RNA–Protein interactions for RNA: ENST00000465634.5

TRIM5-208, Transcript of tripartite motif containing 5, human

TSL 1 (best)

Gene TRIM5, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM5-208	ENST00000465634	RDM1	Q8NG50	284 aa		10.89	□□□□□ -0.67
TRIM5-208	ENST00000465634	EMID1	Q96A84	441 aa	Predicted RBP	10.89	□□□□□ -0.67
TRIM5-208	ENST00000465634	ZFP91	Q96JP5	570 aa	Predicted RBP	10.89	□□□□□ -0.67
TRIM5-208	ENST00000465634	TEKT3	Q9BXF9	490 aa		10.89	□□□□□ -0.67
TRIM5-208	ENST00000465634	FTO	Q9C0B1	505 aa	Known RBP eCLIP	10.89	□□□□□ -0.67
TRIM5-208	ENST00000465634	TTC12	Q9H892	705 aa	Predicted RBP	10.89	□□□□□ -0.67
TRIM5-208	ENST00000465634	PTCH2	Q9Y6C5	1203 aa		10.89	□□□□□ -0.67
TRIM5-208	ENST00000465634	DDX49	Q9Y6V7	483 aa	Known RBP	10.89	□□□□□ -0.67
TRIM5-208	ENST00000465634	LCT	P09848	1927 aa		10.89	□□□□□ -0.67
TRIM5-208	ENST00000465634	CASP8AP2	Q9UKL3	1982 aa		10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	GOLGA6L22	H0YM25	854 aa		10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	SLC26A4	O43511	780 aa		10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	CUTA	O60888	179 aa		10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	ATP9A	O75110	1047 aa		10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	DUSP11	O75319	330 aa	Known RBP	10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	GH1	P01241	217 aa		10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	PRKAR2A	P13861	404 aa	Known RBP	10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	UBA1	P22314	1058 aa	Known RBP	10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	ADCYAP1R1	P41586	468 aa		10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	ME1	P48163	572 aa		10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	SP2	Q02086	613 aa		10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	ITGB3BP	Q13352	177 aa	Predicted RBP	10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	SLC9C1	Q4G0N8	1177 aa		10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	PRAMEF19	Q5SWL8	479 aa		10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	CELF3	Q5SZQ8	465 aa	Known RBP	10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	ADAL	Q6DHV7	355 aa		10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	METTL7B	Q6UX53	244 aa		10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	B3GNT9	Q6UX72	402 aa		10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	DHX37	Q8IY37	1157 aa	Known RBP	10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	SMAP1	Q8IYB5	467 aa	Predicted RBP	10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	IGSF22	Q8N9C0	903 aa		10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	TMEM87A	Q8NBN3	555 aa		10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	MLXIP	Q9HAP2	919 aa		10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	JPH1	Q9HDC5	661 aa	Predicted RBP	10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	HMX1	Q9NP08	348 aa	Predicted RBP	10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	PDGFC	Q9NRA1	345 aa		10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	SLC9A2	Q9UBY0	812 aa		10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	FBXO2	Q9UK22	296 aa	Predicted RBP	10.88	□□□□□ -0.67
TRIM5-208	ENST00000465634	PLXNA1	Q9UIW2	1896 aa		10.87	□□□□□ -0.67
TRIM5-208	ENST00000465634	PCNT	O95613	3336 aa		10.87	□□□□□ -0.67
TRIM5-208	ENST00000465634	ATG7	O95352	703 aa		10.87	□□□□□ -0.67
TRIM5-208	ENST00000465634	ARIH2	O95376	493 aa		10.87	□□□□□ -0.67
TRIM5-208	ENST00000465634	GGPS1	O95749	300 aa		10.87	□□□□□ -0.67
TRIM5-208	ENST00000465634	INHA	P05111	366 aa		10.87	□□□□□ -0.67
TRIM5-208	ENST00000465634	SMPD1	P17405	629 aa		10.87	□□□□□ -0.67
TRIM5-208	ENST00000465634	CAPN2	P17655	700 aa		10.87	□□□□□ -0.67
TRIM5-208	ENST00000465634	MARCKS	P29966	332 aa	Predicted RBP	10.87	□□□□□ -0.67
TRIM5-208	ENST00000465634	TEC	P42680	631 aa		10.87	□□□□□ -0.67
TRIM5-208	ENST00000465634	JAK3	P52333	1124 aa		10.87	□□□□□ -0.67
TRIM5-208	ENST00000465634	NKX3-2	P78367	333 aa		10.87	□□□□□ -0.67
TRIM5-208	ENST00000465634	SPIRE1	Q08AE8	756 aa		10.87	□□□□□ -0.67
TRIM5-208	ENST00000465634	LY6K	Q17RY6	165 aa		10.87	□□□□□ -0.67
TRIM5-208	ENST00000465634	CYFIP1	Q7L576	1253 aa		10.87	□□□□□ -0.67
TRIM5-208	ENST00000465634	KCTD17	Q8N5Z5	321 aa		10.87	□□□□□ -0.67
TRIM5-208	ENST00000465634	VAV3	Q9UKW4	847 aa		10.87	□□□□□ -0.67
TRIM5-208	ENST00000465634	PCDHA7	Q9UN72	937 aa		10.87	□□□□□ -0.67
TRIM5-208	ENST00000465634	GNE	Q9Y223	722 aa	Known RBP	10.87	□□□□□ -0.67
TRIM5-208	ENST00000465634	MYH7B	A7E2Y1	1941 aa		10.87	□□□□□ -0.67
TRIM5-208	ENST00000465634		A0A1W2PQ27	194 aa		10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634		A0A1W2PQ64	194 aa		10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634		A0A1W2PQD8	194 aa		10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634	VWA3A	A6NCI4	1184 aa		10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634	GOLGA6L4	A6NEF3	574 aa		10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634	WDR64	B1ANS9	1081 aa		10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634	PPFIA4	O75335	1185 aa		10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634	FARP2	O94887	1054 aa	Predicted RBP	10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634	RARB	P10826	455 aa		10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634	MUT	P22033	750 aa		10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634	CNGA1	P29973	690 aa		10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634	ARHGAP1	Q07960	439 aa		10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634	TRIM32	Q13049	653 aa		10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634	EPHA7	Q15375	998 aa		10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634	IL17A	Q16552	155 aa		10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634	BRDT	Q58F21	947 aa	Predicted RBP	10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634	AXDND1	Q5T1B0	1012 aa	Predicted RBP	10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634	TRPV1	Q8NER1	839 aa		10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634	PPTC7	Q8NI37	304 aa		10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634	ERMN	Q8TAM6	284 aa		10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634	NEK9	Q8TD19	979 aa		10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634	SEPT1	Q8WYJ6	367 aa		10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634	SPATA33	Q96N06	139 aa		10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634	AP5M1	Q9H0R1	490 aa		10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634	SPC25	Q9HBM1	224 aa		10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634	LRWD1	Q9UFC0	647 aa		10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634	PCDHA10	Q9Y5I2	948 aa		10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634	ZSWIM8	A7E2V4	1837 aa		10.86	□□□□□ -0.67
TRIM5-208	ENST00000465634	DOCK3	Q8IZD9	2030 aa		10.85	□□□□□ -0.67
TRIM5-208	ENST00000465634	LRRC37A2	A6NM11	1700 aa		10.85	□□□□□ -0.67
TRIM5-208	ENST00000465634	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	10.85	□□□□□ -0.67
TRIM5-208	ENST00000465634		A6NJR5	290 aa		10.85	□□□□□ -0.67
TRIM5-208	ENST00000465634	NOP56	O00567	594 aa	Known RBP	10.85	□□□□□ -0.67
TRIM5-208	ENST00000465634	KPNA6	O60684	536 aa		10.85	□□□□□ -0.67
TRIM5-208	ENST00000465634	DKC1	O60832	514 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
TRIM5-208	ENST00000465634	PSAP	P07602	524 aa		10.85	□□□□□ -0.67
TRIM5-208	ENST00000465634	PTMS	P20962	102 aa		10.85	□□□□□ -0.67
TRIM5-208	ENST00000465634	CMA1	P23946	247 aa		10.85	□□□□□ -0.67
TRIM5-208	ENST00000465634	TXLNA	P40222	546 aa		10.85	□□□□□ -0.67
TRIM5-208	ENST00000465634	CPT1A	P50416	773 aa		10.85	□□□□□ -0.67
TRIM5-208	ENST00000465634	GJA9	P57773	515 aa		10.85	□□□□□ -0.67
TRIM5-208	ENST00000465634	ACTR2	P61160	394 aa		10.85	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms