RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 JMJD4Q9H9V9 463 aa16.32■□□□□ 0.2
PRPF38B-204ENST00000467302 TMOD2Q9NZR1 351 aa16.32■□□□□ 0.2
PRPF38B-204ENST00000467302 STK17AQ9UEE5 414 aa16.32■□□□□ 0.2
PRPF38B-204ENST00000467302 ARFGEF1Q9Y6D6 1849 aa16.32■□□□□ 0.2
PRPF38B-204ENST00000467302 COL4A5P29400 1685 aa16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 PNMA6FA0A0J9YX94 578 aa16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 TACC1O75410 805 aa16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 KIF11P52732 1056 aa16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 FOXR1Q6PIV2 292 aa16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 REXO1Q8N1G1 1221 aaKnown RBP16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 GUF1Q8N442 669 aaKnown RBP16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 AFAP1L1Q8TED9 768 aa16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 AENQ8WTP8 325 aaKnown RBP16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 RUBCNQ92622 972 aa16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 MKL1Q969V6 931 aa16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 COA7Q96BR5 231 aa16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 PRMT6Q96LA8 375 aaPredicted RBP16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 KANSL2Q9H9L4 492 aa16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 BIN2Q9UBW5 565 aaPredicted RBP16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 HDAC9Q9UKV0 1011 aa16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 EDIL3O43854 480 aa16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 VIL1P09327 827 aaKnown RBP16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 EIF4A3P38919 411 aaKnown RBP16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 MAN2A1Q16706 1144 aa16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 TTBK2Q6IQ55 1244 aa16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 TMEM179Q6ZVK1 233 aa16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 CCDC84Q86UT8 332 aaPredicted RBP16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 GSPT2Q8IYD1 628 aaKnown RBP16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 MLXIPQ9HAP2 919 aa16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 FAM207AQ9NSI2 230 aaPredicted RBP16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 NYAP2Q9P242 653 aa16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 RRP15Q9Y3B9 282 aaKnown RBP16.31■□□□□ 0.2
PRPF38B-204ENST00000467302 EEF2P13639 858 aaKnown RBP16.3■□□□□ 0.2
PRPF38B-204ENST00000467302 GGCXP38435 758 aa16.3■□□□□ 0.2
PRPF38B-204ENST00000467302 TXKP42681 527 aa16.3■□□□□ 0.2
PRPF38B-204ENST00000467302 ADCY7P51828 1080 aa16.3■□□□□ 0.2
PRPF38B-204ENST00000467302 EHHADHQ08426 723 aa16.3■□□□□ 0.2
PRPF38B-204ENST00000467302 LRRC55Q6ZSA7 311 aa16.3■□□□□ 0.2
PRPF38B-204ENST00000467302 KCTD1Q719H9 257 aa16.3■□□□□ 0.2
PRPF38B-204ENST00000467302 BAP1Q92560 729 aa16.3■□□□□ 0.2
PRPF38B-204ENST00000467302 GDAP1L1Q96MZ0 367 aa16.3■□□□□ 0.2
PRPF38B-204ENST00000467302 ZNF277Q9NRM2 450 aaPredicted RBP16.3■□□□□ 0.2
PRPF38B-204ENST00000467302 FAM184BQ9ULE4 1060 aa16.3■□□□□ 0.2
PRPF38B-204ENST00000467302 SPDYE2BA6NHP3 402 aa16.29■□□□□ 0.2
PRPF38B-204ENST00000467302 SPDYE6P0CI01 402 aa16.29■□□□□ 0.2
PRPF38B-204ENST00000467302 TGFB2P61812 414 aa16.29■□□□□ 0.2
PRPF38B-204ENST00000467302 LRRC63Q05C16 580 aa16.29■□□□□ 0.2
PRPF38B-204ENST00000467302 CALCRLQ16602 461 aa16.29■□□□□ 0.2
PRPF38B-204ENST00000467302 ASTE1Q2TB18 679 aaPredicted RBP16.29■□□□□ 0.2
PRPF38B-204ENST00000467302 FOXR2Q6PJQ5 311 aa16.29■□□□□ 0.2
PRPF38B-204ENST00000467302 DCAF4Q8WV16 495 aa16.29■□□□□ 0.2
PRPF38B-204ENST00000467302 RIN2Q8WYP3 895 aaPredicted RBP16.29■□□□□ 0.2
PRPF38B-204ENST00000467302 LARP4BQ92615 738 aaKnown RBP16.29■□□□□ 0.2
PRPF38B-204ENST00000467302 GMLQ99445 158 aa16.29■□□□□ 0.2
PRPF38B-204ENST00000467302 CRACR2AQ9BSW2 395 aa16.29■□□□□ 0.2
PRPF38B-204ENST00000467302 TMEM260Q9NX78 707 aa16.29■□□□□ 0.2
PRPF38B-204ENST00000467302 BRCA1P38398 1863 aaKnown RBP16.29■□□□□ 0.2
PRPF38B-204ENST00000467302 TRIM66O15016 1216 aa16.29■□□□□ 0.2
PRPF38B-204ENST00000467302 PJA2O43164 708 aa16.29■□□□□ 0.2
PRPF38B-204ENST00000467302 RAD17O75943 681 aa16.29■□□□□ 0.2
PRPF38B-204ENST00000467302 MOCS3O95396 460 aa16.29■□□□□ 0.2
PRPF38B-204ENST00000467302 FGFR1OPO95684 399 aaKnown RBP16.29■□□□□ 0.2
PRPF38B-204ENST00000467302 HOXA7P31268 230 aaPredicted RBP16.29■□□□□ 0.2
PRPF38B-204ENST00000467302 SLC16A2P36021 539 aa16.29■□□□□ 0.2
PRPF38B-204ENST00000467302 NIM1KQ8IY84 436 aa16.29■□□□□ 0.2
PRPF38B-204ENST00000467302 GOLGA6L1Q8N7Z2 621 aa16.29■□□□□ 0.2
PRPF38B-204ENST00000467302 SPATA4Q8NEY3 305 aa16.29■□□□□ 0.2
PRPF38B-204ENST00000467302 OSBPL9Q96SU4 736 aa16.29■□□□□ 0.2
PRPF38B-204ENST00000467302 LRRC53A6NM62 1247 aa16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 SLC37A4O43826 429 aa16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 RAD21O60216 631 aa16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 PDIA5Q14554 519 aa16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 SEPT2Q15019 361 aa16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 ABCB5Q2M3G0 1257 aa16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 SHROOM1Q2M3G4 852 aaPredicted RBP16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 CCDC70Q6NSX1 233 aa16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 CCDC125Q86Z20 511 aa16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 OGFOD1Q8N543 542 aa16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 HDAC7Q8WUI4 952 aa16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 RAD54LQ92698 747 aa16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 LRRC1Q9BTT6 524 aa16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 MMRN2Q9H8L6 949 aa16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 PIM2Q9P1W9 311 aa16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 ZNRF3Q9ULT6 936 aa16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 USP17L10C9JJH3 530 aa16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 ZBTB5O15062 677 aa16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 SHOX2O60902 331 aaPredicted RBP16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 TCP1P17987 556 aaKnown RBP16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 ICA1Q05084 483 aa16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 MAPK8IP2Q13387 824 aaPredicted RBP16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 DLGAP5Q15398 846 aa16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 TMEM119Q4V9L6 283 aa16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 SLFN13Q68D06 897 aa16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 RRAGAQ7L523 313 aa16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 EDEM3Q9BZQ6 932 aa16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 RASSF4Q9H2L5 321 aa16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 RIC8AQ9NPQ8 531 aa16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 DMGDHQ9UI17 866 aaKnown RBP16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 HERC5Q9UII4 1024 aaKnown RBP16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 SALL4Q9UJQ4 1053 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms