF827Q17R98 1081 aa8.29□□□□□ -1.08
COL11A1-208ENST00000470170 KCTD1Q719H9 257 aa8.29□□□□□ -1.08
COL11A1-208ENST00000470170 MTDHQ86UE4 582 aaKnown RBP8.29□□□□□ -1.08
COL11A1-208ENST00000470170 DTX3Q8N9I9 347 aa8.29□□□□□ -1.08
COL11A1-208ENST00000470170 ZBTB38Q8NAP3 1195 aaPredicted RBP8.29□□□□□ -1.08
COL11A1-208ENST00000470170 C8orf37Q96NL8 207 aa8.29□□□□□ -1.08
COL11A1-208ENST00000470170 CD244Q9BZW8 370 aa8.29□□□□□ -1.08
COL11A1-208ENST00000470170 DLL4Q9NR61 685 aa8.29□□□□□ -1.08
COL11A1-208ENST00000470170 SIRPGQ9P1W8 387 aa8.29□□□□□ -1.08
COL11A1-208ENST00000470170 NUB1Q9Y5A7 615 aa8.29□□□□□ -1.08
COL11A1-208ENST00000470170 ZNF536O15090 1300 aa8.29□□□□□ -1.08
COL11A1-208ENST00000470170 TCRBV5S4A2TA0A5A2 114 aa8.28□□□□□ -1.08
COL11A1-208ENST00000470170 CKMP06732 381 aa8.28□□□□□ -1.08
COL11A1-208ENST00000470170 C6orf222P0C671 652 aaPredicted RBP8.28□□□□□ -1.08
COL11A1-208ENST00000470170 FAM153BP0C7A2 387 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms