RNA–Protein interactions for RNA: ENST00000466588.5

GAPDH-207, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,363 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-207ENST00000466588 H3BQV1 296 aa12.71□□□□□ -0.37
GAPDH-207ENST00000466588 JAK2O60674 1132 aa12.71□□□□□ -0.37
GAPDH-207ENST00000466588 BAIAP3O94812 1187 aa12.71□□□□□ -0.37
GAPDH-207ENST00000466588 DEXIO95424 95 aa12.71□□□□□ -0.37
GAPDH-207ENST00000466588 GOLGA8HP0CJ92 632 aa12.71□□□□□ -0.37
GAPDH-207ENST00000466588 XBP1P17861 261 aa12.71□□□□□ -0.37
GAPDH-207ENST00000466588 NUCB2P80303 420 aa12.71□□□□□ -0.37
GAPDH-207ENST00000466588 ZNF543Q08ER8 600 aa12.71□□□□□ -0.37
GAPDH-207ENST00000466588 BFSP2Q13515 415 aa12.71□□□□□ -0.37
GAPDH-207ENST00000466588 TRIM29Q14134 588 aa12.71□□□□□ -0.37
GAPDH-207ENST00000466588 KRT40Q6A162 431 aa12.71□□□□□ -0.37
GAPDH-207ENST00000466588 TMTC3Q6ZXV5 915 aa12.71□□□□□ -0.37
GAPDH-207ENST00000466588 RETREG2Q8NC44 543 aa12.71□□□□□ -0.37
GAPDH-207ENST00000466588 SMARCC2Q8TAQ2 1214 aa12.71□□□□□ -0.37
GAPDH-207ENST00000466588 ARNTL2Q8WYA1 636 aa12.71□□□□□ -0.37
GAPDH-207ENST00000466588 COPS5Q92905 334 aa12.71□□□□□ -0.37
GAPDH-207ENST00000466588 PHKBQ93100 1093 aa12.71□□□□□ -0.37
GAPDH-207ENST00000466588 MPHOSPH6Q99547 160 aaKnown RBP12.71□□□□□ -0.37
GAPDH-207ENST00000466588 RNF26Q9BY78 433 aaPredicted RBP12.71□□□□□ -0.37
GAPDH-207ENST00000466588 CHMP5Q9NZZ3 219 aa12.71□□□□□ -0.37
GAPDH-207ENST00000466588 CIZ1Q9ULV3 898 aaPredicted RBP12.71□□□□□ -0.37
GAPDH-207ENST00000466588 COL4A4P53420 1690 aaPredicted RBP12.71□□□□□ -0.38
GAPDH-207ENST00000466588 SCN5AQ14524 2016 aa12.7□□□□□ -0.38
GAPDH-207ENST00000466588 PALM3A6NDB9 673 aaPredicted RBP12.7□□□□□ -0.38
GAPDH-207ENST00000466588 PRPF3O43395 683 aaKnown RBP12.7□□□□□ -0.38
GAPDH-207ENST00000466588 ARIH2O95376 493 aa12.7□□□□□ -0.38
GAPDH-207ENST00000466588 PLEKHA8P1O95397 391 aa12.7□□□□□ -0.38
GAPDH-207ENST00000466588 CTDNEP1O95476 244 aa12.7□□□□□ -0.38
GAPDH-207ENST00000466588 SNHG28P0DPA3 235 aa12.7□□□□□ -0.38
GAPDH-207ENST00000466588 TXNP10599 105 aaKnown RBP12.7□□□□□ -0.38
GAPDH-207ENST00000466588 GRB10Q13322 594 aa12.7□□□□□ -0.38
GAPDH-207ENST00000466588 NTRK3Q16288 839 aa12.7□□□□□ -0.38
GAPDH-207ENST00000466588 CMTR1Q8N1G2 835 aaKnown RBP12.7□□□□□ -0.38
GAPDH-207ENST00000466588 STAG2Q8N3U4 1231 aa12.7□□□□□ -0.38
GAPDH-207ENST00000466588 FAM122AQ96E09 287 aa12.7□□□□□ -0.38
GAPDH-207ENST00000466588 CTAGE1Q96RT6 745 aa12.7□□□□□ -0.38
GAPDH-207ENST00000466588 FTOQ9C0B1 505 aaKnown RBP eCLIP12.7□□□□□ -0.38
GAPDH-207ENST00000466588 FAM217BQ9NTX9 383 aaPredicted RBP12.7□□□□□ -0.38
GAPDH-207ENST00000466588 SEC63Q9UGP8 760 aaKnown RBP12.7□□□□□ -0.38
GAPDH-207ENST00000466588 NOD1Q9Y239 953 aa12.7□□□□□ -0.38
GAPDH-207ENST00000466588 STK36Q9NRP7 1315 aa12.7□□□□□ -0.38
GAPDH-207ENST00000466588 KIF28PB7ZC32 967 aa12.69□□□□□ -0.38
GAPDH-207ENST00000466588 TLL1O43897 1013 aa12.69□□□□□ -0.38
GAPDH-207ENST00000466588 LPXNO60711 386 aa12.69□□□□□ -0.38
GAPDH-207ENST00000466588 PPFIA3O75145 1194 aa12.69□□□□□ -0.38
GAPDH-207ENST00000466588 SMARCA1P28370 1054 aa12.69□□□□□ -0.38
GAPDH-207ENST00000466588 WDR5P61964 334 aaKnown RBP12.69□□□□□ -0.38
GAPDH-207ENST00000466588 SPRED2Q7Z698 418 aa12.69□□□□□ -0.38
GAPDH-207ENST00000466588 SESTD1Q86VW0 696 aa12.69□□□□□ -0.38
GAPDH-207ENST00000466588 CCDC155Q8N6L0 562 aa12.69□□□□□ -0.38
GAPDH-207ENST00000466588 CAGE1Q8TC20 777 aa12.69□□□□□ -0.38
GAPDH-207ENST00000466588 AFAP1L1Q8TED9 768 aa12.69□□□□□ -0.38
GAPDH-207ENST00000466588 RRP36Q96EU6 259 aaKnown RBP12.69□□□□□ -0.38
GAPDH-207ENST00000466588 VAT1LQ9HCJ6 419 aa12.69□□□□□ -0.38
GAPDH-207ENST00000466588 VPS37CA5D8V6 355 aaPredicted RBP12.69□□□□□ -0.38
GAPDH-207ENST00000466588 B4DLN1 442 aa12.69□□□□□ -0.38
GAPDH-207ENST00000466588 MMP3P08254 477 aa12.69□□□□□ -0.38
GAPDH-207ENST00000466588 KCNJ6P48051 423 aa12.69□□□□□ -0.38
GAPDH-207ENST00000466588 MRPL12P52815 198 aaKnown RBP12.69□□□□□ -0.38
GAPDH-207ENST00000466588 RBL2Q08999 1139 aa12.69□□□□□ -0.38
GAPDH-207ENST00000466588 GPNMBQ14956 572 aa12.69□□□□□ -0.38
GAPDH-207ENST00000466588 PTGISQ16647 500 aa12.69□□□□□ -0.38
GAPDH-207ENST00000466588 CCDC62Q6P9F0 684 aa12.69□□□□□ -0.38
GAPDH-207ENST00000466588 SRBD1Q8N5C6 995 aaKnown RBP12.69□□□□□ -0.38
GAPDH-207ENST00000466588 RGS22Q8NE09 1264 aa12.69□□□□□ -0.38
GAPDH-207ENST00000466588 PIBF1Q8WXW3 757 aa12.69□□□□□ -0.38
GAPDH-207ENST00000466588 HLA-CQ95604 372 aa12.69□□□□□ -0.38
GAPDH-207ENST00000466588 C8orf76Q96K31 380 aa12.69□□□□□ -0.38
GAPDH-207ENST00000466588 ALG1Q9BT22 464 aa12.69□□□□□ -0.38
GAPDH-207ENST00000466588 SPZ1Q9BXG8 430 aa12.69□□□□□ -0.38
GAPDH-207ENST00000466588 UBA5Q9GZZ9 404 aa12.69□□□□□ -0.38
GAPDH-207ENST00000466588 V9GY48 417 aaPredicted RBP12.69□□□□□ -0.38
GAPDH-207ENST00000466588 CNTNAP5Q8WYK1 1306 aa12.68□□□□□ -0.38
GAPDH-207ENST00000466588 LCHNA4D1U4 455 aa12.68□□□□□ -0.38
GAPDH-207ENST00000466588 STX6O43752 255 aa12.68□□□□□ -0.38
GAPDH-207ENST00000466588 DTNBO60941 627 aa12.68□□□□□ -0.38
GAPDH-207ENST00000466588 SELPP16109 830 aa12.68□□□□□ -0.38
GAPDH-207ENST00000466588 FOSBP53539 338 aa12.68□□□□□ -0.38
GAPDH-207ENST00000466588 ARHGAP1Q07960 439 aa12.68□□□□□ -0.38
GAPDH-207ENST00000466588 GNL2Q13823 731 aaKnown RBP12.68□□□□□ -0.38
GAPDH-207ENST00000466588 GDF6Q6KF10 455 aaPredicted RBP12.68□□□□□ -0.38
GAPDH-207ENST00000466588 AFG1LQ8WV93 481 aa12.68□□□□□ -0.38
GAPDH-207ENST00000466588 DHX38Q92620 1227 aaKnown RBP12.68□□□□□ -0.38
GAPDH-207ENST00000466588 KAT2BQ92831 832 aa12.68□□□□□ -0.38
GAPDH-207ENST00000466588 MAF1Q9H063 256 aa12.68□□□□□ -0.38
GAPDH-207ENST00000466588 EPHX3Q9H6B9 360 aa12.68□□□□□ -0.38
GAPDH-207ENST00000466588 PTPRSQ13332 1948 aa12.67□□□□□ -0.38
GAPDH-207ENST00000466588 PRRC2BQ5JSZ5 2229 aaKnown RBP12.67□□□□□ -0.38
GAPDH-207ENST00000466588 GH1P01241 217 aa12.67□□□□□ -0.38
GAPDH-207ENST00000466588 CXCL10P02778 98 aa12.67□□□□□ -0.38
GAPDH-207ENST00000466588 FDPSP14324 419 aaKnown RBP12.67□□□□□ -0.38
GAPDH-207ENST00000466588 SYT1P21579 422 aa12.67□□□□□ -0.38
GAPDH-207ENST00000466588 CHMP4BP1P59074 171 aa12.67□□□□□ -0.38
GAPDH-207ENST00000466588 SAFBQ15424 915 aaKnown RBP eCLIP12.67□□□□□ -0.38
GAPDH-207ENST00000466588 USH1GQ495M9 461 aa12.67□□□□□ -0.38
GAPDH-207ENST00000466588 CNKSR3Q6P9H4 555 aa12.67□□□□□ -0.38
GAPDH-207ENST00000466588 LRRC8DQ7L1W4 858 aa12.67□□□□□ -0.38
GAPDH-207ENST00000466588 TMCO2Q7Z6W1 182 aaPredicted RBP12.67□□□□□ -0.38
GAPDH-207ENST00000466588 HOMER1Q86YM7 354 aa12.67□□□□□ -0.38
GAPDH-207ENST00000466588 ADGRF4Q8IZF3 695 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms