RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 ITIH3Q06033 890 aa15.04■□□□□ -0
UBR4-210ENST00000466969 TDGQ13569 410 aa15.04■□□□□ -0
UBR4-210ENST00000466969 FAM160B2Q86V87 743 aa15.04■□□□□ -0
UBR4-210ENST00000466969 DDX1Q92499 740 aaKnown RBP15.04■□□□□ -0
UBR4-210ENST00000466969 ANTXR1Q9H6X2 564 aa15.04■□□□□ -0
UBR4-210ENST00000466969 ATP8A2Q9NTI2 1148 aa15.04■□□□□ -0
UBR4-210ENST00000466969 CDH22Q9UJ99 828 aa15.04■□□□□ -0
UBR4-210ENST00000466969 DUSP12Q9UNI6 340 aa15.04■□□□□ -0
UBR4-210ENST00000466969 LHX6Q9UPM6 363 aa15.04■□□□□ -0
UBR4-210ENST00000466969 CEP295Q9C0D2 2601 aa15.03■□□□□ -0
UBR4-210ENST00000466969 PTPDC1A2A3K4 754 aa15.03■□□□□ -0
UBR4-210ENST00000466969 B4DLN1 442 aa15.03■□□□□ -0
UBR4-210ENST00000466969 DGKIO75912 1065 aa15.03■□□□□ -0
UBR4-210ENST00000466969 ARIH2O95376 493 aa15.03■□□□□ -0
UBR4-210ENST00000466969 MTHFRP42898 656 aa15.03■□□□□ -0
UBR4-210ENST00000466969 MRPL12P52815 198 aaKnown RBP15.03■□□□□ -0
UBR4-210ENST00000466969 PDE12Q6L8Q7 609 aaKnown RBP15.03■□□□□ -0
UBR4-210ENST00000466969 CMTR2Q8IYT2 770 aaKnown RBP15.03■□□□□ -0
UBR4-210ENST00000466969 LCORLQ8N3X6 602 aa15.03■□□□□ -0
UBR4-210ENST00000466969 DDRGK1Q96HY6 314 aa15.03■□□□□ -0
UBR4-210ENST00000466969 ADAM7Q9H2U9 754 aa15.03■□□□□ -0
UBR4-210ENST00000466969 CCPG1Q9ULG6 757 aa15.03■□□□□ -0
UBR4-210ENST00000466969 CAND2O75155 1236 aa15.02■□□□□ -0
UBR4-210ENST00000466969 F2P00734 622 aa15.02■□□□□ -0
UBR4-210ENST00000466969 MTX1Q13505 466 aa15.02■□□□□ -0
UBR4-210ENST00000466969 KCNC3Q14003 757 aa15.02■□□□□ -0
UBR4-210ENST00000466969 SLC9C2Q5TAH2 1124 aa15.02■□□□□ -0
UBR4-210ENST00000466969 RUFY4Q6ZNE9 571 aa15.02■□□□□ -0
UBR4-210ENST00000466969 RASGRP4Q8TDF6 673 aa15.02■□□□□ -0
UBR4-210ENST00000466969 ATRIPQ8WXE1 791 aa15.02■□□□□ -0
UBR4-210ENST00000466969 OSBPL7Q9BZF2 842 aa15.02■□□□□ -0
UBR4-210ENST00000466969 CYP26B1Q9NR63 512 aa15.02■□□□□ -0
UBR4-210ENST00000466969 DBR1Q9UK59 544 aaKnown RBP15.02■□□□□ -0
UBR4-210ENST00000466969 GMEB2Q9UKD1 530 aa15.02■□□□□ -0
UBR4-210ENST00000466969 SMG5Q9UPR3 1016 aaKnown RBP15.02■□□□□ -0
UBR4-210ENST00000466969 USTQ9Y2C2 406 aa15.02■□□□□ -0
UBR4-210ENST00000466969 HAS3O00219 553 aa15.01□□□□□ -0.01
UBR4-210ENST00000466969 DCNP07585 359 aaKnown RBP15.01□□□□□ -0.01
UBR4-210ENST00000466969 ZNF286BP0CG31 522 aa15.01□□□□□ -0.01
UBR4-210ENST00000466969 CALML3P27482 149 aa15.01□□□□□ -0.01
UBR4-210ENST00000466969 ARHGAP1Q07960 439 aa15.01□□□□□ -0.01
UBR4-210ENST00000466969 LY6KQ17RY6 165 aa15.01□□□□□ -0.01
UBR4-210ENST00000466969 SLFN13Q68D06 897 aa15.01□□□□□ -0.01
UBR4-210ENST00000466969 UNQ6494/PRO21346Q6UXR6 183 aa15.01□□□□□ -0.01
UBR4-210ENST00000466969 STAG1Q8WVM7 1258 aa15.01□□□□□ -0.01
UBR4-210ENST00000466969 CASP10Q92851 521 aa15.01□□□□□ -0.01
UBR4-210ENST00000466969 ATP6V0A1Q93050 837 aa15.01□□□□□ -0.01
UBR4-210ENST00000466969 MEIS3Q99687 375 aa15.01□□□□□ -0.01
UBR4-210ENST00000466969 SMC4Q9NTJ3 1288 aa15.01□□□□□ -0.01
UBR4-210ENST00000466969 NAV2Q8IVL1 2488 aa15□□□□□ -0.01
UBR4-210ENST00000466969 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15□□□□□ -0.01
UBR4-210ENST00000466969 PRKAB2O43741 272 aa15□□□□□ -0.01
UBR4-210ENST00000466969 TGM1P22735 817 aa15□□□□□ -0.01
UBR4-210ENST00000466969 SNAP25P60880 206 aa15□□□□□ -0.01
UBR4-210ENST00000466969 RING1Q06587 406 aa15□□□□□ -0.01
UBR4-210ENST00000466969 HIC1Q14526 733 aa15□□□□□ -0.01
UBR4-210ENST00000466969 ZNF528Q3MIS6 628 aa15□□□□□ -0.01
UBR4-210ENST00000466969 PAN2Q504Q3 1202 aaKnown RBP15□□□□□ -0.01
UBR4-210ENST00000466969 N4BP2L1Q5TBK1 243 aaPredicted RBP15□□□□□ -0.01
UBR4-210ENST00000466969 GMCL1P1Q8NEA9 526 aa15□□□□□ -0.01
UBR4-210ENST00000466969 ACSF2Q96CM8 615 aaPredicted RBP15□□□□□ -0.01
UBR4-210ENST00000466969 ARMT1Q9H993 441 aa15□□□□□ -0.01
UBR4-210ENST00000466969 MKNK2Q9HBH9 465 aa15□□□□□ -0.01
UBR4-210ENST00000466969 WNT16Q9UBV4 365 aa15□□□□□ -0.01
UBR4-210ENST00000466969 SYNPO2Q9UMS6 1093 aa15□□□□□ -0.01
UBR4-210ENST00000466969 SIT1Q9Y3P8 196 aa15□□□□□ -0.01
UBR4-210ENST00000466969 PCDHB12Q9Y5F1 795 aa15□□□□□ -0.01
UBR4-210ENST00000466969 CNOT1A5YKK6 2376 aaKnown RBP15□□□□□ -0.01
UBR4-210ENST00000466969 CACNA1IQ9P0X4 2223 aa15□□□□□ -0.01
UBR4-210ENST00000466969 BAZ2AQ9UIF9 1905 aaKnown RBP15□□□□□ -0.01
UBR4-210ENST00000466969 PLXNA4Q9HCM2 1894 aa14.99□□□□□ -0.01
UBR4-210ENST00000466969 ZNF532Q9HCE3 1301 aa14.99□□□□□ -0.01
UBR4-210ENST00000466969 C17orf102A2RUQ5 167 aa14.99□□□□□ -0.01
UBR4-210ENST00000466969 C1QTNF9BB2RNN3 333 aa14.99□□□□□ -0.01
UBR4-210ENST00000466969 ENPP3O14638 875 aa14.99□□□□□ -0.01
UBR4-210ENST00000466969 C1QTNF9P0C862 333 aa14.99□□□□□ -0.01
UBR4-210ENST00000466969 PDE6AP16499 860 aa14.99□□□□□ -0.01
UBR4-210ENST00000466969 EDNRBP24530 442 aa14.99□□□□□ -0.01
UBR4-210ENST00000466969 OS9Q13438 667 aaPredicted RBP14.99□□□□□ -0.01
UBR4-210ENST00000466969 CCDC62Q6P9F0 684 aa14.99□□□□□ -0.01
UBR4-210ENST00000466969 MKL1Q969V6 931 aa14.99□□□□□ -0.01
UBR4-210ENST00000466969 TBC1D17Q9HA65 648 aa14.99□□□□□ -0.01
UBR4-210ENST00000466969 PCDHGA2Q9Y5H1 932 aa14.99□□□□□ -0.01
UBR4-210ENST00000466969 MYH7BA7E2Y1 1941 aa14.99□□□□□ -0.01
UBR4-210ENST00000466969 MYH4Q9Y623 1939 aa14.99□□□□□ -0.01
UBR4-210ENST00000466969 KIAA1671Q9BY89 1806 aa14.99□□□□□ -0.01
UBR4-210ENST00000466969 EOMESO95936 686 aa14.98□□□□□ -0.01
UBR4-210ENST00000466969 CFHP08603 1231 aa14.98□□□□□ -0.01
UBR4-210ENST00000466969 ERVFC1P60507 584 aa14.98□□□□□ -0.01
UBR4-210ENST00000466969 TTF1Q15361 905 aaPredicted RBP14.98□□□□□ -0.01
UBR4-210ENST00000466969 ATAT1Q5SQI0 421 aa14.98□□□□□ -0.01
UBR4-210ENST00000466969 SPOUT1Q5T280 376 aaKnown RBP14.98□□□□□ -0.01
UBR4-210ENST00000466969 PLPP4Q5VZY2 271 aa14.98□□□□□ -0.01
UBR4-210ENST00000466969 XRRA1Q6P2D8 792 aa14.98□□□□□ -0.01
UBR4-210ENST00000466969 KDF1Q8NAX2 398 aaPredicted RBP14.98□□□□□ -0.01
UBR4-210ENST00000466969 DNERQ8NFT8 737 aa14.98□□□□□ -0.01
UBR4-210ENST00000466969 SSH1Q8WYL5 1049 aa14.98□□□□□ -0.01
UBR4-210ENST00000466969 PARD6AQ9NPB6 346 aa14.98□□□□□ -0.01
UBR4-210ENST00000466969 AAASQ9NRG9 546 aa14.98□□□□□ -0.01
UBR4-210ENST00000466969 DBNLQ9UJU6 430 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms