RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 STIM1Q13586 685 aa10.91□□□□□ -0.66
NUP50-214ENST00000469163 LETM2Q2VYF4 491 aa10.91□□□□□ -0.66
NUP50-214ENST00000469163 TRIM68Q6AZZ1 485 aa10.91□□□□□ -0.66
NUP50-214ENST00000469163 SARM1Q6SZW1 724 aa10.91□□□□□ -0.66
NUP50-214ENST00000469163 C11orf57Q6ZUT1 292 aaPredicted RBP10.91□□□□□ -0.66
NUP50-214ENST00000469163 FSIP1Q8NA03 581 aa10.91□□□□□ -0.66
NUP50-214ENST00000469163 ATRIPQ8WXE1 791 aa10.91□□□□□ -0.66
NUP50-214ENST00000469163 DTNBP1Q96EV8 351 aa10.91□□□□□ -0.66
NUP50-214ENST00000469163 CNOT7Q9UIV1 285 aaKnown RBP10.91□□□□□ -0.66
NUP50-214ENST00000469163 TACC3Q9Y6A5 838 aa10.91□□□□□ -0.66
NUP50-214ENST00000469163 ITGB4P16144 1822 aa10.91□□□□□ -0.66
NUP50-214ENST00000469163 NWD2Q9ULI1 1742 aa10.91□□□□□ -0.66
NUP50-214ENST00000469163 H7C1D1 291 aa10.91□□□□□ -0.66
NUP50-214ENST00000469163 DIAPH2O60879 1101 aa10.91□□□□□ -0.66
NUP50-214ENST00000469163 ZNF394Q53GI3 561 aa10.91□□□□□ -0.66
NUP50-214ENST00000469163 PODNQ7Z5L7 613 aa10.91□□□□□ -0.66
NUP50-214ENST00000469163 SRGAP1Q7Z6B7 1085 aa10.91□□□□□ -0.66
NUP50-214ENST00000469163 GPIHBP1Q8IV16 184 aa10.91□□□□□ -0.66
NUP50-214ENST00000469163 OXER1Q8TDS5 423 aa10.91□□□□□ -0.66
NUP50-214ENST00000469163 GJA10Q969M2 543 aa10.91□□□□□ -0.66
NUP50-214ENST00000469163 USP28Q96RU2 1077 aa10.91□□□□□ -0.66
NUP50-214ENST00000469163 ZBTB21Q9ULJ3 1066 aa10.91□□□□□ -0.66
NUP50-214ENST00000469163 SHOX2O60902 331 aaPredicted RBP10.9□□□□□ -0.66
NUP50-214ENST00000469163 PRPF6O94906 941 aaKnown RBP10.9□□□□□ -0.66
NUP50-214ENST00000469163 PTPN21Q16825 1174 aa10.9□□□□□ -0.66
NUP50-214ENST00000469163 NUGGCQ68CJ6 796 aa10.9□□□□□ -0.66
NUP50-214ENST00000469163 MB21D2Q8IYB1 491 aaPredicted RBP10.9□□□□□ -0.66
NUP50-214ENST00000469163 ZNF287Q9HBT7 754 aa10.9□□□□□ -0.66
NUP50-214ENST00000469163 NOD2Q9HC29 1040 aa10.9□□□□□ -0.66
NUP50-214ENST00000469163 CCDC194A0A1B0GVG4 234 aa10.9□□□□□ -0.66
NUP50-214ENST00000469163 YDJCA8MPS7 323 aa10.9□□□□□ -0.66
NUP50-214ENST00000469163 KIF5BP33176 963 aa10.9□□□□□ -0.66
NUP50-214ENST00000469163 DMPKQ09013 629 aa10.9□□□□□ -0.66
NUP50-214ENST00000469163 KARSQ15046 597 aaKnown RBP10.9□□□□□ -0.66
NUP50-214ENST00000469163 PNMA8AQ86V59 439 aaPredicted RBP10.9□□□□□ -0.66
NUP50-214ENST00000469163 CCAR1Q8IX12 1150 aaKnown RBP10.9□□□□□ -0.66
NUP50-214ENST00000469163 AOPEPQ8N6M6 819 aa10.9□□□□□ -0.66
NUP50-214ENST00000469163 CLIP3Q96DZ5 547 aa10.9□□□□□ -0.66
NUP50-214ENST00000469163 SH2B2O14492 632 aaPredicted RBP10.89□□□□□ -0.67
NUP50-214ENST00000469163 GFPT2O94808 682 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 MYCP01106 439 aaPredicted RBP10.89□□□□□ -0.67
NUP50-214ENST00000469163 PLCG2P16885 1265 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 LMOD1P29536 600 aaPredicted RBP10.89□□□□□ -0.67
NUP50-214ENST00000469163 IFFO1Q0D2I5 559 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 ST3GAL1Q11201 340 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 CBX3Q13185 183 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 KIAA0753Q2KHM9 967 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 TSR1Q2NL82 804 aaKnown RBP10.89□□□□□ -0.67
NUP50-214ENST00000469163 MAGEC3Q8TD91 643 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 SPIRE2Q8WWL2 714 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 DUSP9Q99956 384 aaKnown RBP10.89□□□□□ -0.67
NUP50-214ENST00000469163 DDX19AQ9NUU7 478 aaKnown RBP10.89□□□□□ -0.67
NUP50-214ENST00000469163 ZNF510Q9Y2H8 683 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 CLIC4Q9Y696 253 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 RASSF10A6NK89 507 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 SUPT3HO75486 399 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 ZNF76P36508 570 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 FLT3P36888 993 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 EPS15P42566 896 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 ATP1A2P50993 1020 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 PLCB4Q15147 1175 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 CRY2Q49AN0 593 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 ANGEL2Q5VTE6 544 aaKnown RBP10.89□□□□□ -0.67
NUP50-214ENST00000469163 CCDC70Q6NSX1 233 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 RTKN2Q8IZC4 609 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 MAIP1Q8WWC4 291 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 LY9Q9HBG7 655 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 ATP8A2Q9NTI2 1148 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 ARPP21Q9UBL0 812 aaPredicted RBP10.89□□□□□ -0.67
NUP50-214ENST00000469163 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.89□□□□□ -0.67
NUP50-214ENST00000469163 EIF3FO00303 357 aaPredicted RBP10.89□□□□□ -0.67
NUP50-214ENST00000469163 PEX10O60683 326 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 TRIM21P19474 475 aaKnown RBP10.89□□□□□ -0.67
NUP50-214ENST00000469163 RPL13P26373 211 aaKnown RBP10.89□□□□□ -0.67
NUP50-214ENST00000469163 HIBCHQ6NVY1 386 aaPredicted RBP10.89□□□□□ -0.67
NUP50-214ENST00000469163 CEP128Q6ZU80 1094 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 PIGSQ96S52 555 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 IFNKQ9P0W0 207 aa10.89□□□□□ -0.67
NUP50-214ENST00000469163 VWA3AA6NCI4 1184 aa10.88□□□□□ -0.67
NUP50-214ENST00000469163 TMEM232C9JQI7 657 aa10.88□□□□□ -0.67
NUP50-214ENST00000469163 CFBP00751 764 aa10.88□□□□□ -0.67
NUP50-214ENST00000469163 ECE1P42892 770 aa10.88□□□□□ -0.67
NUP50-214ENST00000469163 DYNC1I2Q13409 638 aaKnown RBP10.88□□□□□ -0.67
NUP50-214ENST00000469163 SLC30A10Q6XR72 485 aa10.88□□□□□ -0.67
NUP50-214ENST00000469163 MOB2Q70IA6 237 aa10.88□□□□□ -0.67
NUP50-214ENST00000469163 PCMTD2Q9NV79 361 aa10.88□□□□□ -0.67
NUP50-214ENST00000469163 ATP8A1Q9Y2Q0 1164 aa10.88□□□□□ -0.67
NUP50-214ENST00000469163 DDX39AO00148 427 aaKnown RBP10.88□□□□□ -0.67
NUP50-214ENST00000469163 HOXA13P31271 388 aaPredicted RBP10.88□□□□□ -0.67
NUP50-214ENST00000469163 FAM160A1Q05DH4 1040 aa10.88□□□□□ -0.67
NUP50-214ENST00000469163 PPP1R7Q15435 360 aa10.88□□□□□ -0.67
NUP50-214ENST00000469163 ABCB5Q2M3G0 1257 aa10.88□□□□□ -0.67
NUP50-214ENST00000469163 USP33Q8TEY7 942 aa10.88□□□□□ -0.67
NUP50-214ENST00000469163 DDX27Q96GQ7 796 aaKnown RBP10.88□□□□□ -0.67
NUP50-214ENST00000469163 TMEM47Q9BQJ4 181 aa10.88□□□□□ -0.67
NUP50-214ENST00000469163 TM6SF1Q9BZW5 370 aa10.88□□□□□ -0.67
NUP50-214ENST00000469163 IMPACTQ9P2X3 320 aa10.88□□□□□ -0.67
NUP50-214ENST00000469163 CTDNEP1O95476 244 aa10.88□□□□□ -0.67
NUP50-214ENST00000469163 LDHAP00338 332 aaKnown RBP10.88□□□□□ -0.67
NUP50-214ENST00000469163 PPARDQ03181 441 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms