RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 PANK2Q9BZ23 570 aa16.66■□□□□ 0.26
DDX56-208ENST00000467318 SCAND2PQ9GZW5 306 aaPredicted RBP16.66■□□□□ 0.26
DDX56-208ENST00000467318 NFASCO94856 1347 aa16.66■□□□□ 0.26
DDX56-208ENST00000467318 SEPT4O43236 478 aa16.65■□□□□ 0.26
DDX56-208ENST00000467318 OR52Z1P0C646 297 aa16.65■□□□□ 0.26
DDX56-208ENST00000467318 KCNA2P16389 499 aa16.65■□□□□ 0.26
DDX56-208ENST00000467318 ADCYAP1R1P41586 468 aa16.65■□□□□ 0.26
DDX56-208ENST00000467318 TNFAIP2Q03169 654 aa16.65■□□□□ 0.26
DDX56-208ENST00000467318 CEBPZQ03701 1054 aaKnown RBP16.65■□□□□ 0.26
DDX56-208ENST00000467318 PTPAQ15257 358 aa16.65■□□□□ 0.26
DDX56-208ENST00000467318 DUSP28Q4G0W2 176 aa16.65■□□□□ 0.26
DDX56-208ENST00000467318 LINC00301Q8NCQ3 95 aa16.65■□□□□ 0.26
DDX56-208ENST00000467318 HAS1Q92839 578 aa16.65■□□□□ 0.26
DDX56-208ENST00000467318 SLC5A5Q92911 643 aa16.65■□□□□ 0.26
DDX56-208ENST00000467318 SDF4Q9BRK5 362 aa16.65■□□□□ 0.26
DDX56-208ENST00000467318 FTOQ9C0B1 505 aaKnown RBP eCLIP16.65■□□□□ 0.26
DDX56-208ENST00000467318 TMEM60Q9H2L4 133 aa16.65■□□□□ 0.26
DDX56-208ENST00000467318 PCDHA12Q9UN75 941 aa16.65■□□□□ 0.26
DDX56-208ENST00000467318 BRCA2P51587 3418 aa16.65■□□□□ 0.26
DDX56-208ENST00000467318 MYH15Q9Y2K3 1946 aa16.65■□□□□ 0.26
DDX56-208ENST00000467318 ATP9AO75110 1047 aa16.65■□□□□ 0.26
DDX56-208ENST00000467318 SP2Q02086 613 aa16.65■□□□□ 0.26
DDX56-208ENST00000467318 STK38Q15208 465 aa16.65■□□□□ 0.26
DDX56-208ENST00000467318 LY6KQ17RY6 165 aa16.65■□□□□ 0.26
DDX56-208ENST00000467318 HMX1Q9NP08 348 aaPredicted RBP16.65■□□□□ 0.26
DDX56-208ENST00000467318 Q9Y3F1 56 aa16.65■□□□□ 0.26
DDX56-208ENST00000467318 MSCO60682 206 aa16.64■□□□□ 0.25
DDX56-208ENST00000467318 GAS7O60861 476 aa16.64■□□□□ 0.25
DDX56-208ENST00000467318 PPP6R2O75170 966 aa16.64■□□□□ 0.25
DDX56-208ENST00000467318 PSMD10O75832 226 aa16.64■□□□□ 0.25
DDX56-208ENST00000467318 ARIH2O95376 493 aa16.64■□□□□ 0.25
DDX56-208ENST00000467318 UBA1P22314 1058 aaKnown RBP16.64■□□□□ 0.25
DDX56-208ENST00000467318 CNGA1P29973 690 aa16.64■□□□□ 0.25
DDX56-208ENST00000467318 ZSCAN23Q3MJ62 389 aa16.64■□□□□ 0.25
DDX56-208ENST00000467318 LRCH2Q5VUJ6 765 aa16.64■□□□□ 0.25
DDX56-208ENST00000467318 CAVIN1Q6NZI2 390 aaKnown RBP16.64■□□□□ 0.25
DDX56-208ENST00000467318 METTL7BQ6UX53 244 aa16.64■□□□□ 0.25
DDX56-208ENST00000467318 TRPV1Q8NER1 839 aa16.64■□□□□ 0.25
DDX56-208ENST00000467318 KCNG4Q8TDN1 519 aa16.64■□□□□ 0.25
DDX56-208ENST00000467318 SH3TC2Q8TF17 1288 aa16.64■□□□□ 0.25
DDX56-208ENST00000467318 TTC12Q9H892 705 aaPredicted RBP16.64■□□□□ 0.25
DDX56-208ENST00000467318 TCEAL9Q9UHQ7 104 aa16.64■□□□□ 0.25
DDX56-208ENST00000467318 RCOR1Q9UKL0 485 aa16.64■□□□□ 0.25
DDX56-208ENST00000467318 SPTLC2O15270 562 aa16.63■□□□□ 0.25
DDX56-208ENST00000467318 DHX15O43143 795 aaKnown RBP16.63■□□□□ 0.25
DDX56-208ENST00000467318 SMPD1P17405 629 aa16.63■□□□□ 0.25
DDX56-208ENST00000467318 TXKP42681 527 aa16.63■□□□□ 0.25
DDX56-208ENST00000467318 ITGB3BPQ13352 177 aaPredicted RBP16.63■□□□□ 0.25
DDX56-208ENST00000467318 CELF3Q5SZQ8 465 aaKnown RBP16.63■□□□□ 0.25
DDX56-208ENST00000467318 DTHD1Q6ZMT9 781 aa16.63■□□□□ 0.25
DDX56-208ENST00000467318 FERMT2Q96AC1 680 aa16.63■□□□□ 0.25
DDX56-208ENST00000467318 PPP1R9BQ96SB3 815 aa16.63■□□□□ 0.25
DDX56-208ENST00000467318 TEKT3Q9BXF9 490 aa16.63■□□□□ 0.25
DDX56-208ENST00000467318 RAB34Q9BZG1 259 aa16.63■□□□□ 0.25
DDX56-208ENST00000467318 MLXIPQ9HAP2 919 aa16.63■□□□□ 0.25
DDX56-208ENST00000467318 GNEQ9Y223 722 aaKnown RBP16.63■□□□□ 0.25
DDX56-208ENST00000467318 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.62■□□□□ 0.25
DDX56-208ENST00000467318 DUSP11O75319 330 aaKnown RBP16.62■□□□□ 0.25
DDX56-208ENST00000467318 GGPS1O95749 300 aa16.62■□□□□ 0.25
DDX56-208ENST00000467318 GH1P01241 217 aa16.62■□□□□ 0.25
DDX56-208ENST00000467318 PTGS1P23219 599 aa16.62■□□□□ 0.25
DDX56-208ENST00000467318 LAMC2Q13753 1193 aa16.62■□□□□ 0.25
DDX56-208ENST00000467318 TMEM266Q2M3C6 531 aa16.62■□□□□ 0.25
DDX56-208ENST00000467318 CYFIP1Q7L576 1253 aa16.62■□□□□ 0.25
DDX56-208ENST00000467318 DHX37Q8IY37 1157 aaKnown RBP16.62■□□□□ 0.25
DDX56-208ENST00000467318 EMID1Q96A84 441 aaPredicted RBP16.62■□□□□ 0.25
DDX56-208ENST00000467318 SPATA32Q96LK8 384 aa16.62■□□□□ 0.25
DDX56-208ENST00000467318 UIMC1Q96RL1 719 aa16.62■□□□□ 0.25
DDX56-208ENST00000467318 JPH1Q9HDC5 661 aaPredicted RBP16.62■□□□□ 0.25
DDX56-208ENST00000467318 PKD2L1Q9P0L9 805 aa16.62■□□□□ 0.25
DDX56-208ENST00000467318 FARP2O94887 1054 aaPredicted RBP16.62■□□□□ 0.25
DDX56-208ENST00000467318 RARBP10826 455 aa16.62■□□□□ 0.25
DDX56-208ENST00000467318 CCND3P30281 292 aaPredicted RBP16.62■□□□□ 0.25
DDX56-208ENST00000467318 CLCN1P35523 988 aa16.62■□□□□ 0.25
DDX56-208ENST00000467318 FXR2P51116 673 aaKnown RBP eCLIP16.62■□□□□ 0.25
DDX56-208ENST00000467318 KRT76Q01546 638 aa16.62■□□□□ 0.25
DDX56-208ENST00000467318 PPP2R5CQ13362 524 aa16.62■□□□□ 0.25
DDX56-208ENST00000467318 PDIA5Q14554 519 aa16.62■□□□□ 0.25
DDX56-208ENST00000467318 TMEM63BQ5T3F8 832 aa16.62■□□□□ 0.25
DDX56-208ENST00000467318 SLC9A2Q9UBY0 812 aa16.62■□□□□ 0.25
DDX56-208ENST00000467318 SRPRBQ9Y5M8 271 aaKnown RBP16.62■□□□□ 0.25
DDX56-208ENST00000467318 MYCP01106 439 aaPredicted RBP16.61■□□□□ 0.25
DDX56-208ENST00000467318 MARCKSP29966 332 aaPredicted RBP16.61■□□□□ 0.25
DDX56-208ENST00000467318 TECP42680 631 aa16.61■□□□□ 0.25
DDX56-208ENST00000467318 CSPP1Q1MSJ5 1256 aa16.61■□□□□ 0.25
DDX56-208ENST00000467318 ZNF746Q6NUN9 644 aaPredicted RBP16.61■□□□□ 0.25
DDX56-208ENST00000467318 B3GNT9Q6UX72 402 aa16.61■□□□□ 0.25
DDX56-208ENST00000467318 SMAP1Q8IYB5 467 aaPredicted RBP16.61■□□□□ 0.25
DDX56-208ENST00000467318 LEO1Q8WVC0 666 aaPredicted RBP16.61■□□□□ 0.25
DDX56-208ENST00000467318 GJA10Q969M2 543 aa16.61■□□□□ 0.25
DDX56-208ENST00000467318 ARMC5Q96C12 935 aa16.61■□□□□ 0.25
DDX56-208ENST00000467318 DDX20Q9UHI6 824 aaKnown RBP16.61■□□□□ 0.25
DDX56-208ENST00000467318 TCHHQ07283 1943 aa16.61■□□□□ 0.25
DDX56-208ENST00000467318 ADCY6O43306 1168 aa16.6■□□□□ 0.25
DDX56-208ENST00000467318 SFNP31947 248 aa16.6■□□□□ 0.25
DDX56-208ENST00000467318 ARHGAP1Q07960 439 aa16.6■□□□□ 0.25
DDX56-208ENST00000467318 LRSAM1Q6UWE0 723 aa16.6■□□□□ 0.25
DDX56-208ENST00000467318 TLK2Q86UE8 772 aa16.6■□□□□ 0.25
DDX56-208ENST00000467318 IGSF22Q8N9C0 903 aa16.6■□□□□ 0.25
DDX56-208ENST00000467318 KRI1Q8N9T8 703 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms