RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 NOP56O00567 594 aaKnown RBP14.29□□□□□ -0.12
SPTLC1-204ENST00000469778 MSH4O15457 936 aa14.29□□□□□ -0.12
SPTLC1-204ENST00000469778 ADCY6O43306 1168 aa14.29□□□□□ -0.12
SPTLC1-204ENST00000469778 MARCH6O60337 910 aa14.29□□□□□ -0.12
SPTLC1-204ENST00000469778 ATP9AO75110 1047 aa14.29□□□□□ -0.12
SPTLC1-204ENST00000469778 FARP2O94887 1054 aaPredicted RBP14.29□□□□□ -0.12
SPTLC1-204ENST00000469778 PGK1P00558 417 aa14.29□□□□□ -0.12
SPTLC1-204ENST00000469778 ARP10275 920 aa14.29□□□□□ -0.12
SPTLC1-204ENST00000469778 SP2Q02086 613 aa14.29□□□□□ -0.12
SPTLC1-204ENST00000469778 EARS2Q5JPH6 523 aaKnown RBP14.29□□□□□ -0.12
SPTLC1-204ENST00000469778 TTC38Q5R3I4 469 aa14.29□□□□□ -0.12
SPTLC1-204ENST00000469778 ATL3Q6DD88 541 aa14.29□□□□□ -0.12
SPTLC1-204ENST00000469778 CCSAPQ6IQ19 270 aaPredicted RBP14.29□□□□□ -0.12
SPTLC1-204ENST00000469778 ZNF746Q6NUN9 644 aaPredicted RBP14.29□□□□□ -0.12
SPTLC1-204ENST00000469778 NECAB2Q7Z6G3 386 aa14.29□□□□□ -0.12
SPTLC1-204ENST00000469778 SEPT1Q8WYJ6 367 aa14.29□□□□□ -0.12
SPTLC1-204ENST00000469778 KCNMB3Q9NPA1 279 aa14.29□□□□□ -0.12
SPTLC1-204ENST00000469778 FOXD4L1Q9NU39 408 aa14.29□□□□□ -0.12
SPTLC1-204ENST00000469778 SLC9A2Q9UBY0 812 aa14.29□□□□□ -0.12
SPTLC1-204ENST00000469778 PHF24Q9UPV7 400 aa14.29□□□□□ -0.12
SPTLC1-204ENST00000469778 ELP1O95163 1332 aa14.29□□□□□ -0.12
SPTLC1-204ENST00000469778 LRRC37A2A6NM11 1700 aa14.29□□□□□ -0.12
SPTLC1-204ENST00000469778 CTAGE5O15320 804 aa14.28□□□□□ -0.12
SPTLC1-204ENST00000469778 DHX15O43143 795 aaKnown RBP14.28□□□□□ -0.12
SPTLC1-204ENST00000469778 NEMFO60524 1076 aa14.28□□□□□ -0.12
SPTLC1-204ENST00000469778 TDP2O95551 362 aa14.28□□□□□ -0.12
SPTLC1-204ENST00000469778 SFNP31947 248 aa14.28□□□□□ -0.12
SPTLC1-204ENST00000469778 CYFIP1Q7L576 1253 aa14.28□□□□□ -0.12
SPTLC1-204ENST00000469778 ETNPPLQ8TBG4 499 aa14.28□□□□□ -0.12
SPTLC1-204ENST00000469778 AFG1LQ8WV93 481 aa14.28□□□□□ -0.12
SPTLC1-204ENST00000469778 ZFP91Q96JP5 570 aaPredicted RBP14.28□□□□□ -0.12
SPTLC1-204ENST00000469778 GLT1D1Q96MS3 346 aa14.28□□□□□ -0.12
SPTLC1-204ENST00000469778 CEP131Q9UPN4 1083 aa14.28□□□□□ -0.12
SPTLC1-204ENST00000469778 ATP6V1DQ9Y5K8 247 aa14.28□□□□□ -0.12
SPTLC1-204ENST00000469778 KIAA0100Q14667 2235 aaKnown RBP14.27□□□□□ -0.12
SPTLC1-204ENST00000469778 KIF28PB7ZC32 967 aa14.27□□□□□ -0.13
SPTLC1-204ENST00000469778 GAS7O60861 476 aa14.27□□□□□ -0.13
SPTLC1-204ENST00000469778 ATG7O95352 703 aa14.27□□□□□ -0.13
SPTLC1-204ENST00000469778 ZSCAN22P10073 491 aaPredicted RBP14.27□□□□□ -0.13
SPTLC1-204ENST00000469778 PRPHP41219 470 aa14.27□□□□□ -0.13
SPTLC1-204ENST00000469778 SLC26A2P50443 739 aa14.27□□□□□ -0.13
SPTLC1-204ENST00000469778 ACLYP53396 1101 aa14.27□□□□□ -0.13
SPTLC1-204ENST00000469778 NUCB2P80303 420 aa14.27□□□□□ -0.13
SPTLC1-204ENST00000469778 ITGB3BPQ13352 177 aaPredicted RBP14.27□□□□□ -0.13
SPTLC1-204ENST00000469778 KCNA10Q16322 511 aa14.27□□□□□ -0.13
SPTLC1-204ENST00000469778 CALCRLQ16602 461 aa14.27□□□□□ -0.13
SPTLC1-204ENST00000469778 LRCH2Q5VUJ6 765 aa14.27□□□□□ -0.13
SPTLC1-204ENST00000469778 ANO1Q5XXA6 986 aa14.27□□□□□ -0.13
SPTLC1-204ENST00000469778 MTMR9Q96QG7 549 aa14.27□□□□□ -0.13
SPTLC1-204ENST00000469778 GPR20Q99678 358 aa14.27□□□□□ -0.13
SPTLC1-204ENST00000469778 MTG1Q9BT17 334 aaPredicted RBP14.27□□□□□ -0.13
SPTLC1-204ENST00000469778 KATNAL1Q9BW62 490 aa14.27□□□□□ -0.13
SPTLC1-204ENST00000469778 TEKT3Q9BXF9 490 aa14.27□□□□□ -0.13
SPTLC1-204ENST00000469778 PCDHA12Q9UN75 941 aa14.27□□□□□ -0.13
SPTLC1-204ENST00000469778 STK24Q9Y6E0 443 aa14.27□□□□□ -0.13
SPTLC1-204ENST00000469778 MYH7BA7E2Y1 1941 aa14.26□□□□□ -0.13
SPTLC1-204ENST00000469778 POTEFA5A3E0 1075 aa14.26□□□□□ -0.13
SPTLC1-204ENST00000469778 FAM205CA6NFA0 338 aa14.26□□□□□ -0.13
SPTLC1-204ENST00000469778 PSMD10O75832 226 aa14.26□□□□□ -0.13
SPTLC1-204ENST00000469778 ASGR1P07306 291 aa14.26□□□□□ -0.13
SPTLC1-204ENST00000469778 MMP3P08254 477 aa14.26□□□□□ -0.13
SPTLC1-204ENST00000469778 COL6A1P12109 1028 aa14.26□□□□□ -0.13
SPTLC1-204ENST00000469778 EN2P19622 333 aaPredicted RBP14.26□□□□□ -0.13
SPTLC1-204ENST00000469778 TOB1P50616 345 aaPredicted RBP14.26□□□□□ -0.13
SPTLC1-204ENST00000469778 JAK3P52333 1124 aa14.26□□□□□ -0.13
SPTLC1-204ENST00000469778 PPP2R5CQ13362 524 aa14.26□□□□□ -0.13
SPTLC1-204ENST00000469778 HSDL1Q3SXM5 330 aa14.26□□□□□ -0.13
SPTLC1-204ENST00000469778 GJC2Q5T442 439 aaPredicted RBP14.26□□□□□ -0.13
SPTLC1-204ENST00000469778 C1orf53Q5VUE5 145 aa14.26□□□□□ -0.13
SPTLC1-204ENST00000469778 ARL6IP4Q66PJ3 421 aaKnown RBP14.26□□□□□ -0.13
SPTLC1-204ENST00000469778 MIS18BP1Q6P0N0 1132 aa14.26□□□□□ -0.13
SPTLC1-204ENST00000469778 UBE2Q1Q7Z7E8 422 aa14.26□□□□□ -0.13
SPTLC1-204ENST00000469778 COPS5Q92905 334 aa14.26□□□□□ -0.13
SPTLC1-204ENST00000469778 ZNF396Q96N95 335 aaPredicted RBP14.26□□□□□ -0.13
SPTLC1-204ENST00000469778 RAB34Q9BZG1 259 aa14.26□□□□□ -0.13
SPTLC1-204ENST00000469778 SMARCAD1Q9H4L7 1026 aa14.26□□□□□ -0.13
SPTLC1-204ENST00000469778 ZNF215Q9UL58 517 aaPredicted RBP14.26□□□□□ -0.13
SPTLC1-204ENST00000469778 PCDHA10Q9Y5I2 948 aa14.26□□□□□ -0.13
SPTLC1-204ENST00000469778 MORC2Q9Y6X9 1032 aaPredicted RBP14.26□□□□□ -0.13
SPTLC1-204ENST00000469778 WDR64B1ANS9 1081 aa14.25□□□□□ -0.13
SPTLC1-204ENST00000469778 SLC37A4O43826 429 aa14.25□□□□□ -0.13
SPTLC1-204ENST00000469778 DKC1O60832 514 aaKnown RBP eCLIP14.25□□□□□ -0.13
SPTLC1-204ENST00000469778 PSAPP07602 524 aa14.25□□□□□ -0.13
SPTLC1-204ENST00000469778 ATP2B1P20020 1258 aa14.25□□□□□ -0.13
SPTLC1-204ENST00000469778 MCM7P33993 719 aa14.25□□□□□ -0.13
SPTLC1-204ENST00000469778 MNX1P50219 401 aaPredicted RBP14.25□□□□□ -0.13
SPTLC1-204ENST00000469778 ACTR2P61160 394 aa14.25□□□□□ -0.13
SPTLC1-204ENST00000469778 PURAQ00577 322 aaKnown RBP14.25□□□□□ -0.13
SPTLC1-204ENST00000469778 PTPN11Q06124 597 aaPredicted RBP14.25□□□□□ -0.13
SPTLC1-204ENST00000469778 RESTQ13127 1097 aa14.25□□□□□ -0.13
SPTLC1-204ENST00000469778 PDIA5Q14554 519 aa14.25□□□□□ -0.13
SPTLC1-204ENST00000469778 TMEM63BQ5T3F8 832 aa14.25□□□□□ -0.13
SPTLC1-204ENST00000469778 PLPPR4Q7Z2D5 763 aa14.25□□□□□ -0.13
SPTLC1-204ENST00000469778 SPRYD3Q8NCJ5 442 aa14.25□□□□□ -0.13
SPTLC1-204ENST00000469778 HAS1Q92839 578 aa14.25□□□□□ -0.13
SPTLC1-204ENST00000469778 LENG1Q96BZ8 264 aaPredicted RBP14.25□□□□□ -0.13
SPTLC1-204ENST00000469778 C11orf49Q9H6J7 331 aa14.25□□□□□ -0.13
SPTLC1-204ENST00000469778 AZI2Q9H6S1 392 aa14.25□□□□□ -0.13
SPTLC1-204ENST00000469778 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.25□□□□□ -0.13
SPTLC1-204ENST00000469778 CIZ1Q9ULV3 898 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms