RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 CAGE1Q8TC20 777 aa18.79■□□□□ 0.6
GTF3C2-209ENST00000470115 AFAP1L1Q8TED9 768 aa18.79■□□□□ 0.6
GTF3C2-209ENST00000470115 MYLIPQ8WY64 445 aa18.79■□□□□ 0.6
GTF3C2-209ENST00000470115 TIFAQ96CG3 184 aa18.79■□□□□ 0.6
GTF3C2-209ENST00000470115 GPRASP2Q96D09 838 aa18.79■□□□□ 0.6
GTF3C2-209ENST00000470115 GPR20Q99678 358 aa18.79■□□□□ 0.6
GTF3C2-209ENST00000470115 USP26Q9BXU7 913 aa18.79■□□□□ 0.6
GTF3C2-209ENST00000470115 FTOQ9C0B1 505 aaKnown RBP eCLIP18.79■□□□□ 0.6
GTF3C2-209ENST00000470115 TUT1Q9H6E5 874 aaKnown RBP18.79■□□□□ 0.6
GTF3C2-209ENST00000470115 BARHL2Q9NY43 387 aa18.79■□□□□ 0.6
GTF3C2-209ENST00000470115 UBIAD1Q9Y5Z9 338 aa18.79■□□□□ 0.6
GTF3C2-209ENST00000470115 CHD9Q3L8U1 2897 aa18.79■□□□□ 0.6
GTF3C2-209ENST00000470115 CCDC196A0A1B0GTZ2 297 aa18.78■□□□□ 0.6
GTF3C2-209ENST00000470115 SMCO2A6NFE2 343 aa18.78■□□□□ 0.6
GTF3C2-209ENST00000470115 hCG_1984214I3L0E3 225 aa18.78■□□□□ 0.6
GTF3C2-209ENST00000470115 ATP9AO75110 1047 aa18.78■□□□□ 0.6
GTF3C2-209ENST00000470115 SELPP16109 830 aa18.78■□□□□ 0.6
GTF3C2-209ENST00000470115 ADCY7P51828 1080 aa18.78■□□□□ 0.6
GTF3C2-209ENST00000470115 PTK7Q13308 1070 aa18.78■□□□□ 0.6
GTF3C2-209ENST00000470115 FBXL16Q8N461 479 aa18.78■□□□□ 0.6
GTF3C2-209ENST00000470115 ZNF713Q8N859 430 aaPredicted RBP18.78■□□□□ 0.6
GTF3C2-209ENST00000470115 SLC17A8Q8NDX2 589 aa18.78■□□□□ 0.6
GTF3C2-209ENST00000470115 AGXT2Q9BYV1 514 aa18.78■□□□□ 0.6
GTF3C2-209ENST00000470115 DOCK5Q9H7D0 1870 aa18.77■□□□□ 0.6
GTF3C2-209ENST00000470115 TRIP12Q14669 1992 aaPredicted RBP18.77■□□□□ 0.6
GTF3C2-209ENST00000470115 A0A0C4DFX4 3053 aa18.77■□□□□ 0.6
GTF3C2-209ENST00000470115 EPB41L2O43491 1005 aaKnown RBP18.77■□□□□ 0.6
GTF3C2-209ENST00000470115 CKBP12277 381 aa18.77■□□□□ 0.6
GTF3C2-209ENST00000470115 GRIN2CQ14957 1233 aa18.77■□□□□ 0.6
GTF3C2-209ENST00000470115 UTP14CQ5TAP6 766 aaKnown RBP18.77■□□□□ 0.6
GTF3C2-209ENST00000470115 GIMAP8Q8ND71 665 aaPredicted RBP18.77■□□□□ 0.6
GTF3C2-209ENST00000470115 WNT8BQ93098 351 aa18.77■□□□□ 0.6
GTF3C2-209ENST00000470115 CDHR1Q96JP9 859 aa18.77■□□□□ 0.6
GTF3C2-209ENST00000470115 PGBD1Q96JS3 809 aa18.77■□□□□ 0.6
GTF3C2-209ENST00000470115 ZNF576Q9H609 170 aa18.77■□□□□ 0.6
GTF3C2-209ENST00000470115 EHMT1Q9H9B1 1298 aa18.77■□□□□ 0.6
GTF3C2-209ENST00000470115 PKD2L1Q9P0L9 805 aa18.77■□□□□ 0.6
GTF3C2-209ENST00000470115 MSRAQ9UJ68 235 aa18.77■□□□□ 0.6
GTF3C2-209ENST00000470115 CDH23Q9H251 3354 aa18.77■□□□□ 0.6
GTF3C2-209ENST00000470115 SMIM10L2AP0DMW4 78 aa18.76■□□□□ 0.59
GTF3C2-209ENST00000470115 SMIM10L2BP0DMW5 78 aa18.76■□□□□ 0.59
GTF3C2-209ENST00000470115 ACTN1P12814 892 aa18.76■□□□□ 0.59
GTF3C2-209ENST00000470115 KCNA2P16389 499 aa18.76■□□□□ 0.59
GTF3C2-209ENST00000470115 RABGGTBP53611 331 aa18.76■□□□□ 0.59
GTF3C2-209ENST00000470115 RBL2Q08999 1139 aa18.76■□□□□ 0.59
GTF3C2-209ENST00000470115 MTMR1Q13613 665 aa18.76■□□□□ 0.59
GTF3C2-209ENST00000470115 GPNMBQ14956 572 aa18.76■□□□□ 0.59
GTF3C2-209ENST00000470115 RAB30Q15771 203 aa18.76■□□□□ 0.59
GTF3C2-209ENST00000470115 TRIM71Q2Q1W2 868 aaKnown RBP18.76■□□□□ 0.59
GTF3C2-209ENST00000470115 LRRC8DQ7L1W4 858 aa18.76■□□□□ 0.59
GTF3C2-209ENST00000470115 TRIM50Q86XT4 487 aa18.76■□□□□ 0.59
GTF3C2-209ENST00000470115 RNPEPQ9H4A4 650 aa18.76■□□□□ 0.59
GTF3C2-209ENST00000470115 JADE2Q9NQC1 790 aa18.76■□□□□ 0.59
GTF3C2-209ENST00000470115 TMEM260Q9NX78 707 aa18.76■□□□□ 0.59
GTF3C2-209ENST00000470115 C17orf102A2RUQ5 167 aa18.75■□□□□ 0.59
GTF3C2-209ENST00000470115 FOSP01100 380 aaPredicted RBP18.75■□□□□ 0.59
GTF3C2-209ENST00000470115 SCG2P13521 617 aa18.75■□□□□ 0.59
GTF3C2-209ENST00000470115 ATP2A2P16615 1042 aaKnown RBP18.75■□□□□ 0.59
GTF3C2-209ENST00000470115 PFKFB3Q16875 520 aaPredicted RBP18.75■□□□□ 0.59
GTF3C2-209ENST00000470115 ZNF618Q5T7W0 954 aa18.75■□□□□ 0.59
GTF3C2-209ENST00000470115 RUFY3Q7L099 469 aa18.75■□□□□ 0.59
GTF3C2-209ENST00000470115 TEX2Q8IWB9 1127 aa18.75■□□□□ 0.59
GTF3C2-209ENST00000470115 PHKBQ93100 1093 aa18.75■□□□□ 0.59
GTF3C2-209ENST00000470115 MXRA8Q9BRK3 442 aa18.75■□□□□ 0.59
GTF3C2-209ENST00000470115 ANO3Q9BYT9 981 aa18.75■□□□□ 0.59
GTF3C2-209ENST00000470115 NKX2-4Q9H2Z4 354 aa18.75■□□□□ 0.59
GTF3C2-209ENST00000470115 ZSWIM6Q9HCJ5 1215 aa18.75■□□□□ 0.59
GTF3C2-209ENST00000470115 YBX2Q9Y2T7 364 aaKnown RBP18.75■□□□□ 0.59
GTF3C2-209ENST00000470115 TET1Q8NFU7 2136 aa18.74■□□□□ 0.59
GTF3C2-209ENST00000470115 TANC1Q9C0D5 1861 aa18.74■□□□□ 0.59
GTF3C2-209ENST00000470115 NID2Q14112 1375 aa18.74■□□□□ 0.59
GTF3C2-209ENST00000470115 RBAK-RBAKDNI3L0D1 243 aa18.74■□□□□ 0.59
GTF3C2-209ENST00000470115 MAFGO15525 162 aa18.74■□□□□ 0.59
GTF3C2-209ENST00000470115 PRPF3O43395 683 aaKnown RBP18.74■□□□□ 0.59
GTF3C2-209ENST00000470115 PPFIA3O75145 1194 aa18.74■□□□□ 0.59
GTF3C2-209ENST00000470115 PDIA3P30101 505 aaKnown RBP18.74■□□□□ 0.59
GTF3C2-209ENST00000470115 PKN1Q16512 942 aa18.74■□□□□ 0.59
GTF3C2-209ENST00000470115 SERINC5Q86VE9 423 aa18.74■□□□□ 0.59
GTF3C2-209ENST00000470115 CYP2W1Q8TAV3 490 aa18.74■□□□□ 0.59
GTF3C2-209ENST00000470115 ATP6V0A1Q93050 837 aa18.74■□□□□ 0.59
GTF3C2-209ENST00000470115 GLT8D2Q9H1C3 349 aa18.74■□□□□ 0.59
GTF3C2-209ENST00000470115 SETD4Q9NVD3 440 aa18.74■□□□□ 0.59
GTF3C2-209ENST00000470115 CYP46A1Q9Y6A2 500 aa18.74■□□□□ 0.59
GTF3C2-209ENST00000470115 GSTTP1A0A1W2PQM5 241 aa18.73■□□□□ 0.59
GTF3C2-209ENST00000470115 TREHO43280 583 aa18.73■□□□□ 0.59
GTF3C2-209ENST00000470115 NBNO60934 754 aa18.73■□□□□ 0.59
GTF3C2-209ENST00000470115 MYOGP15173 224 aa18.73■□□□□ 0.59
GTF3C2-209ENST00000470115 HOXC8P31273 242 aa18.73■□□□□ 0.59
GTF3C2-209ENST00000470115 TCF7P36402 384 aaPredicted RBP18.73■□□□□ 0.59
GTF3C2-209ENST00000470115 CLK2P49760 499 aaKnown RBP18.73■□□□□ 0.59
GTF3C2-209ENST00000470115 EVCP57679 992 aa18.73■□□□□ 0.59
GTF3C2-209ENST00000470115 CCT2P78371 535 aaKnown RBP18.73■□□□□ 0.59
GTF3C2-209ENST00000470115 TOB2Q14106 344 aaPredicted RBP18.73■□□□□ 0.59
GTF3C2-209ENST00000470115 NTRK3Q16288 839 aa18.73■□□□□ 0.59
GTF3C2-209ENST00000470115 JAKMIP3Q5VZ66 844 aa18.73■□□□□ 0.59
GTF3C2-209ENST00000470115 TRAF7Q6Q0C0 670 aa18.73■□□□□ 0.59
GTF3C2-209ENST00000470115 SEPT1Q8WYJ6 367 aa18.73■□□□□ 0.59
GTF3C2-209ENST00000470115 NCOA5Q9HCD5 579 aaKnown RBP18.73■□□□□ 0.59
GTF3C2-209ENST00000470115 KCNH7Q9NS40 1196 aa18.73■□□□□ 0.59
GTF3C2-209ENST00000470115 ZNF215Q9UL58 517 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms