RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 C7orf61Q8IZ16 206 aa14.09□□□□□ -0.15
CHPF2-202ENST00000465601 PPTC7Q8NI37 304 aa14.09□□□□□ -0.15
CHPF2-202ENST00000465601 MTG1Q9BT17 334 aaPredicted RBP14.09□□□□□ -0.15
CHPF2-202ENST00000465601 BRMS1Q9HCU9 246 aa14.09□□□□□ -0.15
CHPF2-202ENST00000465601 ATP11BQ9Y2G3 1177 aa14.09□□□□□ -0.15
CHPF2-202ENST00000465601 IGLV3-22A0A075B6J6 115 aa14.08□□□□□ -0.16
CHPF2-202ENST00000465601 A0A0U1RQG5 324 aaPredicted RBP14.08□□□□□ -0.16
CHPF2-202ENST00000465601 BTBD18B2RXH4 712 aa14.08□□□□□ -0.16
CHPF2-202ENST00000465601 CIITAP33076 1130 aa14.08□□□□□ -0.16
CHPF2-202ENST00000465601 CHMP4BP1P59074 171 aa14.08□□□□□ -0.16
CHPF2-202ENST00000465601 ITGA7Q13683 1181 aa14.08□□□□□ -0.16
CHPF2-202ENST00000465601 SNX17Q15036 470 aa14.08□□□□□ -0.16
CHPF2-202ENST00000465601 DGKDQ16760 1214 aa14.08□□□□□ -0.16
CHPF2-202ENST00000465601 PRR16Q569H4 304 aa14.08□□□□□ -0.16
CHPF2-202ENST00000465601 EARS2Q5JPH6 523 aaKnown RBP14.08□□□□□ -0.16
CHPF2-202ENST00000465601 PIK3AP1Q6ZUJ8 805 aa14.08□□□□□ -0.16
CHPF2-202ENST00000465601 DIS3L2Q8IYB7 885 aaKnown RBP14.08□□□□□ -0.16
CHPF2-202ENST00000465601 GIMAP8Q8ND71 665 aaPredicted RBP14.08□□□□□ -0.16
CHPF2-202ENST00000465601 PPP1R13LQ8WUF5 828 aa14.08□□□□□ -0.16
CHPF2-202ENST00000465601 AGO4Q9HCK5 861 aaKnown RBP14.08□□□□□ -0.16
CHPF2-202ENST00000465601 GRIN2DO15399 1336 aa14.08□□□□□ -0.16
CHPF2-202ENST00000465601 FAM205CA6NFA0 338 aa14.07□□□□□ -0.16
CHPF2-202ENST00000465601 ARVCFO00192 962 aa14.07□□□□□ -0.16
CHPF2-202ENST00000465601 NOP56O00567 594 aaKnown RBP14.07□□□□□ -0.16
CHPF2-202ENST00000465601 PQBP1O60828 265 aaKnown RBP14.07□□□□□ -0.16
CHPF2-202ENST00000465601 PPFIA4O75335 1185 aa14.07□□□□□ -0.16
CHPF2-202ENST00000465601 GJB2P29033 226 aa14.07□□□□□ -0.16
CHPF2-202ENST00000465601 CDK7P50613 346 aa14.07□□□□□ -0.16
CHPF2-202ENST00000465601 TLE2Q04725 743 aa14.07□□□□□ -0.16
CHPF2-202ENST00000465601 ITGB3BPQ13352 177 aaPredicted RBP14.07□□□□□ -0.16
CHPF2-202ENST00000465601 C1orf53Q5VUE5 145 aa14.07□□□□□ -0.16
CHPF2-202ENST00000465601 FBXO18Q8NFZ0 1043 aa14.07□□□□□ -0.16
CHPF2-202ENST00000465601 TNFRSF25Q93038 417 aa14.07□□□□□ -0.16
CHPF2-202ENST00000465601 GPR20Q99678 358 aa14.07□□□□□ -0.16
CHPF2-202ENST00000465601 SMC3Q9UQE7 1217 aa14.07□□□□□ -0.16
CHPF2-202ENST00000465601 NR2E3Q9Y5X4 410 aa14.07□□□□□ -0.16
CHPF2-202ENST00000465601 MYH9P35579 1960 aaKnown RBP14.06□□□□□ -0.16
CHPF2-202ENST00000465601 TDP2O95551 362 aa14.06□□□□□ -0.16
CHPF2-202ENST00000465601 ZNF286BP0CG31 522 aa14.06□□□□□ -0.16
CHPF2-202ENST00000465601 HOXD8P13378 290 aaPredicted RBP14.06□□□□□ -0.16
CHPF2-202ENST00000465601 CUL4AQ13619 759 aa14.06□□□□□ -0.16
CHPF2-202ENST00000465601 SAFBQ15424 915 aaKnown RBP eCLIP14.06□□□□□ -0.16
CHPF2-202ENST00000465601 LETM2Q2VYF4 491 aa14.06□□□□□ -0.16
CHPF2-202ENST00000465601 NBPF20Q3BBV1 942 aa14.06□□□□□ -0.16
CHPF2-202ENST00000465601 KAT2BQ92831 832 aa14.06□□□□□ -0.16
CHPF2-202ENST00000465601 SDF4Q9BRK5 362 aa14.06□□□□□ -0.16
CHPF2-202ENST00000465601 ZNF577Q9BSK1 485 aa14.06□□□□□ -0.16
CHPF2-202ENST00000465601 PCDH10Q9P2E7 1040 aa14.06□□□□□ -0.16
CHPF2-202ENST00000465601 ZMYND8Q9ULU4 1186 aaPredicted RBP14.06□□□□□ -0.16
CHPF2-202ENST00000465601 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.06□□□□□ -0.16
CHPF2-202ENST00000465601 CYP3A7-CYP3A51PA0A087WV96 503 aa14.05□□□□□ -0.16
CHPF2-202ENST00000465601 GSTTP1A0A1W2PQM5 241 aa14.05□□□□□ -0.16
CHPF2-202ENST00000465601 H0YGN5 161 aa14.05□□□□□ -0.16
CHPF2-202ENST00000465601 DDX39AO00148 427 aaKnown RBP14.05□□□□□ -0.16
CHPF2-202ENST00000465601 IPO5O00410 1097 aaKnown RBP14.05□□□□□ -0.16
CHPF2-202ENST00000465601 SYN1P17600 705 aa14.05□□□□□ -0.16
CHPF2-202ENST00000465601 CYP3A7P24462 503 aa14.05□□□□□ -0.16
CHPF2-202ENST00000465601 SETQ01105 290 aaPredicted RBP14.05□□□□□ -0.16
CHPF2-202ENST00000465601 UTP14CQ5TAP6 766 aaKnown RBP14.05□□□□□ -0.16
CHPF2-202ENST00000465601 NEK8Q86SG6 692 aa14.05□□□□□ -0.16
CHPF2-202ENST00000465601 SLC43A3Q8NBI5 491 aa14.05□□□□□ -0.16
CHPF2-202ENST00000465601 SEPT1Q8WYJ6 367 aa14.05□□□□□ -0.16
CHPF2-202ENST00000465601 SNX21Q969T3 373 aa14.05□□□□□ -0.16
CHPF2-202ENST00000465601 LENG9Q96B70 501 aa14.05□□□□□ -0.16
CHPF2-202ENST00000465601 JPH1Q9HDC5 661 aaPredicted RBP14.05□□□□□ -0.16
CHPF2-202ENST00000465601 SLC9A2Q9UBY0 812 aa14.05□□□□□ -0.16
CHPF2-202ENST00000465601 KIF3AQ9Y496 699 aa14.05□□□□□ -0.16
CHPF2-202ENST00000465601 NFASCO94856 1347 aa14.05□□□□□ -0.16
CHPF2-202ENST00000465601 WDR81Q562E7 1941 aa14.05□□□□□ -0.16
CHPF2-202ENST00000465601 DCDC2CA8MYV0 355 aa14.04□□□□□ -0.16
CHPF2-202ENST00000465601 K7ELQ4 463 aaPredicted RBP14.04□□□□□ -0.16
CHPF2-202ENST00000465601 MSH4O15457 936 aa14.04□□□□□ -0.16
CHPF2-202ENST00000465601 DHX15O43143 795 aaKnown RBP14.04□□□□□ -0.16
CHPF2-202ENST00000465601 LGALS2P05162 132 aa14.04□□□□□ -0.16
CHPF2-202ENST00000465601 PSEN2P49810 448 aa14.04□□□□□ -0.16
CHPF2-202ENST00000465601 MFSD10Q14728 455 aa14.04□□□□□ -0.16
CHPF2-202ENST00000465601 Q4G0T1 1027 aa14.04□□□□□ -0.16
CHPF2-202ENST00000465601 FAM47CQ5HY64 1035 aa14.04□□□□□ -0.16
CHPF2-202ENST00000465601 ANKRD33Q7Z3H0 272 aa14.04□□□□□ -0.16
CHPF2-202ENST00000465601 SH3RF1Q7Z6J0 888 aa14.04□□□□□ -0.16
CHPF2-202ENST00000465601 GJA10Q969M2 543 aa14.04□□□□□ -0.16
CHPF2-202ENST00000465601 MBOAT7Q96N66 472 aa14.04□□□□□ -0.16
CHPF2-202ENST00000465601 TOX2Q96NM4 488 aa14.04□□□□□ -0.16
CHPF2-202ENST00000465601 C16orf70Q9BSU1 422 aa14.04□□□□□ -0.16
CHPF2-202ENST00000465601 DDX25Q9UHL0 483 aaKnown RBP14.04□□□□□ -0.16
CHPF2-202ENST00000465601 TRIOBPQ9H2D6 2365 aa14.04□□□□□ -0.16
CHPF2-202ENST00000465601 SLC37A4O43826 429 aa14.03□□□□□ -0.16
CHPF2-202ENST00000465601 CCNT1O60563 726 aaKnown RBP14.03□□□□□ -0.16
CHPF2-202ENST00000465601 F2P00734 622 aa14.03□□□□□ -0.16
CHPF2-202ENST00000465601 ATP2B1P20020 1258 aa14.03□□□□□ -0.16
CHPF2-202ENST00000465601 TCF7P36402 384 aaPredicted RBP14.03□□□□□ -0.16
CHPF2-202ENST00000465601 ACTR2P61160 394 aa14.03□□□□□ -0.16
CHPF2-202ENST00000465601 FAAP100Q0VG06 881 aa14.03□□□□□ -0.16
CHPF2-202ENST00000465601 GNL2Q13823 731 aaKnown RBP14.03□□□□□ -0.16
CHPF2-202ENST00000465601 KIAA0753Q2KHM9 967 aa14.03□□□□□ -0.16
CHPF2-202ENST00000465601 NFRKBQ6P4R8 1299 aa14.03□□□□□ -0.16
CHPF2-202ENST00000465601 MOXD1Q6UVY6 613 aa14.03□□□□□ -0.16
CHPF2-202ENST00000465601 TRIM50Q86XT4 487 aa14.03□□□□□ -0.16
CHPF2-202ENST00000465601 FAM126BQ8IXS8 530 aa14.03□□□□□ -0.16
CHPF2-202ENST00000465601 SEZ6LQ9BYH1 1024 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms