RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 MAF1Q9H063 256 aa11.99□□□□□ -0.49
GPNMB-206ENST00000465673 IL25Q9H293 177 aa11.99□□□□□ -0.49
GPNMB-206ENST00000465673 TUT1Q9H6E5 874 aaKnown RBP11.99□□□□□ -0.49
GPNMB-206ENST00000465673 MLXIPQ9HAP2 919 aa11.99□□□□□ -0.49
GPNMB-206ENST00000465673 SETD4Q9NVD3 440 aa11.99□□□□□ -0.49
GPNMB-206ENST00000465673 MAD2L2Q9UI95 211 aa11.99□□□□□ -0.49
GPNMB-206ENST00000465673 EMSYQ7Z589 1322 aa11.99□□□□□ -0.49
GPNMB-206ENST00000465673 MICAL3Q7RTP6 2002 aa11.99□□□□□ -0.49
GPNMB-206ENST00000465673 H3BNC9 293 aa11.98□□□□□ -0.49
GPNMB-206ENST00000465673 LGALS2P05162 132 aa11.98□□□□□ -0.49
GPNMB-206ENST00000465673 GHRHRQ02643 423 aa11.98□□□□□ -0.49
GPNMB-206ENST00000465673 SEC23AQ15436 765 aa11.98□□□□□ -0.49
GPNMB-206ENST00000465673 CLUL1Q15846 466 aa11.98□□□□□ -0.49
GPNMB-206ENST00000465673 CCDC178Q5BJE1 867 aa11.98□□□□□ -0.49
GPNMB-206ENST00000465673 PLEKHM2Q8IWE5 1019 aa11.98□□□□□ -0.49
GPNMB-206ENST00000465673 SEPT8Q92599 483 aa11.98□□□□□ -0.49
GPNMB-206ENST00000465673 TOP1MTQ969P6 601 aa11.98□□□□□ -0.49
GPNMB-206ENST00000465673 PIGSQ96S52 555 aa11.98□□□□□ -0.49
GPNMB-206ENST00000465673 SENP2Q9HC62 589 aa11.98□□□□□ -0.49
GPNMB-206ENST00000465673 RTEL1Q9NZ71 1219 aa11.98□□□□□ -0.49
GPNMB-206ENST00000465673 PALM3A6NDB9 673 aaPredicted RBP11.97□□□□□ -0.49
GPNMB-206ENST00000465673 ZBTB5O15062 677 aa11.97□□□□□ -0.49
GPNMB-206ENST00000465673 CCND2P30279 289 aa11.97□□□□□ -0.49
GPNMB-206ENST00000465673 HOXC8P31273 242 aa11.97□□□□□ -0.49
GPNMB-206ENST00000465673 LTBRP36941 435 aa11.97□□□□□ -0.49
GPNMB-206ENST00000465673 MFAP1P55081 439 aaKnown RBP11.97□□□□□ -0.49
GPNMB-206ENST00000465673 MRPS9P82933 396 aaKnown RBP11.97□□□□□ -0.49
GPNMB-206ENST00000465673 SP4Q02446 784 aa11.97□□□□□ -0.49
GPNMB-206ENST00000465673 DLX2Q07687 328 aaPredicted RBP11.97□□□□□ -0.49
GPNMB-206ENST00000465673 SEMA3FQ13275 785 aa11.97□□□□□ -0.49
GPNMB-206ENST00000465673 PTPROQ16827 1216 aa11.97□□□□□ -0.49
GPNMB-206ENST00000465673 IFIT1BQ5T764 474 aaKnown RBP11.97□□□□□ -0.49
GPNMB-206ENST00000465673 UTP14CQ5TAP6 766 aaKnown RBP11.97□□□□□ -0.49
GPNMB-206ENST00000465673 CYFIP1Q7L576 1253 aa11.97□□□□□ -0.49
GPNMB-206ENST00000465673 TICAM2Q86XR7 235 aa11.97□□□□□ -0.49
GPNMB-206ENST00000465673 PIBF1Q8WXW3 757 aa11.97□□□□□ -0.49
GPNMB-206ENST00000465673 PABPC5Q96DU9 382 aaKnown RBP11.97□□□□□ -0.49
GPNMB-206ENST00000465673 UBAC1Q9BSL1 405 aa11.97□□□□□ -0.49
GPNMB-206ENST00000465673 IFIH1Q9BYX4 1025 aaKnown RBP11.97□□□□□ -0.49
GPNMB-206ENST00000465673 DIAPH3Q9NSV4 1193 aa11.97□□□□□ -0.49
GPNMB-206ENST00000465673 CLDND1Q9NY35 253 aa11.97□□□□□ -0.49
GPNMB-206ENST00000465673 BAZ2BQ9UIF8 2168 aaKnown RBP11.96□□□□□ -0.49
GPNMB-206ENST00000465673 LAMA4Q16363 1823 aa11.96□□□□□ -0.49
GPNMB-206ENST00000465673 POTEB3A0JP26 581 aa11.96□□□□□ -0.49
GPNMB-206ENST00000465673 GCOM1H8Y6P7 765 aaPredicted RBP11.96□□□□□ -0.49
GPNMB-206ENST00000465673 GRM6O15303 877 aa11.96□□□□□ -0.49
GPNMB-206ENST00000465673 CYTH3O43739 400 aa11.96□□□□□ -0.49
GPNMB-206ENST00000465673 IGHDP01880 384 aa11.96□□□□□ -0.49
GPNMB-206ENST00000465673 POLR2MP0CAP2 368 aa11.96□□□□□ -0.49
GPNMB-206ENST00000465673 TGFB3P10600 412 aa11.96□□□□□ -0.49
GPNMB-206ENST00000465673 ALADP13716 330 aa11.96□□□□□ -0.49
GPNMB-206ENST00000465673 GTF2F1P35269 517 aaKnown RBP eCLIP11.96□□□□□ -0.49
GPNMB-206ENST00000465673 ZP2Q05996 745 aa11.96□□□□□ -0.49
GPNMB-206ENST00000465673 IMMTQ16891 758 aaKnown RBP11.96□□□□□ -0.49
GPNMB-206ENST00000465673 TIGD5Q53EQ6 642 aa11.96□□□□□ -0.49
GPNMB-206ENST00000465673 KCNV1Q6PIU1 500 aa11.96□□□□□ -0.49
GPNMB-206ENST00000465673 POTEBQ6S5H4 581 aa11.96□□□□□ -0.49
GPNMB-206ENST00000465673 NSUN3Q9H649 340 aaKnown RBP11.96□□□□□ -0.49
GPNMB-206ENST00000465673 CTNNA3Q9UI47 895 aa11.96□□□□□ -0.49
GPNMB-206ENST00000465673 NOP56O00567 594 aaKnown RBP11.95□□□□□ -0.5
GPNMB-206ENST00000465673 DCXO43602 365 aa11.95□□□□□ -0.5
GPNMB-206ENST00000465673 CHRNA1P02708 482 aa11.95□□□□□ -0.5
GPNMB-206ENST00000465673 LINC00271P0C7V0 271 aa11.95□□□□□ -0.5
GPNMB-206ENST00000465673 CTNNB1P35222 781 aa11.95□□□□□ -0.5
GPNMB-206ENST00000465673 ARHGAP4P98171 946 aa11.95□□□□□ -0.5
GPNMB-206ENST00000465673 COL19A1Q14993 1142 aa11.95□□□□□ -0.5
GPNMB-206ENST00000465673 CSPP1Q1MSJ5 1256 aa11.95□□□□□ -0.5
GPNMB-206ENST00000465673 RUFY4Q6ZNE9 571 aa11.95□□□□□ -0.5
GPNMB-206ENST00000465673 RPAINQ86UA6 219 aa11.95□□□□□ -0.5
GPNMB-206ENST00000465673 LMBR1Q8WVP7 490 aa11.95□□□□□ -0.5
GPNMB-206ENST00000465673 FBXL18Q96ME1 805 aa11.95□□□□□ -0.5
GPNMB-206ENST00000465673 SAMD11Q96NU1 681 aa11.95□□□□□ -0.5
GPNMB-206ENST00000465673 GPR20Q99678 358 aa11.95□□□□□ -0.5
GPNMB-206ENST00000465673 DSCC1Q9BVC3 393 aa11.95□□□□□ -0.5
GPNMB-206ENST00000465673 KRT23Q9C075 422 aa11.95□□□□□ -0.5
GPNMB-206ENST00000465673 TAF6LQ9Y6J9 622 aa11.95□□□□□ -0.5
GPNMB-206ENST00000465673 DOCK5Q9H7D0 1870 aa11.95□□□□□ -0.5
GPNMB-206ENST00000465673 C19orf67A6NJJ6 358 aa11.94□□□□□ -0.5
GPNMB-206ENST00000465673 SPATA31C2B4DYI2 1134 aa11.94□□□□□ -0.5
GPNMB-206ENST00000465673 LINC01565O15544 149 aa11.94□□□□□ -0.5
GPNMB-206ENST00000465673 GHRP10912 638 aa11.94□□□□□ -0.5
GPNMB-206ENST00000465673 IRS1P35568 1242 aa11.94□□□□□ -0.5
GPNMB-206ENST00000465673 MRE11P49959 708 aa11.94□□□□□ -0.5
GPNMB-206ENST00000465673 ADAM17P78536 824 aa11.94□□□□□ -0.5
GPNMB-206ENST00000465673 HYAL1Q12794 435 aa11.94□□□□□ -0.5
GPNMB-206ENST00000465673 GRM4Q14833 912 aa11.94□□□□□ -0.5
GPNMB-206ENST00000465673 PUS10Q3MIT2 529 aaKnown RBP11.94□□□□□ -0.5
GPNMB-206ENST00000465673 METTL7BQ6UX53 244 aa11.94□□□□□ -0.5
GPNMB-206ENST00000465673 CHD1LQ86WJ1 897 aa11.94□□□□□ -0.5
GPNMB-206ENST00000465673 SMC5Q8IY18 1101 aa11.94□□□□□ -0.5
GPNMB-206ENST00000465673 FIBCD1Q8N539 461 aa11.94□□□□□ -0.5
GPNMB-206ENST00000465673 ZBTB10Q96DT7 871 aa11.94□□□□□ -0.5
GPNMB-206ENST00000465673 IL17RAQ96F46 866 aa11.94□□□□□ -0.5
GPNMB-206ENST00000465673 USP26Q9BXU7 913 aa11.94□□□□□ -0.5
GPNMB-206ENST00000465673 IGFLR1Q9H665 355 aa11.94□□□□□ -0.5
GPNMB-206ENST00000465673 RIOX1Q9H6W3 641 aa11.94□□□□□ -0.5
GPNMB-206ENST00000465673 MAP3K20Q9NYL2 800 aaKnown RBP11.94□□□□□ -0.5
GPNMB-206ENST00000465673 ICAM3P32942 547 aa11.93□□□□□ -0.5
GPNMB-206ENST00000465673 BMPR1AP36894 532 aa11.93□□□□□ -0.5
GPNMB-206ENST00000465673 NHLH1Q02575 133 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms