RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 TKFCQ3LXA3 575 aa10.68□□□□□ -0.7
APOBEC1-202ENST00000467171 KMT5BQ4FZB7 885 aa10.68□□□□□ -0.7
APOBEC1-202ENST00000467171 CEP55Q53EZ4 464 aa10.68□□□□□ -0.7
APOBEC1-202ENST00000467171 CATSPERGQ6ZRH7 1159 aa10.68□□□□□ -0.7
APOBEC1-202ENST00000467171 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.68□□□□□ -0.7
APOBEC1-202ENST00000467171 UNC13DQ70J99 1090 aa10.68□□□□□ -0.7
APOBEC1-202ENST00000467171 FCHSD1Q86WN1 690 aa10.68□□□□□ -0.7
APOBEC1-202ENST00000467171 ADSSL1Q8N142 457 aa10.68□□□□□ -0.7
APOBEC1-202ENST00000467171 DDX12PQ92771 950 aa10.68□□□□□ -0.7
APOBEC1-202ENST00000467171 RRAGDQ9NQL2 400 aaPredicted RBP10.68□□□□□ -0.7
APOBEC1-202ENST00000467171 HOXC10Q9NYD6 342 aa10.68□□□□□ -0.7
APOBEC1-202ENST00000467171 TMOD4Q9NZQ9 345 aa10.68□□□□□ -0.7
APOBEC1-202ENST00000467171 VAV3Q9UKW4 847 aa10.68□□□□□ -0.7
APOBEC1-202ENST00000467171 CTDP1Q9Y5B0 961 aaPredicted RBP10.68□□□□□ -0.7
APOBEC1-202ENST00000467171 SNCAIPQ9Y6H5 919 aa10.68□□□□□ -0.7
APOBEC1-202ENST00000467171 ATP1A3P13637 1013 aa10.67□□□□□ -0.7
APOBEC1-202ENST00000467171 MUTP22033 750 aa10.67□□□□□ -0.7
APOBEC1-202ENST00000467171 RPA1P27694 616 aa10.67□□□□□ -0.7
APOBEC1-202ENST00000467171 CCT6AP40227 531 aaKnown RBP10.67□□□□□ -0.7
APOBEC1-202ENST00000467171 IREB2P48200 963 aaKnown RBP10.67□□□□□ -0.7
APOBEC1-202ENST00000467171 GSDMDP57764 484 aa10.67□□□□□ -0.7
APOBEC1-202ENST00000467171 PAK1Q13153 545 aa10.67□□□□□ -0.7
APOBEC1-202ENST00000467171 STIM1Q13586 685 aa10.67□□□□□ -0.7
APOBEC1-202ENST00000467171 ECM1Q16610 540 aa10.67□□□□□ -0.7
APOBEC1-202ENST00000467171 CDKAL1Q5VV42 579 aa10.67□□□□□ -0.7
APOBEC1-202ENST00000467171 XRRA1Q6P2D8 792 aa10.67□□□□□ -0.7
APOBEC1-202ENST00000467171 FOXR2Q6PJQ5 311 aa10.67□□□□□ -0.7
APOBEC1-202ENST00000467171 CCDC186Q7Z3E2 898 aa10.67□□□□□ -0.7
APOBEC1-202ENST00000467171 KRT26Q7Z3Y9 468 aa10.67□□□□□ -0.7
APOBEC1-202ENST00000467171 DRC7Q8IY82 874 aa10.67□□□□□ -0.7
APOBEC1-202ENST00000467171 SPC24Q8NBT2 197 aa10.67□□□□□ -0.7
APOBEC1-202ENST00000467171 SYTL5Q8TDW5 730 aaPredicted RBP10.67□□□□□ -0.7
APOBEC1-202ENST00000467171 SLC5A5Q92911 643 aa10.67□□□□□ -0.7
APOBEC1-202ENST00000467171 DHTKD1Q96HY7 919 aaPredicted RBP10.67□□□□□ -0.7
APOBEC1-202ENST00000467171 PLIN2Q99541 437 aa10.67□□□□□ -0.7
APOBEC1-202ENST00000467171 POLR3CQ9BUI4 534 aaPredicted RBP10.67□□□□□ -0.7
APOBEC1-202ENST00000467171 XPO4Q9C0E2 1151 aaKnown RBP10.67□□□□□ -0.7
APOBEC1-202ENST00000467171 RAVER2Q9HCJ3 691 aaKnown RBP10.67□□□□□ -0.7
APOBEC1-202ENST00000467171 IFNKQ9P0W0 207 aa10.67□□□□□ -0.7
APOBEC1-202ENST00000467171 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.67□□□□□ -0.7
APOBEC1-202ENST00000467171 DICER1Q9UPY3 1922 aaKnown RBP10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 SYNRGQ9UMZ2 1314 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 IQCA1LA6NCM1 817 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 GLTPD2A6NH11 291 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 MYMKA6NI61 221 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 LRRC10BA6NIK2 292 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 SPDYE16A6NNV3 312 aaPredicted RBP10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 NFIBO00712 420 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 CXCL11O14625 94 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 PSMD10O75832 226 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 SERPINC1P01008 464 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 ALAS1P13196 640 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 EPHX2P34913 555 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 NF2P35240 595 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 HMGCS2P54868 508 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 UBASH3AP57075 661 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 ASIC1P78348 528 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 PPATQ06203 517 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 SPAG1Q07617 926 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 EHHADHQ08426 723 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 PSMD2Q13200 908 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 PPP2R5CQ13362 524 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 DGKZQ13574 1117 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 VGLL4Q14135 290 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 MCM6Q14566 821 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 B3GNT9Q6UX72 402 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 CYP2W1Q8TAV3 490 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 ATG4CQ96DT6 458 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 RIT2Q99578 217 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 MXRA8Q9BRK3 442 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 EXOC1Q9NV70 894 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 CSADQ9Y600 493 aa10.66□□□□□ -0.7
APOBEC1-202ENST00000467171 UNCXA6NJT0 531 aa10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 ADM5C9JUS6 153 aa10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 PSMA7O14818 248 aa10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 SPATA31C1P0DKV0 1188 aa10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 PRCPP42785 496 aa10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 PDE4DQ08499 809 aa10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 PCNX4Q63HM2 1172 aa10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 KLHL10Q6JEL2 608 aa10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 OTOP1Q7RTM1 612 aa10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 KCNK18Q7Z418 384 aa10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 CATSPER3Q86XQ3 398 aa10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 TRMT44Q8IYL2 757 aaKnown RBP10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 SMYD4Q8IYR2 804 aaPredicted RBP10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 CPXCR1Q8N123 301 aa10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 NOC3LQ8WTT2 800 aaKnown RBP10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 NELFBQ8WX92 580 aa10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 GJA10Q969M2 543 aa10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 DNAJC19Q96DA6 116 aa10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 CDCA5Q96FF9 252 aa10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 TRERF1Q96PN7 1200 aa10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 CTAGE1Q96RT6 745 aa10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 HSD17B14Q9BPX1 270 aa10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 TEX13BQ9BXU2 312 aa10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 WDR11Q9BZH6 1224 aa10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 TUFT1Q9NNX1 390 aa10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 SAMSN1Q9NSI8 373 aaKnown RBP10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 COL20A1Q9P218 1284 aa10.65□□□□□ -0.7
APOBEC1-202ENST00000467171 ZNF214Q9UL59 606 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms