RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 ERICH2A1L162 156 aa26.17■■□□□ 1.78
USP4-208ENST00000464168 SMIM10L2AP0DMW4 78 aa26.17■■□□□ 1.78
USP4-208ENST00000464168 SMIM10L2BP0DMW5 78 aa26.17■■□□□ 1.78
USP4-208ENST00000464168 CHMLP26374 656 aa26.17■■□□□ 1.78
USP4-208ENST00000464168 ICAM3P32942 547 aa26.17■■□□□ 1.78
USP4-208ENST00000464168 WTAPQ15007 396 aa26.17■■□□□ 1.78
USP4-208ENST00000464168 PLEKHG4Q58EX7 1191 aa26.17■■□□□ 1.78
USP4-208ENST00000464168 RUFY2Q8WXA3 655 aa26.17■■□□□ 1.78
USP4-208ENST00000464168 INPP4AQ96PE3 977 aaPredicted RBP26.17■■□□□ 1.78
USP4-208ENST00000464168 C1QTNF1Q9BXJ1 281 aa26.17■■□□□ 1.78
USP4-208ENST00000464168 RNPEPQ9H4A4 650 aa26.17■■□□□ 1.78
USP4-208ENST00000464168 COL4A4P53420 1690 aaPredicted RBP26.16■■□□□ 1.78
USP4-208ENST00000464168 SPATA31C2B4DYI2 1134 aa26.16■■□□□ 1.78
USP4-208ENST00000464168 E7EWF7 191 aa26.16■■□□□ 1.78
USP4-208ENST00000464168 TREHO43280 583 aa26.16■■□□□ 1.78
USP4-208ENST00000464168 SEMA3FQ13275 785 aa26.16■■□□□ 1.78
USP4-208ENST00000464168 GNPTABQ3T906 1256 aa26.16■■□□□ 1.78
USP4-208ENST00000464168 STAM2O75886 525 aa26.15■■□□□ 1.78
USP4-208ENST00000464168 AMHP03971 560 aa26.15■■□□□ 1.78
USP4-208ENST00000464168 HTRA4P83105 476 aaPredicted RBP26.15■■□□□ 1.78
USP4-208ENST00000464168 SART3Q15020 963 aaKnown RBP26.15■■□□□ 1.78
USP4-208ENST00000464168 METTL7BQ6UX53 244 aa26.15■■□□□ 1.78
USP4-208ENST00000464168 RALYLQ86SE5 291 aaKnown RBP26.15■■□□□ 1.78
USP4-208ENST00000464168 MYOCDQ8IZQ8 938 aa26.15■■□□□ 1.78
USP4-208ENST00000464168 NCOA7Q8NI08 942 aa26.15■■□□□ 1.78
USP4-208ENST00000464168 PIBF1Q8WXW3 757 aa26.15■■□□□ 1.78
USP4-208ENST00000464168 USP26Q9BXU7 913 aa26.15■■□□□ 1.78
USP4-208ENST00000464168 OSBPL7Q9BZF2 842 aa26.15■■□□□ 1.78
USP4-208ENST00000464168 RTEL1Q9NZ71 1219 aa26.15■■□□□ 1.78
USP4-208ENST00000464168 NOP56O00567 594 aaKnown RBP26.14■■□□□ 1.78
USP4-208ENST00000464168 ANTXR2P58335 489 aa26.14■■□□□ 1.78
USP4-208ENST00000464168 NEDD9Q14511 834 aa26.14■■□□□ 1.78
USP4-208ENST00000464168 CYFIP1Q7L576 1253 aa26.14■■□□□ 1.78
USP4-208ENST00000464168 CATIPQ7Z7H3 387 aa26.14■■□□□ 1.78
USP4-208ENST00000464168 IGDCC4Q8TDY8 1250 aa26.14■■□□□ 1.78
USP4-208ENST00000464168 GPR20Q99678 358 aa26.14■■□□□ 1.78
USP4-208ENST00000464168 C17orf80Q9BSJ5 609 aa26.14■■□□□ 1.78
USP4-208ENST00000464168 EPHX3Q9H6B9 360 aa26.14■■□□□ 1.78
USP4-208ENST00000464168 TELO2Q9Y4R8 837 aa26.14■■□□□ 1.78
USP4-208ENST00000464168 SP7Q8TDD2 431 aaPredicted RBP26.13■■□□□ 1.77
USP4-208ENST00000464168 SETD4Q9NVD3 440 aa26.13■■□□□ 1.77
USP4-208ENST00000464168 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.12■■□□□ 1.77
USP4-208ENST00000464168 CAND2O75155 1236 aa26.12■■□□□ 1.77
USP4-208ENST00000464168 FBXO22Q8NEZ5 403 aa26.12■■□□□ 1.77
USP4-208ENST00000464168 SEPT8Q92599 483 aa26.12■■□□□ 1.77
USP4-208ENST00000464168 SGSM2O43147 1006 aa26.11■■□□□ 1.77
USP4-208ENST00000464168 FIBPO43427 364 aa26.11■■□□□ 1.77
USP4-208ENST00000464168 CTSHP09668 335 aa26.11■■□□□ 1.77
USP4-208ENST00000464168 USP17L6PQ6QN14 398 aa26.11■■□□□ 1.77
USP4-208ENST00000464168 TRIM50Q86XT4 487 aa26.11■■□□□ 1.77
USP4-208ENST00000464168 MB21D2Q8IYB1 491 aaPredicted RBP26.11■■□□□ 1.77
USP4-208ENST00000464168 UBE2ZQ9H832 354 aaPredicted RBP26.11■■□□□ 1.77
USP4-208ENST00000464168 GNAT1P11488 350 aa26.1■■□□□ 1.77
USP4-208ENST00000464168 ADAM17P78536 824 aa26.1■■□□□ 1.77
USP4-208ENST00000464168 KHSRPQ92945 711 aaKnown RBP eCLIP26.1■■□□□ 1.77
USP4-208ENST00000464168 TOP1MTQ969P6 601 aa26.1■■□□□ 1.77
USP4-208ENST00000464168 MAP3K14Q99558 947 aa26.1■■□□□ 1.77
USP4-208ENST00000464168 SPZ1Q9BXG8 430 aa26.1■■□□□ 1.77
USP4-208ENST00000464168 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.09■■□□□ 1.77
USP4-208ENST00000464168 MEIS2O14770 477 aa26.09■■□□□ 1.77
USP4-208ENST00000464168 PCNX4Q63HM2 1172 aa26.09■■□□□ 1.77
USP4-208ENST00000464168 MAP4K1Q92918 833 aa26.09■■□□□ 1.77
USP4-208ENST00000464168 SENP7Q9BQF6 1050 aa26.09■■□□□ 1.77
USP4-208ENST00000464168 MYL10Q9BUA6 226 aa26.09■■□□□ 1.77
USP4-208ENST00000464168 MICAL3Q7RTP6 2002 aa26.09■■□□□ 1.77
USP4-208ENST00000464168 PIK3CDO00329 1044 aa26.08■■□□□ 1.77
USP4-208ENST00000464168 EPC2Q52LR7 807 aa26.08■■□□□ 1.77
USP4-208ENST00000464168 UTP14CQ5TAP6 766 aaKnown RBP26.08■■□□□ 1.77
USP4-208ENST00000464168 XRRA1Q6P2D8 792 aa26.08■■□□□ 1.77
USP4-208ENST00000464168 SMARCC2Q8TAQ2 1214 aa26.08■■□□□ 1.77
USP4-208ENST00000464168 RRP36Q96EU6 259 aaKnown RBP26.08■■□□□ 1.77
USP4-208ENST00000464168 LRFN3Q9BTN0 628 aa26.08■■□□□ 1.77
USP4-208ENST00000464168 LY9Q9HBG7 655 aa26.08■■□□□ 1.77
USP4-208ENST00000464168 CD320Q9NPF0 282 aa26.08■■□□□ 1.77
USP4-208ENST00000464168 SIP14410 1827 aa26.08■■□□□ 1.77
USP4-208ENST00000464168 SMARCA1P28370 1054 aa26.07■■□□□ 1.76
USP4-208ENST00000464168 LEXMQ3ZCV2 418 aa26.07■■□□□ 1.76
USP4-208ENST00000464168 FAM26DQ5JW98 314 aa26.07■■□□□ 1.76
USP4-208ENST00000464168 ZNF654Q8IZM8 581 aa26.07■■□□□ 1.76
USP4-208ENST00000464168 LMBR1Q8WVP7 490 aa26.07■■□□□ 1.76
USP4-208ENST00000464168 CUL5Q93034 780 aa26.07■■□□□ 1.76
USP4-208ENST00000464168 MRPL38Q96DV4 380 aaKnown RBP26.07■■□□□ 1.76
USP4-208ENST00000464168 YME1L1Q96TA2 773 aa26.07■■□□□ 1.76
USP4-208ENST00000464168 ZNF215Q9UL58 517 aaPredicted RBP26.07■■□□□ 1.76
USP4-208ENST00000464168 DDAH1O94760 285 aa26.06■■□□□ 1.76
USP4-208ENST00000464168 UPP2O95045 317 aa26.06■■□□□ 1.76
USP4-208ENST00000464168 PLA2G5P39877 138 aa26.06■■□□□ 1.76
USP4-208ENST00000464168 ARHGAP4P98171 946 aa26.06■■□□□ 1.76
USP4-208ENST00000464168 SP4Q02446 784 aa26.06■■□□□ 1.76
USP4-208ENST00000464168 CTCFLQ8NI51 663 aaPredicted RBP26.06■■□□□ 1.76
USP4-208ENST00000464168 SAMD11Q96NU1 681 aa26.06■■□□□ 1.76
USP4-208ENST00000464168 RBM8AQ9Y5S9 174 aaKnown RBP26.06■■□□□ 1.76
USP4-208ENST00000464168 KCNA5P22460 613 aa26.05■■□□□ 1.76
USP4-208ENST00000464168 KIF5BP33176 963 aa26.05■■□□□ 1.76
USP4-208ENST00000464168 NLRX1Q86UT6 975 aa26.05■■□□□ 1.76
USP4-208ENST00000464168 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.05■■□□□ 1.76
USP4-208ENST00000464168 SUPT16HQ9Y5B9 1047 aaKnown RBP26.05■■□□□ 1.76
USP4-208ENST00000464168 H3BNC9 293 aa26.04■■□□□ 1.76
USP4-208ENST00000464168 ATP9AO75110 1047 aa26.04■■□□□ 1.76
USP4-208ENST00000464168 CHRNA1P02708 482 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms