RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 VMACQ2NL98 169 aa5.64□□□□□ -1.51
VPS50-209ENST00000467326 OTOP3Q7RTS5 596 aa5.64□□□□□ -1.51
VPS50-209ENST00000467326 SAPCD2Q86UD0 394 aa5.64□□□□□ -1.51
VPS50-209ENST00000467326 SP8Q8IXZ3 490 aa5.64□□□□□ -1.51
VPS50-209ENST00000467326 NOX5Q96PH1 765 aa5.64□□□□□ -1.51
VPS50-209ENST00000467326 GORASP1Q9BQQ3 440 aa5.64□□□□□ -1.51
VPS50-209ENST00000467326 SMOC1Q9H4F8 434 aa5.64□□□□□ -1.51
VPS50-209ENST00000467326 NGRNQ9NPE2 291 aaKnown RBP5.64□□□□□ -1.51
VPS50-209ENST00000467326 SFMBT1Q9UHJ3 866 aa5.64□□□□□ -1.51
VPS50-209ENST00000467326 FFAR3O14843 346 aa5.63□□□□□ -1.51
VPS50-209ENST00000467326 HMGB1P09429 215 aaKnown RBP5.63□□□□□ -1.51
VPS50-209ENST00000467326 NKX3-2P78367 333 aa5.63□□□□□ -1.51
VPS50-209ENST00000467326 GUCY1A3Q02108 690 aa5.63□□□□□ -1.51
VPS50-209ENST00000467326 CCDC144BQ3MJ40 725 aa5.63□□□□□ -1.51
VPS50-209ENST00000467326 HABP4Q5JVS0 413 aaKnown RBP5.63□□□□□ -1.51
VPS50-209ENST00000467326 TTLL11Q8NHH1 800 aa5.63□□□□□ -1.51
VPS50-209ENST00000467326 UHMK1Q8TAS1 419 aaKnown RBP5.63□□□□□ -1.51
VPS50-209ENST00000467326 ZBTB8AQ96BR9 441 aa5.63□□□□□ -1.51
VPS50-209ENST00000467326 TOE1Q96GM8 510 aaKnown RBP5.63□□□□□ -1.51
VPS50-209ENST00000467326 SLC52A2Q9HAB3 445 aa5.63□□□□□ -1.51
VPS50-209ENST00000467326 ASH2LQ9UBL3 628 aa5.63□□□□□ -1.51
VPS50-209ENST00000467326 NDOR1Q9UHB4 597 aa5.63□□□□□ -1.51
VPS50-209ENST00000467326 NUB1Q9Y5A7 615 aa5.63□□□□□ -1.51
VPS50-209ENST00000467326 SH3D21A4FU49 640 aa5.62□□□□□ -1.51
VPS50-209ENST00000467326 ARVCFO00192 962 aa5.62□□□□□ -1.51
VPS50-209ENST00000467326 SLC27A2O14975 620 aa5.62□□□□□ -1.51
VPS50-209ENST00000467326 COL6A2P12110 1019 aa5.62□□□□□ -1.51
VPS50-209ENST00000467326 ITGA1P56199 1179 aa5.62□□□□□ -1.51
VPS50-209ENST00000467326 DLX2Q07687 328 aaPredicted RBP5.62□□□□□ -1.51
VPS50-209ENST00000467326 SMAD4Q13485 552 aaKnown RBP5.62□□□□□ -1.51
VPS50-209ENST00000467326 CR1LQ2VPA4 569 aa5.62□□□□□ -1.51
VPS50-209ENST00000467326 TEPPQ6URK8 271 aa5.62□□□□□ -1.51
VPS50-209ENST00000467326 LIPIQ6XZB0 460 aa5.62□□□□□ -1.51
VPS50-209ENST00000467326 TRIM48Q8IWZ4 208 aa5.62□□□□□ -1.51
VPS50-209ENST00000467326 LILRB2Q8N423 598 aa5.62□□□□□ -1.51
VPS50-209ENST00000467326 LINC00482Q8N8I6 264 aa5.62□□□□□ -1.51
VPS50-209ENST00000467326 KCNC2Q96PR1 638 aa5.62□□□□□ -1.51
VPS50-209ENST00000467326 C11orf84Q9BUA3 381 aaPredicted RBP5.62□□□□□ -1.51
VPS50-209ENST00000467326 NTMQ9P121 344 aa5.62□□□□□ -1.51
VPS50-209ENST00000467326 PCDHA8Q9Y5H6 950 aa5.62□□□□□ -1.51
VPS50-209ENST00000467326 CCDC163A0A0D9SF12 145 aa5.61□□□□□ -1.51
VPS50-209ENST00000467326 A0A1B0GTL3 188 aa5.61□□□□□ -1.51
VPS50-209ENST00000467326 WNT9AO14904 365 aa5.61□□□□□ -1.51
VPS50-209ENST00000467326 NKRFO15226 690 aaKnown RBP eCLIP5.61□□□□□ -1.51
VPS50-209ENST00000467326 SMARCA5O60264 1052 aaPredicted RBP5.61□□□□□ -1.51
VPS50-209ENST00000467326 EFCAB14O75071 495 aa5.61□□□□□ -1.51
VPS50-209ENST00000467326 CRTAMO95727 393 aa5.61□□□□□ -1.51
VPS50-209ENST00000467326 APPP05067 770 aa5.61□□□□□ -1.51
VPS50-209ENST00000467326 THBS2P35442 1172 aa5.61□□□□□ -1.51
VPS50-209ENST00000467326 TUSC3Q13454 348 aa5.61□□□□□ -1.51
VPS50-209ENST00000467326 TRIM61Q5EBN2 209 aa5.61□□□□□ -1.51
VPS50-209ENST00000467326 ZC3H7AQ8IWR0 971 aaKnown RBP5.61□□□□□ -1.51
VPS50-209ENST00000467326 ADGRG2Q8IZP9 1017 aa5.61□□□□□ -1.51
VPS50-209ENST00000467326 MARCH10Q8NA82 808 aaPredicted RBP5.61□□□□□ -1.51
VPS50-209ENST00000467326 TP53I13Q8NBR0 393 aaPredicted RBP5.61□□□□□ -1.51
VPS50-209ENST00000467326 GSTCDQ8NEC7 633 aa5.61□□□□□ -1.51
VPS50-209ENST00000467326 CXorf38Q8TB03 319 aa5.61□□□□□ -1.51
VPS50-209ENST00000467326 ZNF526Q8TF50 670 aaPredicted RBP5.61□□□□□ -1.51
VPS50-209ENST00000467326 SYT3Q9BQG1 590 aa5.61□□□□□ -1.51
VPS50-209ENST00000467326 LUC7LQ9NQ29 371 aaKnown RBP5.61□□□□□ -1.51
VPS50-209ENST00000467326 DSEQ9UL01 958 aa5.61□□□□□ -1.51
VPS50-209ENST00000467326 SHROOM4Q9ULL8 1493 aa5.61□□□□□ -1.51
VPS50-209ENST00000467326 SASH1O94885 1247 aa5.6□□□□□ -1.51
VPS50-209ENST00000467326 GRIN1Q05586 938 aa5.6□□□□□ -1.51
VPS50-209ENST00000467326 FAM47CQ5HY64 1035 aa5.6□□□□□ -1.51
VPS50-209ENST00000467326 KCTD1Q719H9 257 aa5.6□□□□□ -1.51
VPS50-209ENST00000467326 BRAPQ7Z569 592 aa5.6□□□□□ -1.51
VPS50-209ENST00000467326 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.6□□□□□ -1.51
VPS50-209ENST00000467326 KYQ8NBH2 561 aa5.6□□□□□ -1.51
VPS50-209ENST00000467326 PCDH19Q8TAB3 1148 aa5.6□□□□□ -1.51
VPS50-209ENST00000467326 FBXW5Q969U6 566 aa5.6□□□□□ -1.51
VPS50-209ENST00000467326 MRPL4Q9BYD3 311 aaKnown RBP5.6□□□□□ -1.51
VPS50-209ENST00000467326 CD244Q9BZW8 370 aa5.6□□□□□ -1.51
VPS50-209ENST00000467326 NCOA5Q9HCD5 579 aaKnown RBP5.6□□□□□ -1.51
VPS50-209ENST00000467326 RTEL1Q9NZ71 1219 aa5.6□□□□□ -1.51
VPS50-209ENST00000467326 PCDHA9Q9Y5H5 950 aa5.6□□□□□ -1.51
VPS50-209ENST00000467326 RASGRP1O95267 797 aa5.59□□□□□ -1.51
VPS50-209ENST00000467326 LRG1P02750 347 aa5.59□□□□□ -1.51
VPS50-209ENST00000467326 LTFP02788 710 aa5.59□□□□□ -1.51
VPS50-209ENST00000467326 SLURP1P55000 103 aa5.59□□□□□ -1.51
VPS50-209ENST00000467326 ST5P78524 1137 aa5.59□□□□□ -1.51
VPS50-209ENST00000467326 ADAM9Q13443 819 aa5.59□□□□□ -1.51
VPS50-209ENST00000467326 TTLL7Q6ZT98 887 aa5.59□□□□□ -1.51
VPS50-209ENST00000467326 PRRT2Q7Z6L0 340 aaPredicted RBP5.59□□□□□ -1.51
VPS50-209ENST00000467326 STK32CQ86UX6 486 aa5.59□□□□□ -1.51
VPS50-209ENST00000467326 RBM12BQ8IXT5 1001 aaKnown RBP5.59□□□□□ -1.51
VPS50-209ENST00000467326 CARFQ8N187 725 aa5.59□□□□□ -1.51
VPS50-209ENST00000467326 TTLL6Q8N841 843 aa5.59□□□□□ -1.51
VPS50-209ENST00000467326 SH3TC2Q8TF17 1288 aa5.59□□□□□ -1.51
VPS50-209ENST00000467326 ZSWIM3Q96MP5 696 aa5.59□□□□□ -1.51
VPS50-209ENST00000467326 WRNIP1Q96S55 665 aa5.59□□□□□ -1.51
VPS50-209ENST00000467326 SPATA25Q9BR10 227 aa5.59□□□□□ -1.51
VPS50-209ENST00000467326 PIF1Q9H611 641 aa5.59□□□□□ -1.51
VPS50-209ENST00000467326 CATSPERZQ9NTU4 200 aa5.59□□□□□ -1.51
VPS50-209ENST00000467326 SPATA6Q9NWH7 488 aaPredicted RBP5.59□□□□□ -1.51
VPS50-209ENST00000467326 SRPK3Q9UPE1 567 aa5.59□□□□□ -1.51
VPS50-209ENST00000467326 TELO2Q9Y4R8 837 aa5.59□□□□□ -1.51
VPS50-209ENST00000467326 A0A0G2JLL6 359 aaPredicted RBP5.58□□□□□ -1.52
VPS50-209ENST00000467326 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.58□□□□□ -1.52
VPS50-209ENST00000467326 CCDC66A2RUB6 948 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms