RNA–Protein interactions for RNA: ENST00000465628.1

SCAP-209, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-209ENST00000465628 AP3B2Q13367 1082 aa17.8■□□□□ 0.44
SCAP-209ENST00000465628 SESTD1Q86VW0 696 aa17.8■□□□□ 0.44
SCAP-209ENST00000465628 TRIM22Q8IYM9 498 aa17.8■□□□□ 0.44
SCAP-209ENST00000465628 CAGE1Q8TC20 777 aa17.8■□□□□ 0.44
SCAP-209ENST00000465628 FTOQ9C0B1 505 aaKnown RBP eCLIP17.8■□□□□ 0.44
SCAP-209ENST00000465628 PDRG1Q9NUG6 133 aa17.8■□□□□ 0.44
SCAP-209ENST00000465628 SCN5AQ14524 2016 aa17.79■□□□□ 0.44
SCAP-209ENST00000465628 PITPNM1O00562 1244 aa17.79■□□□□ 0.44
SCAP-209ENST00000465628 EIF5BO60841 1220 aaKnown RBP17.79■□□□□ 0.44
SCAP-209ENST00000465628 PFKMP08237 780 aa17.79■□□□□ 0.44
SCAP-209ENST00000465628 STK3Q13188 491 aa17.79■□□□□ 0.44
SCAP-209ENST00000465628 JAKMIP3Q5VZ66 844 aa17.79■□□□□ 0.44
SCAP-209ENST00000465628 CPLX2Q6PUV4 134 aaKnown RBP17.79■□□□□ 0.44
SCAP-209ENST00000465628 TRIM50Q86XT4 487 aa17.79■□□□□ 0.44
SCAP-209ENST00000465628 FBXL16Q8N461 479 aa17.79■□□□□ 0.44
SCAP-209ENST00000465628 CCDC148Q8NFR7 591 aa17.79■□□□□ 0.44
SCAP-209ENST00000465628 SENP7Q9BQF6 1050 aa17.79■□□□□ 0.44
SCAP-209ENST00000465628 LARP6Q9BRS8 491 aaKnown RBP17.79■□□□□ 0.44
SCAP-209ENST00000465628 AGXT2Q9BYV1 514 aa17.79■□□□□ 0.44
SCAP-209ENST00000465628 C6orf50Q9HD87 102 aa17.79■□□□□ 0.44
SCAP-209ENST00000465628 TMEM260Q9NX78 707 aa17.79■□□□□ 0.44
SCAP-209ENST00000465628 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.78■□□□□ 0.44
SCAP-209ENST00000465628 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.78■□□□□ 0.44
SCAP-209ENST00000465628 H3BRB1 525 aa17.78■□□□□ 0.44
SCAP-209ENST00000465628 PRPF3O43395 683 aaKnown RBP17.78■□□□□ 0.44
SCAP-209ENST00000465628 ACTN1P12814 892 aa17.78■□□□□ 0.44
SCAP-209ENST00000465628 ITGB5P18084 799 aa17.78■□□□□ 0.44
SCAP-209ENST00000465628 PDIA3P30101 505 aaKnown RBP17.78■□□□□ 0.44
SCAP-209ENST00000465628 RFC2P35250 354 aa17.78■□□□□ 0.44
SCAP-209ENST00000465628 TOB2Q14106 344 aaPredicted RBP17.78■□□□□ 0.44
SCAP-209ENST00000465628 C16orf59Q7L2K0 433 aa17.78■□□□□ 0.44
SCAP-209ENST00000465628 TEX2Q8IWB9 1127 aa17.78■□□□□ 0.44
SCAP-209ENST00000465628 REXO1Q8N1G1 1221 aaKnown RBP17.78■□□□□ 0.44
SCAP-209ENST00000465628 AFAP1L1Q8TED9 768 aa17.78■□□□□ 0.44
SCAP-209ENST00000465628 GPR20Q99678 358 aa17.78■□□□□ 0.44
SCAP-209ENST00000465628 SDF4Q9BRK5 362 aa17.78■□□□□ 0.44
SCAP-209ENST00000465628 RNF26Q9BY78 433 aaPredicted RBP17.78■□□□□ 0.44
SCAP-209ENST00000465628 TM6SF1Q9BZW5 370 aa17.78■□□□□ 0.44
SCAP-209ENST00000465628 TUT1Q9H6E5 874 aaKnown RBP17.78■□□□□ 0.44
SCAP-209ENST00000465628 BCAS3Q9H6U6 928 aa17.78■□□□□ 0.44
SCAP-209ENST00000465628 JADE2Q9NQC1 790 aa17.78■□□□□ 0.44
SCAP-209ENST00000465628 UBIAD1Q9Y5Z9 338 aa17.78■□□□□ 0.44
SCAP-209ENST00000465628 TRIP12Q14669 1992 aaPredicted RBP17.77■□□□□ 0.44
SCAP-209ENST00000465628 C17orf102A2RUQ5 167 aa17.77■□□□□ 0.44
SCAP-209ENST00000465628 HAS3O00219 553 aa17.77■□□□□ 0.44
SCAP-209ENST00000465628 KCNA2P16389 499 aa17.77■□□□□ 0.44
SCAP-209ENST00000465628 DNAJB2P25686 324 aa17.77■□□□□ 0.44
SCAP-209ENST00000465628 GNA11P29992 359 aa17.77■□□□□ 0.44
SCAP-209ENST00000465628 LRRC8DQ7L1W4 858 aa17.77■□□□□ 0.44
SCAP-209ENST00000465628 HERVK_113Q902F9 699 aa17.77■□□□□ 0.44
SCAP-209ENST00000465628 C16orf70Q9BSU1 422 aa17.77■□□□□ 0.44
SCAP-209ENST00000465628 JPH1Q9HDC5 661 aaPredicted RBP17.77■□□□□ 0.44
SCAP-209ENST00000465628 MTMR10Q9NXD2 777 aa17.77■□□□□ 0.44
SCAP-209ENST00000465628 IQCF3P0C7M6 154 aa17.76■□□□□ 0.43
SCAP-209ENST00000465628 SMIM10L2AP0DMW4 78 aa17.76■□□□□ 0.43
SCAP-209ENST00000465628 SMIM10L2BP0DMW5 78 aa17.76■□□□□ 0.43
SCAP-209ENST00000465628 SELPP16109 830 aa17.76■□□□□ 0.43
SCAP-209ENST00000465628 IFNAR1P17181 557 aa17.76■□□□□ 0.43
SCAP-209ENST00000465628 TCF7P36402 384 aaPredicted RBP17.76■□□□□ 0.43
SCAP-209ENST00000465628 SREBF1P36956 1147 aa17.76■□□□□ 0.43
SCAP-209ENST00000465628 SSRP1Q08945 709 aaKnown RBP17.76■□□□□ 0.43
SCAP-209ENST00000465628 PTK7Q13308 1070 aa17.76■□□□□ 0.43
SCAP-209ENST00000465628 FAM109BQ6ICB4 259 aaPredicted RBP17.76■□□□□ 0.43
SCAP-209ENST00000465628 BICD2Q8TD16 824 aa17.76■□□□□ 0.43
SCAP-209ENST00000465628 GLG1Q92896 1179 aa17.76■□□□□ 0.43
SCAP-209ENST00000465628 ATP6V0A1Q93050 837 aa17.76■□□□□ 0.43
SCAP-209ENST00000465628 TIFAQ96CG3 184 aa17.76■□□□□ 0.43
SCAP-209ENST00000465628 MXRA8Q9BRK3 442 aa17.76■□□□□ 0.43
SCAP-209ENST00000465628 CXXC1Q9P0U4 656 aaPredicted RBP17.76■□□□□ 0.43
SCAP-209ENST00000465628 VPS54Q9P1Q0 977 aa17.76■□□□□ 0.43
SCAP-209ENST00000465628 TCEAL9Q9UHQ7 104 aa17.76■□□□□ 0.43
SCAP-209ENST00000465628 SLC4A7Q9Y6M7 1214 aa17.76■□□□□ 0.43
SCAP-209ENST00000465628 ESYT2A0FGR8 921 aa17.75■□□□□ 0.43
SCAP-209ENST00000465628 GRXCR1A8MXD5 290 aa17.75■□□□□ 0.43
SCAP-209ENST00000465628 ATP9AO75110 1047 aa17.75■□□□□ 0.43
SCAP-209ENST00000465628 GNAT1P11488 350 aa17.75■□□□□ 0.43
SCAP-209ENST00000465628 MARK3P27448 753 aa17.75■□□□□ 0.43
SCAP-209ENST00000465628 ARHGAP4P98171 946 aa17.75■□□□□ 0.43
SCAP-209ENST00000465628 ZNF200P98182 395 aaPredicted RBP17.75■□□□□ 0.43
SCAP-209ENST00000465628 CEP55Q53EZ4 464 aa17.75■□□□□ 0.43
SCAP-209ENST00000465628 KCNH7Q9NS40 1196 aa17.75■□□□□ 0.43
SCAP-209ENST00000465628 MSRAQ9UJ68 235 aa17.75■□□□□ 0.43
SCAP-209ENST00000465628 DDX39AO00148 427 aaKnown RBP17.74■□□□□ 0.43
SCAP-209ENST00000465628 MAFGO15525 162 aa17.74■□□□□ 0.43
SCAP-209ENST00000465628 CDKL5O76039 1030 aa17.74■□□□□ 0.43
SCAP-209ENST00000465628 CKBP12277 381 aa17.74■□□□□ 0.43
SCAP-209ENST00000465628 THPOP40225 353 aa17.74■□□□□ 0.43
SCAP-209ENST00000465628 EVCP57679 992 aa17.74■□□□□ 0.43
SCAP-209ENST00000465628 NLRP5P59047 1200 aa17.74■□□□□ 0.43
SCAP-209ENST00000465628 ANAPC15P60006 121 aa17.74■□□□□ 0.43
SCAP-209ENST00000465628 RAB30Q15771 203 aa17.74■□□□□ 0.43
SCAP-209ENST00000465628 PKN1Q16512 942 aa17.74■□□□□ 0.43
SCAP-209ENST00000465628 MCTP2Q6DN12 878 aa17.74■□□□□ 0.43
SCAP-209ENST00000465628 CYP2W1Q8TAV3 490 aa17.74■□□□□ 0.43
SCAP-209ENST00000465628 RASGRP4Q8TDF6 673 aa17.74■□□□□ 0.43
SCAP-209ENST00000465628 SEPT1Q8WYJ6 367 aa17.74■□□□□ 0.43
SCAP-209ENST00000465628 DHX38Q92620 1227 aaKnown RBP17.74■□□□□ 0.43
SCAP-209ENST00000465628 ZNF274Q96GC6 653 aaPredicted RBP17.74■□□□□ 0.43
SCAP-209ENST00000465628 ZMYND12Q9H0C1 365 aa17.74■□□□□ 0.43
SCAP-209ENST00000465628 SLKQ9H2G2 1235 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms