RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 AARSD1Q9BTE6 412 aaKnown RBP4.96□□□□□ -1.62
GTF3C3-209ENST00000466862 MYRFQ9Y2G1 1151 aa4.96□□□□□ -1.62
GTF3C3-209ENST00000466862 MSRB2Q9Y3D2 182 aa4.96□□□□□ -1.62
GTF3C3-209ENST00000466862 TELO2Q9Y4R8 837 aa4.96□□□□□ -1.62
GTF3C3-209ENST00000466862 AGRPO00253 132 aa4.95□□□□□ -1.62
GTF3C3-209ENST00000466862 MATN3O15232 486 aa4.95□□□□□ -1.62
GTF3C3-209ENST00000466862 ZNF20P17024 532 aa4.95□□□□□ -1.62
GTF3C3-209ENST00000466862 GRK2P25098 689 aa4.95□□□□□ -1.62
GTF3C3-209ENST00000466862 GRK3P35626 688 aa4.95□□□□□ -1.62
GTF3C3-209ENST00000466862 KIAA2012Q0VF49 1180 aa4.95□□□□□ -1.62
GTF3C3-209ENST00000466862 ZXDCQ2QGD7 858 aaPredicted RBP4.95□□□□□ -1.62
GTF3C3-209ENST00000466862 STYK1Q6J9G0 422 aa4.95□□□□□ -1.62
GTF3C3-209ENST00000466862 BORAQ6PGQ7 559 aa4.95□□□□□ -1.62
GTF3C3-209ENST00000466862 TMC5Q6UXY8 1006 aa4.95□□□□□ -1.62
GTF3C3-209ENST00000466862 LBX2Q6XYB7 198 aa4.95□□□□□ -1.62
GTF3C3-209ENST00000466862 USP53Q70EK8 1073 aa4.95□□□□□ -1.62
GTF3C3-209ENST00000466862 OTOP3Q7RTS5 596 aa4.95□□□□□ -1.62
GTF3C3-209ENST00000466862 ST13P5Q8NFI4 369 aaPredicted RBP4.95□□□□□ -1.62
GTF3C3-209ENST00000466862 CHAMP1Q96JM3 812 aa4.95□□□□□ -1.62
GTF3C3-209ENST00000466862 LCORQ96JN0 433 aaPredicted RBP4.95□□□□□ -1.62
GTF3C3-209ENST00000466862 WRNIP1Q96S55 665 aa4.95□□□□□ -1.62
GTF3C3-209ENST00000466862 ST7Q9NRC1 585 aa4.95□□□□□ -1.62
GTF3C3-209ENST00000466862 PPP4R1LQ9P1A2 415 aa4.95□□□□□ -1.62
GTF3C3-209ENST00000466862 LAMTOR5O43504 91 aa4.94□□□□□ -1.62
GTF3C3-209ENST00000466862 INSRRP14616 1297 aa4.94□□□□□ -1.62
GTF3C3-209ENST00000466862 RAB33AQ14088 237 aa4.94□□□□□ -1.62
GTF3C3-209ENST00000466862 CDSNQ15517 529 aa4.94□□□□□ -1.62
GTF3C3-209ENST00000466862 YOD1Q5VVQ6 348 aaPredicted RBP4.94□□□□□ -1.62
GTF3C3-209ENST00000466862 PRAMEF18Q5VWM3 479 aa4.94□□□□□ -1.62
GTF3C3-209ENST00000466862 KCNT2Q6UVM3 1135 aa4.94□□□□□ -1.62
GTF3C3-209ENST00000466862 DNERQ8NFT8 737 aa4.94□□□□□ -1.62
GTF3C3-209ENST00000466862 CLEC4DQ8WXI8 215 aa4.94□□□□□ -1.62
GTF3C3-209ENST00000466862 C8orf49Q96NF6 230 aa4.94□□□□□ -1.62
GTF3C3-209ENST00000466862 CLIC6Q96NY7 704 aa4.94□□□□□ -1.62
GTF3C3-209ENST00000466862 ZFYVE21Q9BQ24 234 aa4.94□□□□□ -1.62
GTF3C3-209ENST00000466862 JAM3Q9BX67 310 aa4.94□□□□□ -1.62
GTF3C3-209ENST00000466862 KRTAP9-8Q9BYQ0 159 aa4.94□□□□□ -1.62
GTF3C3-209ENST00000466862 MEGF9Q9H1U4 602 aa4.94□□□□□ -1.62
GTF3C3-209ENST00000466862 ASXL2Q76L83 1435 aa4.94□□□□□ -1.62
GTF3C3-209ENST00000466862 KRIT1O00522 736 aa4.93□□□□□ -1.62
GTF3C3-209ENST00000466862 SLC27A2O14975 620 aa4.93□□□□□ -1.62
GTF3C3-209ENST00000466862 KLHL18O94889 574 aa4.93□□□□□ -1.62
GTF3C3-209ENST00000466862 LTFP02788 710 aa4.93□□□□□ -1.62
GTF3C3-209ENST00000466862 PABPC1P11940 636 aaKnown RBP4.93□□□□□ -1.62
GTF3C3-209ENST00000466862 IL13P35225 146 aa4.93□□□□□ -1.62
GTF3C3-209ENST00000466862 EPHB4P54760 987 aa4.93□□□□□ -1.62
GTF3C3-209ENST00000466862 HSP90AA2PQ14568 343 aaPredicted RBP4.93□□□□□ -1.62
GTF3C3-209ENST00000466862 KIZQ2M2Z5 673 aa4.93□□□□□ -1.62
GTF3C3-209ENST00000466862 CPZQ66K79 652 aa4.93□□□□□ -1.62
GTF3C3-209ENST00000466862 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.93□□□□□ -1.62
GTF3C3-209ENST00000466862 IGDCC4Q8TDY8 1250 aa4.93□□□□□ -1.62
GTF3C3-209ENST00000466862 DCAF4Q8WV16 495 aa4.93□□□□□ -1.62
GTF3C3-209ENST00000466862 ZNF669Q96BR6 464 aaPredicted RBP4.93□□□□□ -1.62
GTF3C3-209ENST00000466862 CD248Q9HCU0 757 aa4.93□□□□□ -1.62
GTF3C3-209ENST00000466862 DLL4Q9NR61 685 aa4.93□□□□□ -1.62
GTF3C3-209ENST00000466862 CCDC9Q9Y3X0 531 aaKnown RBP4.93□□□□□ -1.62
GTF3C3-209ENST00000466862 NKRFO15226 690 aaKnown RBP eCLIP4.92□□□□□ -1.62
GTF3C3-209ENST00000466862 GPR42O15529 346 aa4.92□□□□□ -1.62
GTF3C3-209ENST00000466862 PRODHO43272 600 aa4.92□□□□□ -1.62
GTF3C3-209ENST00000466862 ADCY3O60266 1144 aa4.92□□□□□ -1.62
GTF3C3-209ENST00000466862 MAFKO60675 156 aa4.92□□□□□ -1.62
GTF3C3-209ENST00000466862 FAHP16930 419 aa4.92□□□□□ -1.62
GTF3C3-209ENST00000466862 EPHA5P54756 1037 aa4.92□□□□□ -1.62
GTF3C3-209ENST00000466862 GPR85P60893 370 aa4.92□□□□□ -1.62
GTF3C3-209ENST00000466862 PUM1Q14671 1186 aaKnown RBP eCLIP4.92□□□□□ -1.62
GTF3C3-209ENST00000466862 LIMS2Q7Z4I7 341 aa4.92□□□□□ -1.62
GTF3C3-209ENST00000466862 PLEKHH3Q7Z736 793 aa4.92□□□□□ -1.62
GTF3C3-209ENST00000466862 FAM124AQ86V42 546 aa4.92□□□□□ -1.62
GTF3C3-209ENST00000466862 KLHL36Q8N4N3 616 aa4.92□□□□□ -1.62
GTF3C3-209ENST00000466862 NUDT10Q8NFP7 164 aa4.92□□□□□ -1.62
GTF3C3-209ENST00000466862 NUDT11Q96G61 164 aa4.92□□□□□ -1.62
GTF3C3-209ENST00000466862 L2HGDHQ9H9P8 463 aa4.92□□□□□ -1.62
GTF3C3-209ENST00000466862 KCND1Q9NSA2 647 aa4.92□□□□□ -1.62
GTF3C3-209ENST00000466862 CROTQ9UKG9 612 aa4.92□□□□□ -1.62
GTF3C3-209ENST00000466862 BLACEA4D250 179 aa4.91□□□□□ -1.62
GTF3C3-209ENST00000466862 IQCA1LA6NCM1 817 aa4.91□□□□□ -1.62
GTF3C3-209ENST00000466862 KNG1P01042 644 aa4.91□□□□□ -1.62
GTF3C3-209ENST00000466862 GRIN1Q05586 938 aa4.91□□□□□ -1.62
GTF3C3-209ENST00000466862 TUSC3Q13454 348 aa4.91□□□□□ -1.62
GTF3C3-209ENST00000466862 ICAM4Q14773 271 aa4.91□□□□□ -1.62
GTF3C3-209ENST00000466862 PAN2Q504Q3 1202 aaKnown RBP4.91□□□□□ -1.62
GTF3C3-209ENST00000466862 CD276Q5ZPR3 534 aa4.91□□□□□ -1.62
GTF3C3-209ENST00000466862 VASNQ6EMK4 673 aa4.91□□□□□ -1.62
GTF3C3-209ENST00000466862 TRIM48Q8IWZ4 208 aa4.91□□□□□ -1.62
GTF3C3-209ENST00000466862 RBM12BQ8IXT5 1001 aaKnown RBP4.91□□□□□ -1.62
GTF3C3-209ENST00000466862 SH3RF2Q8TEC5 729 aa4.91□□□□□ -1.62
GTF3C3-209ENST00000466862 LOXL4Q96JB6 756 aa4.91□□□□□ -1.62
GTF3C3-209ENST00000466862 TMEM168Q9H0V1 697 aa4.91□□□□□ -1.62
GTF3C3-209ENST00000466862 ADAM29Q9UKF5 820 aa4.91□□□□□ -1.62
GTF3C3-209ENST00000466862 TRAV20A0A0B4J274 112 aa4.9□□□□□ -1.63
GTF3C3-209ENST00000466862 TCRBV5S4A2TA0A5A2 114 aa4.9□□□□□ -1.63
GTF3C3-209ENST00000466862 ACOT7O00154 380 aa4.9□□□□□ -1.63
GTF3C3-209ENST00000466862 WNT9AO14904 365 aa4.9□□□□□ -1.63
GTF3C3-209ENST00000466862 CYP7B1O75881 506 aa4.9□□□□□ -1.63
GTF3C3-209ENST00000466862 SOD2P04179 222 aa4.9□□□□□ -1.63
GTF3C3-209ENST00000466862 CYP1A1P04798 512 aaPredicted RBP4.9□□□□□ -1.63
GTF3C3-209ENST00000466862 C6orf222P0C671 652 aaPredicted RBP4.9□□□□□ -1.63
GTF3C3-209ENST00000466862 R3HDM1Q15032 1099 aaKnown RBP4.9□□□□□ -1.63
GTF3C3-209ENST00000466862 SURF1Q15526 300 aa4.9□□□□□ -1.63
GTF3C3-209ENST00000466862 PHF19Q5T6S3 580 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms