RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 DCP2Q8IU60 420 aaKnown RBP5.97□□□□□ -1.45
CDC42BPA-211ENST00000466538 TRIM48Q8IWZ4 208 aa5.97□□□□□ -1.45
CDC42BPA-211ENST00000466538 CISD2Q8N5K1 135 aaKnown RBP5.97□□□□□ -1.45
CDC42BPA-211ENST00000466538 PIP4K2CQ8TBX8 421 aa5.97□□□□□ -1.45
CDC42BPA-211ENST00000466538 CHTF18Q8WVB6 975 aa5.97□□□□□ -1.45
CDC42BPA-211ENST00000466538 SEC14L1Q92503 715 aa5.97□□□□□ -1.45
CDC42BPA-211ENST00000466538 GPR101Q96P66 508 aaPredicted RBP5.97□□□□□ -1.45
CDC42BPA-211ENST00000466538 MENTQ9BUN1 341 aa5.97□□□□□ -1.45
CDC42BPA-211ENST00000466538 PCMTD2Q9NV79 361 aa5.97□□□□□ -1.45
CDC42BPA-211ENST00000466538 THG1LQ9NWX6 298 aaKnown RBP5.97□□□□□ -1.45
CDC42BPA-211ENST00000466538 CTNND2Q9UQB3 1225 aa5.97□□□□□ -1.45
CDC42BPA-211ENST00000466538 SPEF1Q9Y4P9 236 aa5.97□□□□□ -1.45
CDC42BPA-211ENST00000466538 H7C1D1 291 aa5.96□□□□□ -1.46
CDC42BPA-211ENST00000466538 NKRFO15226 690 aaKnown RBP eCLIP5.96□□□□□ -1.46
CDC42BPA-211ENST00000466538 SRGAP3O43295 1099 aa5.96□□□□□ -1.46
CDC42BPA-211ENST00000466538 RNASE1P07998 156 aaKnown RBP5.96□□□□□ -1.46
CDC42BPA-211ENST00000466538 YBX3P16989 372 aaKnown RBP eCLIP5.96□□□□□ -1.464e-8■■□□□ 14.1
CDC42BPA-211ENST00000466538 KRT15P19012 456 aa5.96□□□□□ -1.46
CDC42BPA-211ENST00000466538 GJA4P35212 333 aa5.96□□□□□ -1.46
CDC42BPA-211ENST00000466538 AFMP43652 599 aa5.96□□□□□ -1.46
CDC42BPA-211ENST00000466538 EPHA5P54756 1037 aa5.96□□□□□ -1.46
CDC42BPA-211ENST00000466538 ZNF174Q15697 407 aa5.96□□□□□ -1.46
CDC42BPA-211ENST00000466538 FIGNQ5HY92 759 aa5.96□□□□□ -1.46
CDC42BPA-211ENST00000466538 BICRALQ6AI39 1079 aa5.96□□□□□ -1.46
CDC42BPA-211ENST00000466538 SHISA4Q96DD7 197 aa5.96□□□□□ -1.46
CDC42BPA-211ENST00000466538 AP5M1Q9H0R1 490 aa5.96□□□□□ -1.46
CDC42BPA-211ENST00000466538 EMC7Q9NPA0 242 aa5.96□□□□□ -1.46
CDC42BPA-211ENST00000466538 ACSS2Q9NR19 701 aa5.96□□□□□ -1.46
CDC42BPA-211ENST00000466538 OXSMQ9NWU1 459 aa5.96□□□□□ -1.46
CDC42BPA-211ENST00000466538 GPR160Q9UJ42 338 aa5.96□□□□□ -1.46
CDC42BPA-211ENST00000466538 NUDT5Q9UKK9 219 aa5.96□□□□□ -1.46
CDC42BPA-211ENST00000466538 ADAMTS6Q9UKP5 1117 aa5.96□□□□□ -1.46
CDC42BPA-211ENST00000466538 SPO11Q9Y5K1 396 aa5.96□□□□□ -1.46
CDC42BPA-211ENST00000466538 K7ESF4 209 aa5.95□□□□□ -1.46
CDC42BPA-211ENST00000466538 MAN2B1O00754 1011 aa5.95□□□□□ -1.46
CDC42BPA-211ENST00000466538 CYBBP04839 570 aa5.95□□□□□ -1.46
CDC42BPA-211ENST00000466538 CYP17A1P05093 508 aa5.95□□□□□ -1.46
CDC42BPA-211ENST00000466538 TACR1P25103 407 aa5.95□□□□□ -1.46
CDC42BPA-211ENST00000466538 ID4P47928 161 aa5.95□□□□□ -1.46
CDC42BPA-211ENST00000466538 SESN3P58005 492 aa5.95□□□□□ -1.46
CDC42BPA-211ENST00000466538 TMPRSS15P98073 1019 aa5.95□□□□□ -1.46
CDC42BPA-211ENST00000466538 IRF9Q00978 393 aa5.95□□□□□ -1.46
CDC42BPA-211ENST00000466538 FAM50AQ14320 339 aaKnown RBP5.95□□□□□ -1.46
CDC42BPA-211ENST00000466538 NR1I3Q14994 352 aa5.95□□□□□ -1.46
CDC42BPA-211ENST00000466538 ZNF792Q3KQV3 632 aa5.95□□□□□ -1.46
CDC42BPA-211ENST00000466538 ODR4Q5SWX8 454 aa5.95□□□□□ -1.46
CDC42BPA-211ENST00000466538 GPR158Q5T848 1215 aa5.95□□□□□ -1.46
CDC42BPA-211ENST00000466538 IQSEC1Q6DN90 963 aa5.95□□□□□ -1.46
CDC42BPA-211ENST00000466538 PAQR3Q6TCH7 311 aa5.95□□□□□ -1.46
CDC42BPA-211ENST00000466538 LHFPL2Q6ZUX7 228 aa5.95□□□□□ -1.46
CDC42BPA-211ENST00000466538 PTRH1Q86Y79 214 aaKnown RBP5.95□□□□□ -1.46
CDC42BPA-211ENST00000466538 SH3RF2Q8TEC5 729 aa5.95□□□□□ -1.46
CDC42BPA-211ENST00000466538 DLG3Q92796 817 aa5.95□□□□□ -1.46
CDC42BPA-211ENST00000466538 PEX11GQ96HA9 241 aa5.95□□□□□ -1.46
CDC42BPA-211ENST00000466538 C19orf44Q9H6X5 657 aa5.95□□□□□ -1.46
CDC42BPA-211ENST00000466538 SPTLC3Q9NUV7 552 aa5.95□□□□□ -1.46
CDC42BPA-211ENST00000466538 SRPK3Q9UPE1 567 aa5.95□□□□□ -1.46
CDC42BPA-211ENST00000466538 ZNF652Q9Y2D9 606 aa5.95□□□□□ -1.46
CDC42BPA-211ENST00000466538 ATP23Q9Y6H3 246 aa5.95□□□□□ -1.46
CDC42BPA-211ENST00000466538 ADAM23O75077 832 aa5.94□□□□□ -1.46
CDC42BPA-211ENST00000466538 HIP1RO75146 1068 aa5.94□□□□□ -1.46
CDC42BPA-211ENST00000466538 ZBTB7AO95365 584 aa5.94□□□□□ -1.46
CDC42BPA-211ENST00000466538 ERVFC1P60507 584 aa5.94□□□□□ -1.46
CDC42BPA-211ENST00000466538 ERVFRD-1P60508 538 aa5.94□□□□□ -1.46
CDC42BPA-211ENST00000466538 PHC1P78364 1004 aa5.94□□□□□ -1.46
CDC42BPA-211ENST00000466538 ITKQ08881 620 aa5.94□□□□□ -1.46
CDC42BPA-211ENST00000466538 MTMR1Q13613 665 aa5.94□□□□□ -1.46
CDC42BPA-211ENST00000466538 LRP8Q14114 963 aa5.94□□□□□ -1.46
CDC42BPA-211ENST00000466538 SLC9A5Q14940 896 aa5.94□□□□□ -1.46
CDC42BPA-211ENST00000466538 KIR3DS1Q14943 382 aa5.94□□□□□ -1.46
CDC42BPA-211ENST00000466538 CREB3L3Q68CJ9 461 aa5.94□□□□□ -1.46
CDC42BPA-211ENST00000466538 CC2D1AQ6P1N0 951 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-211ENST00000466538 KCTD1Q719H9 257 aa5.94□□□□□ -1.46
CDC42BPA-211ENST00000466538 NOSTRINQ8IVI9 506 aa5.94□□□□□ -1.46
CDC42BPA-211ENST00000466538 ABHD4Q8TB40 342 aa5.94□□□□□ -1.46
CDC42BPA-211ENST00000466538 TNFRSF12AQ9NP84 129 aa5.94□□□□□ -1.46
CDC42BPA-211ENST00000466538 FBLN5Q9UBX5 448 aa5.94□□□□□ -1.46
CDC42BPA-211ENST00000466538 B3GALT1Q9Y5Z6 326 aa5.94□□□□□ -1.46
CDC42BPA-211ENST00000466538 SGSM2O43147 1006 aa5.93□□□□□ -1.46
CDC42BPA-211ENST00000466538 MARCH6O60337 910 aa5.93□□□□□ -1.46
CDC42BPA-211ENST00000466538 KATNA1O75449 491 aa5.93□□□□□ -1.46
CDC42BPA-211ENST00000466538 ALDH1L1O75891 902 aa5.93□□□□□ -1.46
CDC42BPA-211ENST00000466538 MPOP05164 745 aa5.93□□□□□ -1.46
CDC42BPA-211ENST00000466538 DBHP09172 617 aa5.93□□□□□ -1.46
CDC42BPA-211ENST00000466538 LSP1P33241 339 aa5.93□□□□□ -1.46
CDC42BPA-211ENST00000466538 EPHB1P54762 984 aa5.93□□□□□ -1.46
CDC42BPA-211ENST00000466538 TMEM62Q0P6H9 643 aa5.93□□□□□ -1.46
CDC42BPA-211ENST00000466538 ZZZ3Q8IYH5 903 aa5.93□□□□□ -1.46
CDC42BPA-211ENST00000466538 CNTD1Q8N815 330 aa5.93□□□□□ -1.46
CDC42BPA-211ENST00000466538 FLAD1Q8NFF5 587 aa5.93□□□□□ -1.46
CDC42BPA-211ENST00000466538 SLC5A5Q92911 643 aa5.93□□□□□ -1.46
CDC42BPA-211ENST00000466538 ASPSCR1Q9BZE9 553 aa5.93□□□□□ -1.46
CDC42BPA-211ENST00000466538 RC3H2Q9HBD1 1191 aaKnown RBP5.93□□□□□ -1.46
CDC42BPA-211ENST00000466538 KCNH7Q9NS40 1196 aa5.93□□□□□ -1.46
CDC42BPA-211ENST00000466538 KLHL42Q9P2K6 505 aa5.93□□□□□ -1.46
CDC42BPA-211ENST00000466538 MYOTQ9UBF9 498 aa5.93□□□□□ -1.46
CDC42BPA-211ENST00000466538 ASH2LQ9UBL3 628 aa5.93□□□□□ -1.46
CDC42BPA-211ENST00000466538 YBX2Q9Y2T7 364 aaKnown RBP5.93□□□□□ -1.46
CDC42BPA-211ENST00000466538 SLC27A2O14975 620 aa5.92□□□□□ -1.46
CDC42BPA-211ENST00000466538 ADAMTS4O75173 837 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms